RNA–Protein interactions for RNA: ENST00000554947.5

SDR39U1-209, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 1,203 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-209ENST00000554947 FCGRTP55899 365 aa28.49■■■□□ 2.15
SDR39U1-209ENST00000554947 ERVK-9P63128 1117 aa28.49■■■□□ 2.15
SDR39U1-209ENST00000554947 ERVK-24P63145 666 aa28.49■■■□□ 2.15
SDR39U1-209ENST00000554947 POTEEQ6S8J3 1075 aa28.49■■■□□ 2.15
SDR39U1-209ENST00000554947 STOX1Q6ZVD7 989 aa28.49■■■□□ 2.15
SDR39U1-209ENST00000554947 UBAC1Q9BSL1 405 aa28.49■■■□□ 2.15
SDR39U1-209ENST00000554947 FEM1BQ9UK73 627 aa28.49■■■□□ 2.15
SDR39U1-209ENST00000554947 PPP1R9AQ9ULJ8 1098 aa28.49■■■□□ 2.15
SDR39U1-209ENST00000554947 TRIM17Q9Y577 477 aa28.49■■■□□ 2.15
SDR39U1-209ENST00000554947 TAF6LQ9Y6J9 622 aa28.49■■■□□ 2.15
SDR39U1-209ENST00000554947 PLA2G6O60733 806 aa28.48■■■□□ 2.15
SDR39U1-209ENST00000554947 BMP3P12645 472 aa28.48■■■□□ 2.15
SDR39U1-209ENST00000554947 PRMT2P55345 433 aa28.48■■■□□ 2.15
SDR39U1-209ENST00000554947 CAP1Q01518 475 aa28.48■■■□□ 2.15
SDR39U1-209ENST00000554947 TSGA10IPQ3SY00 556 aa28.48■■■□□ 2.15
SDR39U1-209ENST00000554947 DCAF4Q8WV16 495 aa28.48■■■□□ 2.15
SDR39U1-209ENST00000554947 MTA3Q9BTC8 594 aa28.48■■■□□ 2.15
SDR39U1-209ENST00000554947 CNMDO75829 334 aa28.47■■■□□ 2.15
SDR39U1-209ENST00000554947 HOXD10P28358 340 aa28.47■■■□□ 2.15
SDR39U1-209ENST00000554947 SLC1A4P43007 532 aa28.47■■■□□ 2.15
SDR39U1-209ENST00000554947 ENAHQ8N8S7 591 aaPredicted RBP28.47■■■□□ 2.15
SDR39U1-209ENST00000554947 TRIM47Q96LD4 638 aa28.47■■■□□ 2.15
SDR39U1-209ENST00000554947 NUP88Q99567 741 aaPredicted RBP28.47■■■□□ 2.15
SDR39U1-209ENST00000554947 SLF1Q9BQI6 1058 aa28.47■■■□□ 2.15
SDR39U1-209ENST00000554947 ZKSCAN3Q9BRR0 538 aa28.47■■■□□ 2.15
SDR39U1-209ENST00000554947 ARHGAP39Q9C0H5 1083 aa28.47■■■□□ 2.15
SDR39U1-209ENST00000554947 TNKSO95271 1327 aa28.46■■■□□ 2.15
SDR39U1-209ENST00000554947 FMNL1O95466 1100 aaPredicted RBP28.46■■■□□ 2.15
SDR39U1-209ENST00000554947 CTGFP29279 349 aa28.46■■■□□ 2.15
SDR39U1-209ENST00000554947 CCNA1P78396 465 aa28.46■■■□□ 2.15
SDR39U1-209ENST00000554947 CYB5R4Q7L1T6 521 aa28.46■■■□□ 2.15
SDR39U1-209ENST00000554947 MB21D2Q8IYB1 491 aaPredicted RBP28.46■■■□□ 2.15
SDR39U1-209ENST00000554947 PRPF38AQ8NAV1 312 aaKnown RBP28.46■■■□□ 2.15
SDR39U1-209ENST00000554947 PAGR1Q9BTK6 254 aa28.46■■■□□ 2.15
SDR39U1-209ENST00000554947 MCOLN1Q9GZU1 580 aa28.46■■■□□ 2.15
SDR39U1-209ENST00000554947 MCCP23508 829 aa28.45■■■□□ 2.14
SDR39U1-209ENST00000554947 FBXO46Q6PJ61 603 aaPredicted RBP28.45■■■□□ 2.14
SDR39U1-209ENST00000554947 FAM160B2Q86V87 743 aa28.45■■■□□ 2.14
SDR39U1-209ENST00000554947 TNS4Q8IZW8 715 aa28.45■■■□□ 2.14
SDR39U1-209ENST00000554947 KCNB2Q92953 911 aa28.45■■■□□ 2.14
SDR39U1-209ENST00000554947 ATG4CQ96DT6 458 aa28.45■■■□□ 2.14
SDR39U1-209ENST00000554947 FBXO28Q9NVF7 368 aa28.45■■■□□ 2.14
SDR39U1-209ENST00000554947 BTBD7Q9P203 1132 aa28.45■■■□□ 2.14
SDR39U1-209ENST00000554947 EIF5BO60841 1220 aaKnown RBP28.44■■■□□ 2.14
SDR39U1-209ENST00000554947 FDX1P10109 184 aa28.44■■■□□ 2.14
SDR39U1-209ENST00000554947 ZKSCAN1P17029 563 aaPredicted RBP28.44■■■□□ 2.14
SDR39U1-209ENST00000554947 MAPK4P31152 587 aa28.44■■■□□ 2.14
SDR39U1-209ENST00000554947 SART3Q15020 963 aaKnown RBP28.44■■■□□ 2.14
SDR39U1-209ENST00000554947 SEC23AQ15436 765 aa28.44■■■□□ 2.14
SDR39U1-209ENST00000554947 Q3C1V9 767 aa28.44■■■□□ 2.14
SDR39U1-209ENST00000554947 CHURC1Q8WUH1 139 aa28.44■■■□□ 2.14
SDR39U1-209ENST00000554947 VWA5AO00534 786 aa28.43■■■□□ 2.14
SDR39U1-209ENST00000554947 SNHG28P0DPA3 235 aa28.43■■■□□ 2.14
SDR39U1-209ENST00000554947 STAT2P52630 851 aa28.43■■■□□ 2.14
SDR39U1-209ENST00000554947 KRT32Q14532 448 aa28.43■■■□□ 2.14
SDR39U1-209ENST00000554947 KAT14Q9H8E8 782 aa28.43■■■□□ 2.14
SDR39U1-209ENST00000554947 SRRDQ9UH36 339 aa28.43■■■□□ 2.14
SDR39U1-209ENST00000554947 PTPN22Q9Y2R2 807 aa28.43■■■□□ 2.14
SDR39U1-209ENST00000554947 ERICH2A1L162 156 aa28.42■■■□□ 2.14
SDR39U1-209ENST00000554947 TNPO2O14787 897 aaKnown RBP28.42■■■□□ 2.14
SDR39U1-209ENST00000554947 HSPA4P34932 840 aa28.42■■■□□ 2.14
SDR39U1-209ENST00000554947 IFIT1BQ5T764 474 aaKnown RBP28.42■■■□□ 2.14
SDR39U1-209ENST00000554947 PNMA1Q8ND90 353 aa28.42■■■□□ 2.14
SDR39U1-209ENST00000554947 COA7Q96BR5 231 aa28.42■■■□□ 2.14
SDR39U1-209ENST00000554947 TMEM232C9JQI7 657 aa28.41■■■□□ 2.14
SDR39U1-209ENST00000554947 PDHBP11177 359 aa28.41■■■□□ 2.14
SDR39U1-209ENST00000554947 MCM5P33992 734 aa28.41■■■□□ 2.14
SDR39U1-209ENST00000554947 SPATC1LQ9H0A9 340 aa28.41■■■□□ 2.14
SDR39U1-209ENST00000554947 IFIT3O14879 490 aaKnown RBP28.4■■■□□ 2.14
SDR39U1-209ENST00000554947 ANTXR2P58335 489 aa28.4■■■□□ 2.14
SDR39U1-209ENST00000554947 BTNL9Q6UXG8 535 aa28.4■■■□□ 2.14
SDR39U1-209ENST00000554947 SHCBP1Q8NEM2 672 aa28.4■■■□□ 2.14
SDR39U1-209ENST00000554947 REPS2Q8NFH8 660 aa28.4■■■□□ 2.14
SDR39U1-209ENST00000554947 ATP2A1O14983 1001 aa28.39■■■□□ 2.14
SDR39U1-209ENST00000554947 PEX10O60683 326 aa28.39■■■□□ 2.14
SDR39U1-209ENST00000554947 GPATCH4Q5T3I0 446 aaKnown RBP28.39■■■□□ 2.14
SDR39U1-209ENST00000554947 KCTD1Q719H9 257 aa28.39■■■□□ 2.14
SDR39U1-209ENST00000554947 CCAR1Q8IX12 1150 aaKnown RBP28.39■■■□□ 2.14
SDR39U1-209ENST00000554947 TMEM87BQ96K49 555 aa28.39■■■□□ 2.14
SDR39U1-209ENST00000554947 PORCNQ9H237 461 aa28.39■■■□□ 2.14
SDR39U1-209ENST00000554947 WDR19Q8NEZ3 1342 aa28.39■■■□□ 2.13
SDR39U1-209ENST00000554947 PLXNB2O15031 1838 aa28.39■■■□□ 2.13
SDR39U1-209ENST00000554947 ZBED4O75132 1171 aa28.38■■■□□ 2.13
SDR39U1-209ENST00000554947 COPB2P35606 906 aa28.38■■■□□ 2.13
SDR39U1-209ENST00000554947 ZNF543Q08ER8 600 aa28.38■■■□□ 2.13
SDR39U1-209ENST00000554947 TMEM132BQ14DG7 1078 aa28.38■■■□□ 2.13
SDR39U1-209ENST00000554947 WTAPQ15007 396 aa28.38■■■□□ 2.13
SDR39U1-209ENST00000554947 CCDC96Q2M329 555 aa28.38■■■□□ 2.13
SDR39U1-209ENST00000554947 SAMD1Q6SPF0 538 aaPredicted RBP28.38■■■□□ 2.13
SDR39U1-209ENST00000554947 RASEFQ8IZ41 740 aa28.38■■■□□ 2.13
SDR39U1-209ENST00000554947 IGDCC4Q8TDY8 1250 aa28.38■■■□□ 2.13
SDR39U1-209ENST00000554947 KIFC2Q96AC6 838 aa28.38■■■□□ 2.13
SDR39U1-209ENST00000554947 NEK1Q96PY6 1258 aa28.38■■■□□ 2.13
SDR39U1-209ENST00000554947 MOV10L1Q9BXT6 1211 aaKnown RBP28.38■■■□□ 2.13
SDR39U1-209ENST00000554947 USP26Q9BXU7 913 aa28.38■■■□□ 2.13
SDR39U1-209ENST00000554947 SLC38A10Q9HBR0 1119 aa28.38■■■□□ 2.13
SDR39U1-209ENST00000554947 SLC25A27O95847 323 aa28.37■■■□□ 2.13
SDR39U1-209ENST00000554947 OAZ1P54368 228 aa28.37■■■□□ 2.13
SDR39U1-209ENST00000554947 TMTC2Q8N394 836 aa28.37■■■□□ 2.13
SDR39U1-209ENST00000554947 ZNF214Q9UL59 606 aaPredicted RBP28.37■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms