RNA–Protein interactions for RNA: ENST00000555022.5

SYNE2-217, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,396 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-217ENST00000555022 SUFUQ9UMX1 484 aa9.97□□□□□ -0.81
SYNE2-217ENST00000555022 KAT6BQ8WYB5 2073 aa9.97□□□□□ -0.81
SYNE2-217ENST00000555022 PPP1R12BO60237 982 aaPredicted RBP9.97□□□□□ -0.81
SYNE2-217ENST00000555022 PLEKHA8P1O95397 391 aa9.97□□□□□ -0.81
SYNE2-217ENST00000555022 PDHBP11177 359 aa9.97□□□□□ -0.81
SYNE2-217ENST00000555022 PTPREP23469 700 aa9.97□□□□□ -0.81
SYNE2-217ENST00000555022 TTF1Q15361 905 aaPredicted RBP9.97□□□□□ -0.81
SYNE2-217ENST00000555022 PIK3AP1Q6ZUJ8 805 aa9.97□□□□□ -0.81
SYNE2-217ENST00000555022 CCDC43Q96MW1 224 aaKnown RBP9.97□□□□□ -0.81
SYNE2-217ENST00000555022 MED4Q9NPJ6 270 aa9.97□□□□□ -0.81
SYNE2-217ENST00000555022 ABCF2Q9UG63 623 aa9.97□□□□□ -0.81
SYNE2-217ENST00000555022 LUC7L2Q9Y383 392 aaKnown RBP9.97□□□□□ -0.81
SYNE2-217ENST00000555022 SMIM23A6NLE4 172 aa9.97□□□□□ -0.81
SYNE2-217ENST00000555022 SNRPA1P09661 255 aaKnown RBP9.97□□□□□ -0.81
SYNE2-217ENST00000555022 MYBL1P10243 752 aa9.97□□□□□ -0.81
SYNE2-217ENST00000555022 RDXP35241 583 aaKnown RBP9.97□□□□□ -0.81
SYNE2-217ENST00000555022 USP5P45974 858 aa9.97□□□□□ -0.81
SYNE2-217ENST00000555022 HLFQ16534 295 aa9.97□□□□□ -0.81
SYNE2-217ENST00000555022 PRPF38AQ8NAV1 312 aaKnown RBP9.97□□□□□ -0.81
SYNE2-217ENST00000555022 TBC1D31Q96DN5 1066 aa9.97□□□□□ -0.81
SYNE2-217ENST00000555022 GOLPH3Q9H4A6 298 aa9.97□□□□□ -0.81
SYNE2-217ENST00000555022 GEMIN8Q9NWZ8 242 aaKnown RBP9.97□□□□□ -0.81
SYNE2-217ENST00000555022 MON2Q7Z3U7 1717 aa9.97□□□□□ -0.81
SYNE2-217ENST00000555022 PPP1R3GB7ZBB8 358 aa9.96□□□□□ -0.81
SYNE2-217ENST00000555022 MMP1P03956 469 aa9.96□□□□□ -0.81
SYNE2-217ENST00000555022 FAM153BP0C7A2 387 aa9.96□□□□□ -0.81
SYNE2-217ENST00000555022 SETQ01105 290 aaPredicted RBP9.96□□□□□ -0.81
SYNE2-217ENST00000555022 WTAPQ15007 396 aa9.96□□□□□ -0.81
SYNE2-217ENST00000555022 FAM153CQ494X1 144 aa9.96□□□□□ -0.81
SYNE2-217ENST00000555022 TMTC1Q8IUR5 882 aa9.96□□□□□ -0.81
SYNE2-217ENST00000555022 HNRNPLLQ8WVV9 542 aaKnown RBP9.96□□□□□ -0.81
SYNE2-217ENST00000555022 SLC52A2Q9HAB3 445 aa9.96□□□□□ -0.81
SYNE2-217ENST00000555022 FAM153AQ9UHL3 310 aa9.96□□□□□ -0.81
SYNE2-217ENST00000555022 NFU1Q9UMS0 254 aa9.96□□□□□ -0.81
SYNE2-217ENST00000555022 NCAPD2Q15021 1401 aa9.96□□□□□ -0.81
SYNE2-217ENST00000555022 TNRQ92752 1358 aa9.96□□□□□ -0.82
SYNE2-217ENST00000555022 TMEM2Q9UHN6 1383 aa9.96□□□□□ -0.82
SYNE2-217ENST00000555022 E7EVH7 732 aa9.96□□□□□ -0.82
SYNE2-217ENST00000555022 HDLBPQ00341 1268 aaKnown RBP9.96□□□□□ -0.82
SYNE2-217ENST00000555022 PTGDRQ13258 359 aa9.96□□□□□ -0.82
SYNE2-217ENST00000555022 NTRK3Q16288 839 aa9.96□□□□□ -0.82
SYNE2-217ENST00000555022 TEX2Q8IWB9 1127 aa9.96□□□□□ -0.82
SYNE2-217ENST00000555022 KLHL7Q8IXQ5 586 aa9.96□□□□□ -0.82
SYNE2-217ENST00000555022 ZNF526Q8TF50 670 aaPredicted RBP9.96□□□□□ -0.82
SYNE2-217ENST00000555022 N4BP2L2Q92802 583 aaPredicted RBP9.96□□□□□ -0.82
SYNE2-217ENST00000555022 BABAM1Q9NWV8 329 aa9.96□□□□□ -0.82
SYNE2-217ENST00000555022 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.96□□□□□ -0.82
SYNE2-217ENST00000555022 CAPN6Q9Y6Q1 641 aa9.96□□□□□ -0.82
SYNE2-217ENST00000555022 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.96□□□□□ -0.82
SYNE2-217ENST00000555022 AMPD2Q01433 879 aa9.95□□□□□ -0.82
SYNE2-217ENST00000555022 HLTFQ14527 1009 aaKnown RBP eCLIP9.95□□□□□ -0.82
SYNE2-217ENST00000555022 AMOTQ4VCS5 1084 aa9.95□□□□□ -0.82
SYNE2-217ENST00000555022 CCDC178Q5BJE1 867 aa9.95□□□□□ -0.82
SYNE2-217ENST00000555022 TTMPQ5BVD1 217 aa9.95□□□□□ -0.82
SYNE2-217ENST00000555022 OPLAHO14841 1288 aa9.95□□□□□ -0.82
SYNE2-217ENST00000555022 NMT2O60551 498 aa9.95□□□□□ -0.82
SYNE2-217ENST00000555022 UPP2O95045 317 aa9.95□□□□□ -0.82
SYNE2-217ENST00000555022 PRCPP42785 496 aa9.95□□□□□ -0.82
SYNE2-217ENST00000555022 PAK1Q13153 545 aa9.95□□□□□ -0.82
SYNE2-217ENST00000555022 CHADLQ6NUI6 762 aa9.95□□□□□ -0.82
SYNE2-217ENST00000555022 SHISA4Q96DD7 197 aa9.95□□□□□ -0.82
SYNE2-217ENST00000555022 RNPC3Q96LT9 517 aaKnown RBP9.95□□□□□ -0.82
SYNE2-217ENST00000555022 STRN4Q9NRL3 753 aa9.95□□□□□ -0.82
SYNE2-217ENST00000555022 MYH8P13535 1937 aa9.95□□□□□ -0.82
SYNE2-217ENST00000555022 ERICH2A1L162 156 aa9.95□□□□□ -0.82
SYNE2-217ENST00000555022 PARP1P09874 1014 aaKnown RBP9.95□□□□□ -0.82
SYNE2-217ENST00000555022 PDE6AP16499 860 aa9.95□□□□□ -0.82
SYNE2-217ENST00000555022 ATP6V1AP38606 617 aa9.95□□□□□ -0.82
SYNE2-217ENST00000555022 MTIF2P46199 727 aaKnown RBP9.95□□□□□ -0.82
SYNE2-217ENST00000555022 NNTQ13423 1086 aa9.95□□□□□ -0.82
SYNE2-217ENST00000555022 NBPF9Q3BBW0 867 aa9.95□□□□□ -0.82
SYNE2-217ENST00000555022 MFSD6Q6ZSS7 791 aa9.95□□□□□ -0.82
SYNE2-217ENST00000555022 EPB41L4AQ9HCS5 686 aaPredicted RBP9.95□□□□□ -0.82
SYNE2-217ENST00000555022 GGT7Q9UJ14 662 aa9.95□□□□□ -0.82
SYNE2-217ENST00000555022 UTYO14607 1347 aa9.95□□□□□ -0.82
SYNE2-217ENST00000555022 NEBLO76041 1014 aa9.94□□□□□ -0.82
SYNE2-217ENST00000555022 FTCDO95954 541 aa9.94□□□□□ -0.82
SYNE2-217ENST00000555022 GUCY2DQ02846 1103 aa9.94□□□□□ -0.82
SYNE2-217ENST00000555022 CCNI2Q6ZMN8 369 aaPredicted RBP9.94□□□□□ -0.82
SYNE2-217ENST00000555022 CCDC155Q8N6L0 562 aa9.94□□□□□ -0.82
SYNE2-217ENST00000555022 UHMK1Q8TAS1 419 aaKnown RBP9.94□□□□□ -0.82
SYNE2-217ENST00000555022 IGDCC4Q8TDY8 1250 aa9.94□□□□□ -0.82
SYNE2-217ENST00000555022 GPKOWQ92917 476 aaPredicted RBP eCLIP9.94□□□□□ -0.82
SYNE2-217ENST00000555022 XDHP47989 1333 aa9.94□□□□□ -0.82
SYNE2-217ENST00000555022 HSF2BPO75031 334 aa9.94□□□□□ -0.82
SYNE2-217ENST00000555022 PEX19P40855 299 aa9.94□□□□□ -0.82
SYNE2-217ENST00000555022 IFIT5Q13325 482 aaKnown RBP9.94□□□□□ -0.82
SYNE2-217ENST00000555022 ODF2Q5BJF6 829 aa9.94□□□□□ -0.82
SYNE2-217ENST00000555022 TRAPPC11Q7Z392 1133 aa9.94□□□□□ -0.82
SYNE2-217ENST00000555022 C2CD5Q86YS7 1000 aa9.94□□□□□ -0.82
SYNE2-217ENST00000555022 NLRP3Q96P20 1036 aa9.94□□□□□ -0.82
SYNE2-217ENST00000555022 TRIM31Q9BZY9 425 aa9.94□□□□□ -0.82
SYNE2-217ENST00000555022 GREM2Q9H772 168 aa9.94□□□□□ -0.82
SYNE2-217ENST00000555022 MMRN2Q9H8L6 949 aa9.94□□□□□ -0.82
SYNE2-217ENST00000555022 BRMS1Q9HCU9 246 aa9.94□□□□□ -0.82
SYNE2-217ENST00000555022 ADAMTS13Q76LX8 1427 aa9.94□□□□□ -0.82
SYNE2-217ENST00000555022 EIF3HO15372 352 aaKnown RBP eCLIP9.94□□□□□ -0.82
SYNE2-217ENST00000555022 PAX7P23759 505 aa9.94□□□□□ -0.82
SYNE2-217ENST00000555022 TMOD1P28289 359 aa9.94□□□□□ -0.82
SYNE2-217ENST00000555022 CARSP49589 748 aaKnown RBP9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms