RNA–Protein interactions for RNA: ENST00000554808.1

LINC01397-201, Transcript of long intergenic non-protein coding RNA 1397, humanhuman

TSL 4 BASIC

Gene LINC01397, Length 579 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01397-201ENST00000554808 NFXL1Q6ZNB6 911 aa9.42□□□□□ -0.9
LINC01397-201ENST00000554808 GADL1Q6ZQY3 521 aa9.42□□□□□ -0.9
LINC01397-201ENST00000554808 FAM160B2Q86V87 743 aa9.42□□□□□ -0.9
LINC01397-201ENST00000554808 ACER1Q8TDN7 264 aa9.42□□□□□ -0.9
LINC01397-201ENST00000554808 CHURC1Q8WUH1 139 aa9.42□□□□□ -0.9
LINC01397-201ENST00000554808 CNKSR2Q8WXI2 1034 aa9.42□□□□□ -0.9
LINC01397-201ENST00000554808 PARK7Q99497 189 aaKnown RBP9.42□□□□□ -0.9
LINC01397-201ENST00000554808 ZKSCAN3Q9BRR0 538 aa9.42□□□□□ -0.9
LINC01397-201ENST00000554808 LY9Q9HBG7 655 aa9.42□□□□□ -0.9
LINC01397-201ENST00000554808 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.42□□□□□ -0.9
LINC01397-201ENST00000554808 SLC12A7Q9Y666 1083 aa9.42□□□□□ -0.9
LINC01397-201ENST00000554808 NID2Q14112 1375 aa9.41□□□□□ -0.9
LINC01397-201ENST00000554808 CCDC196A0A1B0GTZ2 297 aa9.41□□□□□ -0.9
LINC01397-201ENST00000554808 A0A1W2PRG0 241 aa9.41□□□□□ -0.9
LINC01397-201ENST00000554808 USP17L15C9J2P7 530 aa9.41□□□□□ -0.9
LINC01397-201ENST00000554808 USP17L13C9JLJ4 530 aa9.41□□□□□ -0.9
LINC01397-201ENST00000554808 USP17L11C9JVI0 530 aa9.41□□□□□ -0.9
LINC01397-201ENST00000554808 USP17L18D6R9N7 530 aa9.41□□□□□ -0.9
LINC01397-201ENST00000554808 USP17L22D6RA61 530 aa9.41□□□□□ -0.9
LINC01397-201ENST00000554808 USP17L17D6RBQ6 530 aa9.41□□□□□ -0.9
LINC01397-201ENST00000554808 USP17L19D6RCP7 530 aa9.41□□□□□ -0.9
LINC01397-201ENST00000554808 USP17L20D6RJB6 530 aa9.41□□□□□ -0.9
LINC01397-201ENST00000554808 SNHG28P0DPA3 235 aa9.41□□□□□ -0.9
LINC01397-201ENST00000554808 PDHBP11177 359 aa9.41□□□□□ -0.9
LINC01397-201ENST00000554808 BMP3P12645 472 aa9.41□□□□□ -0.9
LINC01397-201ENST00000554808 SLC1A4P43007 532 aa9.41□□□□□ -0.9
LINC01397-201ENST00000554808 MCM2P49736 904 aa9.41□□□□□ -0.9
LINC01397-201ENST00000554808 GNAQP50148 359 aa9.41□□□□□ -0.9
LINC01397-201ENST00000554808 STAT2P52630 851 aa9.41□□□□□ -0.9
LINC01397-201ENST00000554808 EVCP57679 992 aa9.41□□□□□ -0.9
LINC01397-201ENST00000554808 IRX3P78415 501 aaPredicted RBP9.41□□□□□ -0.9
LINC01397-201ENST00000554808 KIF23Q02241 960 aaPredicted RBP9.41□□□□□ -0.9
LINC01397-201ENST00000554808 USP17L24Q0WX57 530 aa9.41□□□□□ -0.9
LINC01397-201ENST00000554808 GRM1Q13255 1194 aa9.41□□□□□ -0.9
LINC01397-201ENST00000554808 ZYXQ15942 572 aaKnown RBP9.41□□□□□ -0.9
LINC01397-201ENST00000554808 SLFN13Q68D06 897 aa9.41□□□□□ -0.9
LINC01397-201ENST00000554808 APOA5Q6Q788 366 aa9.41□□□□□ -0.9
LINC01397-201ENST00000554808 Q6ZUG5 572 aa9.41□□□□□ -0.9
LINC01397-201ENST00000554808 IFNL1Q8IU54 200 aa9.41□□□□□ -0.9
LINC01397-201ENST00000554808 CLEC10AQ8IUN9 316 aa9.41□□□□□ -0.9
LINC01397-201ENST00000554808 SIAH1Q8IUQ4 282 aa9.41□□□□□ -0.9
LINC01397-201ENST00000554808 ZNF654Q8IZM8 581 aa9.41□□□□□ -0.9
LINC01397-201ENST00000554808 MB21D1Q8N884 522 aa9.41□□□□□ -0.9
LINC01397-201ENST00000554808 CTCFLQ8NI51 663 aaPredicted RBP9.41□□□□□ -0.9
LINC01397-201ENST00000554808 BEGAINQ9BUH8 593 aa9.41□□□□□ -0.9
LINC01397-201ENST00000554808 CFHR5Q9BXR6 569 aa9.41□□□□□ -0.9
LINC01397-201ENST00000554808 EMILIN3Q9NT22 766 aa9.41□□□□□ -0.9
LINC01397-201ENST00000554808 PDRG1Q9NUG6 133 aa9.41□□□□□ -0.9
LINC01397-201ENST00000554808 RBM28Q9NW13 759 aaKnown RBP9.41□□□□□ -0.9
LINC01397-201ENST00000554808 SAGE1Q9NXZ1 904 aa9.41□□□□□ -0.9
LINC01397-201ENST00000554808 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.41□□□□□ -0.9
LINC01397-201ENST00000554808 FEM1BQ9UK73 627 aa9.41□□□□□ -0.9
LINC01397-201ENST00000554808 PNMA2Q9UL42 364 aa9.41□□□□□ -0.9
LINC01397-201ENST00000554808 RAD21O60216 631 aa9.4□□□□□ -0.9
LINC01397-201ENST00000554808 NDUFB10O96000 172 aa9.4□□□□□ -0.9
LINC01397-201ENST00000554808 PARP1P09874 1014 aaKnown RBP9.4□□□□□ -0.9
LINC01397-201ENST00000554808 SMARCA1P28370 1054 aa9.4□□□□□ -0.9
LINC01397-201ENST00000554808 GCLCP48506 637 aaPredicted RBP9.4□□□□□ -0.9
LINC01397-201ENST00000554808 NEK4P51957 841 aa9.4□□□□□ -0.9
LINC01397-201ENST00000554808 MKRN3Q13064 507 aaKnown RBP9.4□□□□□ -0.9
LINC01397-201ENST00000554808 LBX2Q6XYB7 198 aa9.4□□□□□ -0.9
LINC01397-201ENST00000554808 CATSPERGQ6ZRH7 1159 aa9.4□□□□□ -0.9
LINC01397-201ENST00000554808 CHST3Q7LGC8 479 aa9.4□□□□□ -0.9
LINC01397-201ENST00000554808 CCDC84Q86UT8 332 aaPredicted RBP9.4□□□□□ -0.9
LINC01397-201ENST00000554808 LRRC47Q8N1G4 583 aaKnown RBP9.4□□□□□ -0.9
LINC01397-201ENST00000554808 PRPF38AQ8NAV1 312 aaKnown RBP9.4□□□□□ -0.9
LINC01397-201ENST00000554808 BRI3BPQ8WY22 251 aa9.4□□□□□ -0.9
LINC01397-201ENST00000554808 BRF1Q92994 677 aa9.4□□□□□ -0.9
LINC01397-201ENST00000554808 ZNF274Q96GC6 653 aaPredicted RBP9.4□□□□□ -0.9
LINC01397-201ENST00000554808 LZTS2Q9BRK4 669 aa9.4□□□□□ -0.9
LINC01397-201ENST00000554808 UPF3BQ9BZI7 483 aaKnown RBP9.4□□□□□ -0.9
LINC01397-201ENST00000554808 TANGO6Q9C0B7 1094 aa9.4□□□□□ -0.9
LINC01397-201ENST00000554808 RPAP3Q9H6T3 665 aaPredicted RBP9.4□□□□□ -0.9
LINC01397-201ENST00000554808 HOXC10Q9NYD6 342 aa9.4□□□□□ -0.9
LINC01397-201ENST00000554808 KIAA1217Q5T5P2 1943 aa9.39□□□□□ -0.91
LINC01397-201ENST00000554808 MYH15Q9Y2K3 1946 aa9.39□□□□□ -0.91
LINC01397-201ENST00000554808 CCDC85CA6NKD9 419 aa9.39□□□□□ -0.91
LINC01397-201ENST00000554808 BTBD19C9JJ37 291 aa9.39□□□□□ -0.91
LINC01397-201ENST00000554808 PDHXO00330 501 aa9.39□□□□□ -0.91
LINC01397-201ENST00000554808 ZBTB43O43298 467 aa9.39□□□□□ -0.91
LINC01397-201ENST00000554808 DHX16O60231 1041 aaKnown RBP9.39□□□□□ -0.91
LINC01397-201ENST00000554808 ZNF543Q08ER8 600 aa9.39□□□□□ -0.91
LINC01397-201ENST00000554808 TROAPQ12815 778 aa9.39□□□□□ -0.91
LINC01397-201ENST00000554808 TRAF1Q13077 416 aa9.39□□□□□ -0.91
LINC01397-201ENST00000554808 MOGSQ13724 837 aa9.39□□□□□ -0.91
LINC01397-201ENST00000554808 COG2Q14746 738 aa9.39□□□□□ -0.91
LINC01397-201ENST00000554808 GRM4Q14833 912 aa9.39□□□□□ -0.91
LINC01397-201ENST00000554808 TAF1CQ15572 869 aaPredicted RBP9.39□□□□□ -0.91
LINC01397-201ENST00000554808 CCDC96Q2M329 555 aa9.39□□□□□ -0.91
LINC01397-201ENST00000554808 NOM1Q5C9Z4 860 aaKnown RBP9.39□□□□□ -0.91
LINC01397-201ENST00000554808 GPAT2Q6NUI2 795 aa9.39□□□□□ -0.91
LINC01397-201ENST00000554808 BTNL9Q6UXG8 535 aa9.39□□□□□ -0.91
LINC01397-201ENST00000554808 SMCR8Q8TEV9 937 aaPredicted RBP9.39□□□□□ -0.91
LINC01397-201ENST00000554808 ZSCAN31Q96LW9 406 aaPredicted RBP9.39□□□□□ -0.91
LINC01397-201ENST00000554808 KIF2CQ99661 725 aa9.39□□□□□ -0.91
LINC01397-201ENST00000554808 ZFYVE28Q9HCC9 887 aa9.39□□□□□ -0.91
LINC01397-201ENST00000554808 SH2B1Q9NRF2 756 aaPredicted RBP9.39□□□□□ -0.91
LINC01397-201ENST00000554808 RBM27Q9P2N5 1060 aaKnown RBP9.39□□□□□ -0.91
LINC01397-201ENST00000554808 MCM3APO60318 1980 aa9.39□□□□□ -0.91
LINC01397-201ENST00000554808 MKI67P46013 3256 aaKnown RBP9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms