RNA–Protein interactions for RNA: ENST00000554901.1

SPTLC2-203, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 1 (best)

Gene SPTLC2, Length 1,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-203ENST00000554901 USP17L15C9J2P7 530 aa19.2■□□□□ 0.66
SPTLC2-203ENST00000554901 USP17L13C9JLJ4 530 aa19.2■□□□□ 0.66
SPTLC2-203ENST00000554901 USP17L11C9JVI0 530 aa19.2■□□□□ 0.66
SPTLC2-203ENST00000554901 USP17L18D6R9N7 530 aa19.2■□□□□ 0.66
SPTLC2-203ENST00000554901 USP17L22D6RA61 530 aa19.2■□□□□ 0.66
SPTLC2-203ENST00000554901 USP17L17D6RBQ6 530 aa19.2■□□□□ 0.66
SPTLC2-203ENST00000554901 USP17L19D6RCP7 530 aa19.2■□□□□ 0.66
SPTLC2-203ENST00000554901 USP17L20D6RJB6 530 aa19.2■□□□□ 0.66
SPTLC2-203ENST00000554901 ZBTB43O43298 467 aa19.2■□□□□ 0.66
SPTLC2-203ENST00000554901 RAD21O60216 631 aa19.2■□□□□ 0.66
SPTLC2-203ENST00000554901 PLA2G6O60733 806 aa19.2■□□□□ 0.66
SPTLC2-203ENST00000554901 KIF5BP33176 963 aa19.2■□□□□ 0.66
SPTLC2-203ENST00000554901 MCM2P49736 904 aa19.2■□□□□ 0.66
SPTLC2-203ENST00000554901 ZNF543Q08ER8 600 aa19.2■□□□□ 0.66
SPTLC2-203ENST00000554901 USP17L24Q0WX57 530 aa19.2■□□□□ 0.66
SPTLC2-203ENST00000554901 SPICE1Q8N0Z3 855 aa19.2■□□□□ 0.66
SPTLC2-203ENST00000554901 BRPF3Q9ULD4 1205 aa19.2■□□□□ 0.66
SPTLC2-203ENST00000554901 PARP1P09874 1014 aaKnown RBP19.19■□□□□ 0.66
SPTLC2-203ENST00000554901 APOBRQ0VD83 1088 aa19.19■□□□□ 0.66
SPTLC2-203ENST00000554901 GRM1Q13255 1194 aa19.19■□□□□ 0.66
SPTLC2-203ENST00000554901 NID2Q14112 1375 aa19.19■□□□□ 0.66
SPTLC2-203ENST00000554901 GRM4Q14833 912 aa19.19■□□□□ 0.66
SPTLC2-203ENST00000554901 GPAT2Q6NUI2 795 aa19.19■□□□□ 0.66
SPTLC2-203ENST00000554901 CTCFLQ8NI51 663 aaPredicted RBP19.19■□□□□ 0.66
SPTLC2-203ENST00000554901 RPAP3Q9H6T3 665 aaPredicted RBP19.19■□□□□ 0.66
SPTLC2-203ENST00000554901 PNMA3Q9UL41 463 aa19.19■□□□□ 0.66
SPTLC2-203ENST00000554901 MYPNQ86TC9 1320 aa19.18■□□□□ 0.66
SPTLC2-203ENST00000554901 BTBD19C9JJ37 291 aa19.18■□□□□ 0.66
SPTLC2-203ENST00000554901 GNAQP50148 359 aa19.18■□□□□ 0.66
SPTLC2-203ENST00000554901 FAM83BQ5T0W9 1011 aa19.18■□□□□ 0.66
SPTLC2-203ENST00000554901 CATSPERGQ6ZRH7 1159 aa19.18■□□□□ 0.66
SPTLC2-203ENST00000554901 CHURC1Q8WUH1 139 aa19.18■□□□□ 0.66
SPTLC2-203ENST00000554901 FEM1BQ9UK73 627 aa19.18■□□□□ 0.66
SPTLC2-203ENST00000554901 THSD7BQ9C0I4 1608 aa19.17■□□□□ 0.66
SPTLC2-203ENST00000554901 CCDC196A0A1B0GTZ2 297 aa19.17■□□□□ 0.66
SPTLC2-203ENST00000554901 ALDH1A1P00352 501 aa19.17■□□□□ 0.66
SPTLC2-203ENST00000554901 DGKZQ13574 1117 aa19.17■□□□□ 0.66
SPTLC2-203ENST00000554901 CCDC96Q2M329 555 aa19.17■□□□□ 0.66
SPTLC2-203ENST00000554901 TREML2Q5T2D2 321 aa19.17■□□□□ 0.66
SPTLC2-203ENST00000554901 BTNL9Q6UXG8 535 aa19.17■□□□□ 0.66
SPTLC2-203ENST00000554901 FAM160B2Q86V87 743 aa19.17■□□□□ 0.66
SPTLC2-203ENST00000554901 MICU3Q86XE3 530 aa19.17■□□□□ 0.66
SPTLC2-203ENST00000554901 IFNL1Q8IU54 200 aa19.17■□□□□ 0.66
SPTLC2-203ENST00000554901 FANCBQ8NB91 859 aa19.17■□□□□ 0.66
SPTLC2-203ENST00000554901 NUP133Q8WUM0 1156 aa19.17■□□□□ 0.66
SPTLC2-203ENST00000554901 PTPN18Q99952 460 aa19.17■□□□□ 0.66
SPTLC2-203ENST00000554901 TANGO6Q9C0B7 1094 aa19.17■□□□□ 0.66
SPTLC2-203ENST00000554901 RBM28Q9NW13 759 aaKnown RBP19.17■□□□□ 0.66
SPTLC2-203ENST00000554901 LIMCH1Q9UPQ0 1083 aa19.17■□□□□ 0.66
SPTLC2-203ENST00000554901 PALM3A6NDB9 673 aaPredicted RBP19.16■□□□□ 0.66
SPTLC2-203ENST00000554901 GOLGA8BA8MQT2 603 aa19.16■□□□□ 0.66
SPTLC2-203ENST00000554901 AOC2O75106 756 aa19.16■□□□□ 0.66
SPTLC2-203ENST00000554901 OSBPP22059 807 aa19.16■□□□□ 0.66
SPTLC2-203ENST00000554901 SMARCA1P28370 1054 aa19.16■□□□□ 0.66
SPTLC2-203ENST00000554901 PDIA3P30101 505 aaKnown RBP19.16■□□□□ 0.66
SPTLC2-203ENST00000554901 STAT2P52630 851 aa19.16■□□□□ 0.66
SPTLC2-203ENST00000554901 CHMP4CQ96CF2 233 aa19.16■□□□□ 0.66
SPTLC2-203ENST00000554901 ZSCAN31Q96LW9 406 aaPredicted RBP19.16■□□□□ 0.66
SPTLC2-203ENST00000554901 LZTS2Q9BRK4 669 aa19.16■□□□□ 0.66
SPTLC2-203ENST00000554901 HOXC10Q9NYD6 342 aa19.16■□□□□ 0.66
SPTLC2-203ENST00000554901 MAD2L2Q9UI95 211 aa19.16■□□□□ 0.66
SPTLC2-203ENST00000554901 MTMR7Q9Y216 660 aa19.16■□□□□ 0.66
SPTLC2-203ENST00000554901 PDHXO00330 501 aa19.15■□□□□ 0.66
SPTLC2-203ENST00000554901 FDX1P10109 184 aa19.15■□□□□ 0.66
SPTLC2-203ENST00000554901 METAP2P50579 478 aaKnown RBP eCLIP19.15■□□□□ 0.66
SPTLC2-203ENST00000554901 IRX3P78415 501 aaPredicted RBP19.15■□□□□ 0.66
SPTLC2-203ENST00000554901 COG2Q14746 738 aa19.15■□□□□ 0.66
SPTLC2-203ENST00000554901 FAM43AQ8N2R8 423 aa19.15■□□□□ 0.66
SPTLC2-203ENST00000554901 PRPF38AQ8NAV1 312 aaKnown RBP19.15■□□□□ 0.66
SPTLC2-203ENST00000554901 GTF3C2Q8WUA4 911 aaPredicted RBP19.15■□□□□ 0.66
SPTLC2-203ENST00000554901 ZIC5Q96T25 663 aa19.15■□□□□ 0.66
SPTLC2-203ENST00000554901 NUP88Q99567 741 aaPredicted RBP19.15■□□□□ 0.66
SPTLC2-203ENST00000554901 MYL10Q9BUA6 226 aa19.15■□□□□ 0.66
SPTLC2-203ENST00000554901 TPCN1Q9ULQ1 816 aa19.15■□□□□ 0.66
SPTLC2-203ENST00000554901 HPS5Q9UPZ3 1129 aa19.15■□□□□ 0.66
SPTLC2-203ENST00000554901 GOLGA8AA7E2F4 631 aa19.15■□□□□ 0.66
SPTLC2-203ENST00000554901 TMEM232C9JQI7 657 aa19.15■□□□□ 0.66
SPTLC2-203ENST00000554901 IGF2BP3O00425 579 aaKnown RBP eCLIP19.15■□□□□ 0.66
SPTLC2-203ENST00000554901 RTN1Q16799 776 aa19.15■□□□□ 0.66
SPTLC2-203ENST00000554901 LBX2Q6XYB7 198 aa19.15■□□□□ 0.66
SPTLC2-203ENST00000554901 KCTD1Q719H9 257 aa19.15■□□□□ 0.66
SPTLC2-203ENST00000554901 PARK7Q99497 189 aaKnown RBP19.15■□□□□ 0.66
SPTLC2-203ENST00000554901 SLF1Q9BQI6 1058 aa19.15■□□□□ 0.66
SPTLC2-203ENST00000554901 ASCC2Q9H1I8 757 aaPredicted RBP19.15■□□□□ 0.66
SPTLC2-203ENST00000554901 SH2B1Q9NRF2 756 aaPredicted RBP19.15■□□□□ 0.66
SPTLC2-203ENST00000554901 NAP1L2Q9ULW6 460 aaPredicted RBP19.15■□□□□ 0.66
SPTLC2-203ENST00000554901 KLRF2D3W0D1 207 aa19.14■□□□□ 0.65
SPTLC2-203ENST00000554901 DHX16O60231 1041 aaKnown RBP19.14■□□□□ 0.65
SPTLC2-203ENST00000554901 PFKFB2O60825 505 aa19.14■□□□□ 0.65
SPTLC2-203ENST00000554901 FLOT1O75955 427 aa19.14■□□□□ 0.65
SPTLC2-203ENST00000554901 SLKQ9H2G2 1235 aaPredicted RBP19.14■□□□□ 0.65
SPTLC2-203ENST00000554901 PPP1R9AQ9ULJ8 1098 aa19.14■□□□□ 0.65
SPTLC2-203ENST00000554901 ISY1Q9ULR0 285 aaKnown RBP19.14■□□□□ 0.65
SPTLC2-203ENST00000554901 FRMPD2Q68DX3 1309 aaPredicted RBP19.13■□□□□ 0.65
SPTLC2-203ENST00000554901 IKQ13123 557 aaPredicted RBP19.13■□□□□ 0.65
SPTLC2-203ENST00000554901 RASGRP2Q7LDG7 609 aa19.13■□□□□ 0.65
SPTLC2-203ENST00000554901 DNAJC5GQ8N7S2 189 aa19.13■□□□□ 0.65
SPTLC2-203ENST00000554901 SNX21Q969T3 373 aa19.13■□□□□ 0.65
SPTLC2-203ENST00000554901 GPCPD1Q9NPB8 672 aa19.13■□□□□ 0.65
SPTLC2-203ENST00000554901 ADAMTS5Q9UNA0 930 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms