RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 BCRP11274 1271 aa7.56□□□□□ -1.2
SYNE2-216ENST00000555002 PGBD1Q96JS3 809 aa7.56□□□□□ -1.2
SYNE2-216ENST00000555002 K7ENM7 598 aa7.56□□□□□ -1.2
SYNE2-216ENST00000555002 POLR2DO15514 142 aaKnown RBP7.56□□□□□ -1.2
SYNE2-216ENST00000555002 HABP4Q5JVS0 413 aaKnown RBP7.56□□□□□ -1.2
SYNE2-216ENST00000555002 TYW1BQ6NUM6 668 aa7.56□□□□□ -1.2
SYNE2-216ENST00000555002 RDH13Q8NBN7 331 aa7.56□□□□□ -1.2
SYNE2-216ENST00000555002 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.56□□□□□ -1.2
SYNE2-216ENST00000555002 LMTK3Q96Q04 1460 aa7.56□□□□□ -1.2
SYNE2-216ENST00000555002 PRDM1O75626 825 aa7.56□□□□□ -1.2
SYNE2-216ENST00000555002 RPS6KA1Q15418 735 aa7.56□□□□□ -1.2
SYNE2-216ENST00000555002 CFAP36Q96G28 342 aa7.56□□□□□ -1.2
SYNE2-216ENST00000555002 TRIM4Q9C037 500 aa7.56□□□□□ -1.2
SYNE2-216ENST00000555002 Q9H521 79 aa7.56□□□□□ -1.2
SYNE2-216ENST00000555002 LMNB1P20700 586 aa7.55□□□□□ -1.2
SYNE2-216ENST00000555002 U2AF2P26368 475 aaKnown RBP eCLIP7.55□□□□□ -1.2
SYNE2-216ENST00000555002 TTC38Q5R3I4 469 aa7.55□□□□□ -1.2
SYNE2-216ENST00000555002 TGFBRAP1Q8WUH2 860 aa7.55□□□□□ -1.2
SYNE2-216ENST00000555002 CCPG1Q9ULG6 757 aa7.55□□□□□ -1.2
SYNE2-216ENST00000555002 INPP5FQ9Y2H2 1132 aa7.55□□□□□ -1.2
SYNE2-216ENST00000555002 HLA-DPA1P20036 260 aa7.55□□□□□ -1.2
SYNE2-216ENST00000555002 PPP2R5EQ16537 467 aa7.55□□□□□ -1.2
SYNE2-216ENST00000555002 TRMT10CQ7L0Y3 403 aaKnown RBP7.55□□□□□ -1.2
SYNE2-216ENST00000555002 CFAP61Q8NHU2 1237 aa7.55□□□□□ -1.2
SYNE2-216ENST00000555002 TBRG4Q969Z0 631 aaKnown RBP eCLIP7.55□□□□□ -1.23e-8■■■■■ 70.6
SYNE2-216ENST00000555002 WDR97A6NE52 1622 aa7.55□□□□□ -1.2
SYNE2-216ENST00000555002 ABCB4P21439 1286 aa7.55□□□□□ -1.2
SYNE2-216ENST00000555002 CREB3L3Q68CJ9 461 aa7.55□□□□□ -1.2
SYNE2-216ENST00000555002 NLRX1Q86UT6 975 aa7.55□□□□□ -1.2
SYNE2-216ENST00000555002 FAM186BQ8IYM0 893 aa7.55□□□□□ -1.2
SYNE2-216ENST00000555002 MICAL1Q8TDZ2 1067 aa7.55□□□□□ -1.2
SYNE2-216ENST00000555002 ATP6V0A1Q93050 837 aa7.55□□□□□ -1.2
SYNE2-216ENST00000555002 EEF1B2P24534 225 aaKnown RBP7.55□□□□□ -1.2
SYNE2-216ENST00000555002 CTDSPL2Q05D32 466 aa7.55□□□□□ -1.2
SYNE2-216ENST00000555002 PAK1Q13153 545 aa7.55□□□□□ -1.2
SYNE2-216ENST00000555002 SNX25Q9H3E2 840 aa7.55□□□□□ -1.2
SYNE2-216ENST00000555002 PRDM5Q9NQX1 630 aaPredicted RBP7.55□□□□□ -1.2
SYNE2-216ENST00000555002 THAP12O43422 761 aa7.55□□□□□ -1.2
SYNE2-216ENST00000555002 ALAS1P13196 640 aa7.55□□□□□ -1.2
SYNE2-216ENST00000555002 GARSP41250 739 aaKnown RBP7.55□□□□□ -1.2
SYNE2-216ENST00000555002 LIG4P49917 911 aa7.55□□□□□ -1.2
SYNE2-216ENST00000555002 YWHAGP61981 247 aaKnown RBP eCLIP7.55□□□□□ -1.2
SYNE2-216ENST00000555002 RNF168Q8IYW5 571 aaPredicted RBP7.55□□□□□ -1.2
SYNE2-216ENST00000555002 ATAD2BQ9ULI0 1458 aa7.55□□□□□ -1.2
SYNE2-216ENST00000555002 A6NJR5 290 aa7.55□□□□□ -1.2
SYNE2-216ENST00000555002 PPIP5K2O43314 1243 aa7.55□□□□□ -1.2
SYNE2-216ENST00000555002 SRGAP2BP0DMP2 458 aa7.55□□□□□ -1.2
SYNE2-216ENST00000555002 FRMPD2Q68DX3 1309 aaPredicted RBP7.55□□□□□ -1.2
SYNE2-216ENST00000555002 RRAGAQ7L523 313 aa7.55□□□□□ -1.2
SYNE2-216ENST00000555002 MAPKAPK5Q8IW41 473 aa7.55□□□□□ -1.2
SYNE2-216ENST00000555002 HAUS1Q96CS2 278 aa7.55□□□□□ -1.2
SYNE2-216ENST00000555002 BICC1Q9H694 974 aaKnown RBP7.55□□□□□ -1.2
SYNE2-216ENST00000555002 ABT1Q9ULW3 272 aaKnown RBP7.55□□□□□ -1.2
SYNE2-216ENST00000555002 POLIQ9UNA4 740 aa7.55□□□□□ -1.2
SYNE2-216ENST00000555002 EVI5O60447 810 aa7.55□□□□□ -1.2
SYNE2-216ENST00000555002 PMLP29590 882 aa7.55□□□□□ -1.2
SYNE2-216ENST00000555002 SLC9C1Q4G0N8 1177 aa7.55□□□□□ -1.2
SYNE2-216ENST00000555002 V9GY48 417 aaPredicted RBP7.55□□□□□ -1.2
SYNE2-216ENST00000555002 H7C1D1 291 aa7.55□□□□□ -1.2
SYNE2-216ENST00000555002 PTPREP23469 700 aa7.55□□□□□ -1.2
SYNE2-216ENST00000555002 RFX6Q8HWS3 928 aa7.55□□□□□ -1.2
SYNE2-216ENST00000555002 ADPGKQ9BRR6 497 aa7.55□□□□□ -1.2
SYNE2-216ENST00000555002 BLZF1Q9H2G9 400 aa7.55□□□□□ -1.2
SYNE2-216ENST00000555002 C1orf112Q9NSG2 853 aa7.55□□□□□ -1.2
SYNE2-216ENST00000555002 AKT3Q9Y243 479 aa7.55□□□□□ -1.2
SYNE2-216ENST00000555002 MAP3K7O43318 606 aa7.54□□□□□ -1.2
SYNE2-216ENST00000555002 MKRN3Q13064 507 aaKnown RBP7.54□□□□□ -1.2
SYNE2-216ENST00000555002 NCAPG2Q86XI2 1143 aa7.54□□□□□ -1.2
SYNE2-216ENST00000555002 IFT122Q9HBG6 1241 aa7.54□□□□□ -1.2
SYNE2-216ENST00000555002 SLC38A10Q9HBR0 1119 aa7.54□□□□□ -1.2
SYNE2-216ENST00000555002 KIF14Q15058 1648 aa7.54□□□□□ -1.2
SYNE2-216ENST00000555002 DNAJC8O75937 253 aaPredicted RBP7.54□□□□□ -1.2
SYNE2-216ENST00000555002 FBLN1P23142 703 aa7.54□□□□□ -1.2
SYNE2-216ENST00000555002 LZICQ8WZA0 190 aa7.54□□□□□ -1.2
SYNE2-216ENST00000555002 ZFYVE19Q96K21 471 aa7.54□□□□□ -1.2
SYNE2-216ENST00000555002 PPP1R16BQ96T49 567 aa7.54□□□□□ -1.2
SYNE2-216ENST00000555002 ESYT1Q9BSJ8 1104 aa7.54□□□□□ -1.2
SYNE2-216ENST00000555002 PARP2Q9UGN5 583 aa7.54□□□□□ -1.2
SYNE2-216ENST00000555002 MYO9BQ13459 2157 aa7.54□□□□□ -1.2
SYNE2-216ENST00000555002 DMP1Q13316 513 aaPredicted RBP7.54□□□□□ -1.2
SYNE2-216ENST00000555002 PHLDB3Q6NSJ2 640 aa7.54□□□□□ -1.2
SYNE2-216ENST00000555002 DDX17Q92841 729 aaKnown RBP7.54□□□□□ -1.2
SYNE2-216ENST00000555002 TLR3O15455 904 aaKnown RBP7.54□□□□□ -1.2
SYNE2-216ENST00000555002 TRPA1O75762 1119 aa7.54□□□□□ -1.2
SYNE2-216ENST00000555002 ZRANB2O95218 330 aaKnown RBP eCLIP7.54□□□□□ -1.2
SYNE2-216ENST00000555002 ACTN1P12814 892 aa7.54□□□□□ -1.2
SYNE2-216ENST00000555002 TRIM14Q14142 442 aa7.54□□□□□ -1.2
SYNE2-216ENST00000555002 GPBP1Q86WP2 473 aa7.54□□□□□ -1.2
SYNE2-216ENST00000555002 POTEDQ86YR6 584 aa7.54□□□□□ -1.2
SYNE2-216ENST00000555002 GTPBP10A4D1E9 387 aaKnown RBP7.54□□□□□ -1.2
SYNE2-216ENST00000555002 NUMA1Q14980 2115 aa7.54□□□□□ -1.2
SYNE2-216ENST00000555002 PPWD1Q96BP3 646 aaKnown RBP7.54□□□□□ -1.2
SYNE2-216ENST00000555002 IFIH1Q9BYX4 1025 aaKnown RBP7.54□□□□□ -1.2
SYNE2-216ENST00000555002 RASSF4Q9H2L5 321 aa7.54□□□□□ -1.2
SYNE2-216ENST00000555002 DENND2AQ9ULE3 1009 aa7.54□□□□□ -1.2
SYNE2-216ENST00000555002 G3BP2Q9UN86 482 aaKnown RBP7.54□□□□□ -1.2
SYNE2-216ENST00000555002 STK24Q9Y6E0 443 aa7.54□□□□□ -1.2
SYNE2-216ENST00000555002 CASKIN1Q8WXD9 1431 aa7.54□□□□□ -1.2
SYNE2-216ENST00000555002 ESRRBO95718 433 aa7.54□□□□□ -1.2
SYNE2-216ENST00000555002 YWHAHQ04917 246 aaPredicted RBP7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms