RNA–Protein interactions for RNA: ENST00000555172.5

KTN1-220, Transcript of kinectin 1, humanhuman

TSL 2

Gene KTN1, Length 1,985 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-220ENST00000555172 CCDC39Q9UFE4 941 aa4.84□□□□□ -1.64
KTN1-220ENST00000555172 B2RBV5 119 aa4.83□□□□□ -1.64
KTN1-220ENST00000555172 SART1O43290 800 aaKnown RBP4.83□□□□□ -1.64
KTN1-220ENST00000555172 GREM1O60565 184 aa4.83□□□□□ -1.64
KTN1-220ENST00000555172 EPHA1P21709 976 aa4.83□□□□□ -1.64
KTN1-220ENST00000555172 ZNF157P51786 506 aaPredicted RBP4.83□□□□□ -1.64
KTN1-220ENST00000555172 NEK2P51955 445 aa4.83□□□□□ -1.64
KTN1-220ENST00000555172 NEK3P51956 506 aa4.83□□□□□ -1.64
KTN1-220ENST00000555172 PCDH1Q08174 1060 aa4.83□□□□□ -1.64
KTN1-220ENST00000555172 FAAP100Q0VG06 881 aa4.83□□□□□ -1.64
KTN1-220ENST00000555172 LRRC14Q15048 493 aa4.83□□□□□ -1.64
KTN1-220ENST00000555172 TMEM95Q3KNT9 176 aa4.83□□□□□ -1.64
KTN1-220ENST00000555172 ZNF648Q5T619 568 aaPredicted RBP4.83□□□□□ -1.64
KTN1-220ENST00000555172 LARP1BQ659C4 914 aaKnown RBP4.83□□□□□ -1.64
KTN1-220ENST00000555172 CBLL1Q75N03 491 aa4.83□□□□□ -1.64
KTN1-220ENST00000555172 RNF180Q86T96 592 aa4.83□□□□□ -1.64
KTN1-220ENST00000555172 NIM1KQ8IY84 436 aa4.83□□□□□ -1.64
KTN1-220ENST00000555172 SPICE1Q8N0Z3 855 aa4.83□□□□□ -1.64
KTN1-220ENST00000555172 ENOX1Q8TC92 643 aaKnown RBP4.83□□□□□ -1.64
KTN1-220ENST00000555172 THAP3Q8WTV1 239 aaPredicted RBP4.83□□□□□ -1.64
KTN1-220ENST00000555172 NKD1Q969G9 470 aa4.83□□□□□ -1.64
KTN1-220ENST00000555172 MIR1-1HGQ9H1L0 117 aa4.83□□□□□ -1.64
KTN1-220ENST00000555172 TNKS2Q9H2K2 1166 aa4.83□□□□□ -1.64
KTN1-220ENST00000555172 JADE2Q9NQC1 790 aa4.83□□□□□ -1.64
KTN1-220ENST00000555172 TPX2Q9ULW0 747 aaKnown RBP4.83□□□□□ -1.64
KTN1-220ENST00000555172 ANGEL1Q9UNK9 670 aaKnown RBP4.83□□□□□ -1.64
KTN1-220ENST00000555172 PLAAQ9Y263 795 aa4.83□□□□□ -1.64
KTN1-220ENST00000555172 ROBO2Q9HCK4 1378 aa4.82□□□□□ -1.64
KTN1-220ENST00000555172 ALG1L2C9J202 215 aa4.82□□□□□ -1.64
KTN1-220ENST00000555172 PAGE1O75459 146 aa4.82□□□□□ -1.64
KTN1-220ENST00000555172 F13BP05160 661 aa4.82□□□□□ -1.64
KTN1-220ENST00000555172 SRGNP10124 158 aa4.82□□□□□ -1.64
KTN1-220ENST00000555172 TFE3P19532 575 aaPredicted RBP4.82□□□□□ -1.64
KTN1-220ENST00000555172 CABP4P57796 275 aa4.82□□□□□ -1.64
KTN1-220ENST00000555172 MTMR1Q13613 665 aa4.82□□□□□ -1.64
KTN1-220ENST00000555172 FAM83BQ5T0W9 1011 aa4.82□□□□□ -1.64
KTN1-220ENST00000555172 LCE5AQ5TCM9 118 aa4.82□□□□□ -1.64
KTN1-220ENST00000555172 RINLQ6ZS11 566 aa4.82□□□□□ -1.64
KTN1-220ENST00000555172 LHFPL2Q6ZUX7 228 aa4.82□□□□□ -1.64
KTN1-220ENST00000555172 CCDC84Q86UT8 332 aaPredicted RBP4.82□□□□□ -1.64
KTN1-220ENST00000555172 TP53INP2Q8IXH6 220 aa4.82□□□□□ -1.64
KTN1-220ENST00000555172 CACTIN-AS1Q8N1I8 211 aa4.82□□□□□ -1.64
KTN1-220ENST00000555172 VPS37AQ8NEZ2 397 aa4.82□□□□□ -1.64
KTN1-220ENST00000555172 MTMR8Q96EF0 704 aa4.82□□□□□ -1.64
KTN1-220ENST00000555172 MFSD3Q96ES6 412 aa4.82□□□□□ -1.64
KTN1-220ENST00000555172 KCNG1Q9UIX4 513 aa4.82□□□□□ -1.64
KTN1-220ENST00000555172 MCM8Q9UJA3 840 aa4.82□□□□□ -1.64
KTN1-220ENST00000555172 CYP8B1Q9UNU6 501 aa4.82□□□□□ -1.64
KTN1-220ENST00000555172 SLC26A4O43511 780 aa4.82□□□□□ -1.64
KTN1-220ENST00000555172 B3GALT4O96024 378 aa4.82□□□□□ -1.64
KTN1-220ENST00000555172 GARTP22102 1010 aa4.82□□□□□ -1.64
KTN1-220ENST00000555172 NME2P22392 152 aa4.82□□□□□ -1.64
KTN1-220ENST00000555172 PIN1Q13526 163 aaPredicted RBP4.82□□□□□ -1.64
KTN1-220ENST00000555172 MAPRE1Q15691 268 aaKnown RBP4.82□□□□□ -1.64
KTN1-220ENST00000555172 MSMPQ1L6U9 139 aa4.82□□□□□ -1.64
KTN1-220ENST00000555172 SGO2Q562F6 1265 aa4.82□□□□□ -1.64
KTN1-220ENST00000555172 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.82□□□□□ -1.64
KTN1-220ENST00000555172 FAM196AQ6ZSG2 479 aa4.82□□□□□ -1.64
KTN1-220ENST00000555172 PPP1R3FQ6ZSY5 799 aaPredicted RBP4.82□□□□□ -1.64
KTN1-220ENST00000555172 STRA8Q7Z7C7 330 aa4.82□□□□□ -1.64
KTN1-220ENST00000555172 IFNL3Q8IZI9 196 aa4.82□□□□□ -1.64
KTN1-220ENST00000555172 DCAF11Q8TEB1 546 aa4.82□□□□□ -1.64
KTN1-220ENST00000555172 EMILIN2Q9BXX0 1053 aa4.82□□□□□ -1.64
KTN1-220ENST00000555172 CAAP1Q9H8G2 361 aa4.82□□□□□ -1.64
KTN1-220ENST00000555172 GJB6O95452 261 aa4.81□□□□□ -1.64
KTN1-220ENST00000555172 F2P00734 622 aa4.81□□□□□ -1.64
KTN1-220ENST00000555172 PMLP29590 882 aa4.81□□□□□ -1.64
KTN1-220ENST00000555172 IKBKEQ14164 716 aa4.81□□□□□ -1.64
KTN1-220ENST00000555172 MLC1Q15049 377 aa4.81□□□□□ -1.64
KTN1-220ENST00000555172 CWF19L2Q2TBE0 894 aaKnown RBP4.81□□□□□ -1.64
KTN1-220ENST00000555172 JMYQ8N9B5 988 aa4.81□□□□□ -1.64
KTN1-220ENST00000555172 ATL2Q8NHH9 583 aa4.81□□□□□ -1.64
KTN1-220ENST00000555172 JARID2Q92833 1246 aaPredicted RBP4.81□□□□□ -1.64
KTN1-220ENST00000555172 HOOK2Q96ED9 719 aa4.81□□□□□ -1.64
KTN1-220ENST00000555172 ASIC4Q96FT7 647 aa4.81□□□□□ -1.64
KTN1-220ENST00000555172 ADAM19Q9H013 955 aa4.81□□□□□ -1.64
KTN1-220ENST00000555172 ZNF700Q9H0M5 742 aa4.81□□□□□ -1.64
KTN1-220ENST00000555172 CDH19Q9H159 772 aa4.81□□□□□ -1.64
KTN1-220ENST00000555172 CBX8Q9HC52 389 aa4.81□□□□□ -1.64
KTN1-220ENST00000555172 ACTR10Q9NZ32 417 aa4.81□□□□□ -1.64
KTN1-220ENST00000555172 SOX13Q9UN79 622 aa4.81□□□□□ -1.64
KTN1-220ENST00000555172 PIP5K1CO60331 668 aa4.8□□□□□ -1.64
KTN1-220ENST00000555172 EIF4EBP3O60516 100 aaPredicted RBP4.8□□□□□ -1.64
KTN1-220ENST00000555172 IFIT2P09913 472 aaKnown RBP4.8□□□□□ -1.64
KTN1-220ENST00000555172 ARNTP27540 789 aa4.8□□□□□ -1.64
KTN1-220ENST00000555172 MAN1A1P33908 653 aa4.8□□□□□ -1.64
KTN1-220ENST00000555172 NLRP12P59046 1061 aa4.8□□□□□ -1.64
KTN1-220ENST00000555172 SSRP1Q08945 709 aaKnown RBP4.8□□□□□ -1.64
KTN1-220ENST00000555172 KCTD2Q14681 263 aa4.8□□□□□ -1.64
KTN1-220ENST00000555172 SLC4A8Q2Y0W8 1093 aa4.8□□□□□ -1.64
KTN1-220ENST00000555172 SEZ6Q53EL9 994 aa4.8□□□□□ -1.64
KTN1-220ENST00000555172 TNNI3KQ59H18 835 aa4.8□□□□□ -1.64
KTN1-220ENST00000555172 LLGL2Q6P1M3 1020 aa4.8□□□□□ -1.64
KTN1-220ENST00000555172 VN1R5Q7Z5H4 357 aa4.8□□□□□ -1.64
KTN1-220ENST00000555172 SLITRK4Q8IW52 837 aa4.8□□□□□ -1.64
KTN1-220ENST00000555172 SULF2Q8IWU5 870 aa4.8□□□□□ -1.64
KTN1-220ENST00000555172 AFAP1L2Q8N4X5 818 aa4.8□□□□□ -1.64
KTN1-220ENST00000555172 GATAD2BQ8WXI9 593 aa4.8□□□□□ -1.64
KTN1-220ENST00000555172 NINJ1Q92982 152 aa4.8□□□□□ -1.64
KTN1-220ENST00000555172 RUNDC1Q96C34 613 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms