RNA–Protein interactions for RNA: ENST00000554624.5

PSMC1-204, Transcript of proteasome 26S subunit, ATPase 1, humanhuman

TSL 2

Gene PSMC1, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC1-204ENST00000554624 COL2A1P02458 1487 aaPredicted RBP12.18□□□□□ -0.46
PSMC1-204ENST00000554624 FAM196BA6NMK8 535 aa12.17□□□□□ -0.46
PSMC1-204ENST00000554624 APBB1O00213 710 aa12.17□□□□□ -0.46
PSMC1-204ENST00000554624 CCDC84Q86UT8 332 aaPredicted RBP12.17□□□□□ -0.46
PSMC1-204ENST00000554624 CRACR2BQ8N4Y2 399 aaPredicted RBP12.17□□□□□ -0.46
PSMC1-204ENST00000554624 DEFB118Q96PH6 123 aa12.17□□□□□ -0.46
PSMC1-204ENST00000554624 SNRKQ9NRH2 765 aa12.17□□□□□ -0.46
PSMC1-204ENST00000554624 GJD2Q9UKL4 321 aa12.17□□□□□ -0.46
PSMC1-204ENST00000554624 AK9Q5TCS8 1911 aa12.16□□□□□ -0.46
PSMC1-204ENST00000554624 USP17L10C9JJH3 530 aa12.16□□□□□ -0.46
PSMC1-204ENST00000554624 ZBTB7BO15156 539 aaPredicted RBP12.16□□□□□ -0.46
PSMC1-204ENST00000554624 CYP2E1P05181 493 aaPredicted RBP12.16□□□□□ -0.46
PSMC1-204ENST00000554624 HLA-DOAP06340 250 aa12.16□□□□□ -0.46
PSMC1-204ENST00000554624 IRX3P78415 501 aaPredicted RBP12.16□□□□□ -0.46
PSMC1-204ENST00000554624 RRP1BQ14684 758 aaKnown RBP12.16□□□□□ -0.46
PSMC1-204ENST00000554624 NECAB2Q7Z6G3 386 aa12.16□□□□□ -0.46
PSMC1-204ENST00000554624 ANKLE1Q8NAG6 615 aa12.16□□□□□ -0.46
PSMC1-204ENST00000554624 GPRC5AQ8NFJ5 357 aa12.16□□□□□ -0.46
PSMC1-204ENST00000554624 DBNDD2Q9BQY9 259 aa12.16□□□□□ -0.46
PSMC1-204ENST00000554624 HMX1Q9NP08 348 aaPredicted RBP12.16□□□□□ -0.46
PSMC1-204ENST00000554624 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.16□□□□□ -0.46
PSMC1-204ENST00000554624 MORF4L1Q9UBU8 362 aa12.16□□□□□ -0.46
PSMC1-204ENST00000554624 RPTORQ8N122 1335 aa12.15□□□□□ -0.46
PSMC1-204ENST00000554624 HMGCRP04035 888 aa12.15□□□□□ -0.46
PSMC1-204ENST00000554624 XRCC5P13010 732 aaKnown RBP12.15□□□□□ -0.46
PSMC1-204ENST00000554624 FTSJ3Q8IY81 847 aaKnown RBP12.15□□□□□ -0.46
PSMC1-204ENST00000554624 TRMT44Q8IYL2 757 aaKnown RBP12.15□□□□□ -0.46
PSMC1-204ENST00000554624 GTF3C2Q8WUA4 911 aaPredicted RBP12.15□□□□□ -0.46
PSMC1-204ENST00000554624 P2RX7Q99572 595 aaKnown RBP12.15□□□□□ -0.46
PSMC1-204ENST00000554624 PALD1Q9ULE6 856 aa12.15□□□□□ -0.46
PSMC1-204ENST00000554624 TNNQ9UQP3 1299 aa12.15□□□□□ -0.46
PSMC1-204ENST00000554624 A0A1W2PPC1 479 aa12.14□□□□□ -0.47
PSMC1-204ENST00000554624 CCNYL3P0C7X3 344 aa12.14□□□□□ -0.47
PSMC1-204ENST00000554624 CYP7A1P22680 504 aa12.14□□□□□ -0.47
PSMC1-204ENST00000554624 ZAP70P43403 619 aa12.14□□□□□ -0.47
PSMC1-204ENST00000554624 MAPKAPK5Q8IW41 473 aa12.14□□□□□ -0.47
PSMC1-204ENST00000554624 CCAR1Q8IX12 1150 aaKnown RBP12.14□□□□□ -0.47
PSMC1-204ENST00000554624 NUDT12Q9BQG2 462 aa12.14□□□□□ -0.47
PSMC1-204ENST00000554624 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.14□□□□□ -0.47
PSMC1-204ENST00000554624 FLT1P17948 1338 aa12.13□□□□□ -0.47
PSMC1-204ENST00000554624 MYH2Q9UKX2 1941 aa12.13□□□□□ -0.47
PSMC1-204ENST00000554624 MAPK4P31152 587 aa12.13□□□□□ -0.47
PSMC1-204ENST00000554624 HERVK_113P62684 666 aa12.13□□□□□ -0.47
PSMC1-204ENST00000554624 MAP3K12Q12852 859 aa12.13□□□□□ -0.47
PSMC1-204ENST00000554624 MCM6Q14566 821 aa12.13□□□□□ -0.47
PSMC1-204ENST00000554624 HSP90AB4PQ58FF6 505 aa12.13□□□□□ -0.47
PSMC1-204ENST00000554624 PPP1R18Q6NYC8 613 aa12.13□□□□□ -0.47
PSMC1-204ENST00000554624 USP17L2Q6R6M4 530 aa12.13□□□□□ -0.47
PSMC1-204ENST00000554624 TTC6Q86TZ1 520 aa12.13□□□□□ -0.47
PSMC1-204ENST00000554624 ERC1Q8IUD2 1116 aa12.13□□□□□ -0.47
PSMC1-204ENST00000554624 SOCS4Q8WXH5 440 aa12.13□□□□□ -0.47
PSMC1-204ENST00000554624 PAWRQ96IZ0 340 aaKnown RBP12.13□□□□□ -0.47
PSMC1-204ENST00000554624 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.13□□□□□ -0.47
PSMC1-204ENST00000554624 PRO3102Q9H379 93 aa12.13□□□□□ -0.47
PSMC1-204ENST00000554624 IDH1O75874 414 aaKnown RBP12.12□□□□□ -0.47
PSMC1-204ENST00000554624 USP5P45974 858 aa12.12□□□□□ -0.47
PSMC1-204ENST00000554624 USP14P54578 494 aa12.12□□□□□ -0.47
PSMC1-204ENST00000554624 PDE3AQ14432 1141 aa12.12□□□□□ -0.47
PSMC1-204ENST00000554624 TATDN1Q6P1N9 297 aa12.12□□□□□ -0.47
PSMC1-204ENST00000554624 ADGRA1Q86SQ6 560 aa12.12□□□□□ -0.47
PSMC1-204ENST00000554624 ITPRIPQ8IWB1 547 aa12.12□□□□□ -0.47
PSMC1-204ENST00000554624 EAF2Q96CJ1 260 aaPredicted RBP12.12□□□□□ -0.47
PSMC1-204ENST00000554624 CCDC8Q9H0W5 538 aaPredicted RBP12.12□□□□□ -0.47
PSMC1-204ENST00000554624 PIH1D3Q9NQM4 214 aaKnown RBP12.12□□□□□ -0.47
PSMC1-204ENST00000554624 EVA1BQ9NVM1 165 aa12.12□□□□□ -0.47
PSMC1-204ENST00000554624 RBPJLQ9UBG7 517 aa12.12□□□□□ -0.47
PSMC1-204ENST00000554624 DBNLQ9UJU6 430 aaKnown RBP12.12□□□□□ -0.47
PSMC1-204ENST00000554624 ZBTB21Q9ULJ3 1066 aa12.12□□□□□ -0.47
PSMC1-204ENST00000554624 MYH13Q9UKX3 1938 aa12.11□□□□□ -0.47
PSMC1-204ENST00000554624 USP17L15C9J2P7 530 aa12.11□□□□□ -0.47
PSMC1-204ENST00000554624 USP17L13C9JLJ4 530 aa12.11□□□□□ -0.47
PSMC1-204ENST00000554624 USP17L11C9JVI0 530 aa12.11□□□□□ -0.47
PSMC1-204ENST00000554624 USP17L18D6R9N7 530 aa12.11□□□□□ -0.47
PSMC1-204ENST00000554624 USP17L22D6RA61 530 aa12.11□□□□□ -0.47
PSMC1-204ENST00000554624 USP17L17D6RBQ6 530 aa12.11□□□□□ -0.47
PSMC1-204ENST00000554624 USP17L19D6RCP7 530 aa12.11□□□□□ -0.47
PSMC1-204ENST00000554624 USP17L20D6RJB6 530 aa12.11□□□□□ -0.47
PSMC1-204ENST00000554624 RNF223E7ERA6 249 aa12.11□□□□□ -0.47
PSMC1-204ENST00000554624 GLRX3O76003 335 aaKnown RBP12.11□□□□□ -0.47
PSMC1-204ENST00000554624 F12P00748 615 aaPredicted RBP12.11□□□□□ -0.47
PSMC1-204ENST00000554624 CYP2B6P20813 491 aa12.11□□□□□ -0.47
PSMC1-204ENST00000554624 CCNA1P78396 465 aa12.11□□□□□ -0.47
PSMC1-204ENST00000554624 JAG1P78504 1218 aa12.11□□□□□ -0.47
PSMC1-204ENST00000554624 USP17L24Q0WX57 530 aa12.11□□□□□ -0.47
PSMC1-204ENST00000554624 TTF1Q15361 905 aaPredicted RBP12.11□□□□□ -0.47
PSMC1-204ENST00000554624 EHD4Q9H223 541 aa12.11□□□□□ -0.47
PSMC1-204ENST00000554624 DNAJC18Q9H819 358 aa12.11□□□□□ -0.47
PSMC1-204ENST00000554624 SAP30BPQ9UHR5 308 aaKnown RBP12.11□□□□□ -0.47
PSMC1-204ENST00000554624 SERPINB13Q9UIV8 391 aa12.11□□□□□ -0.47
PSMC1-204ENST00000554624 GDF11O95390 407 aa12.1□□□□□ -0.47
PSMC1-204ENST00000554624 GH2P01242 217 aa12.1□□□□□ -0.47
PSMC1-204ENST00000554624 BMP8BP34820 402 aa12.1□□□□□ -0.47
PSMC1-204ENST00000554624 ERVK-9P63128 1117 aa12.1□□□□□ -0.47
PSMC1-204ENST00000554624 ERVK-24P63145 666 aa12.1□□□□□ -0.47
PSMC1-204ENST00000554624 DYNLL1P63167 89 aaKnown RBP12.1□□□□□ -0.47
PSMC1-204ENST00000554624 CERKLQ49MI3 558 aaPredicted RBP12.1□□□□□ -0.47
PSMC1-204ENST00000554624 MAP3K21Q5TCX8 1036 aa12.1□□□□□ -0.47
PSMC1-204ENST00000554624 MAGEB6Q8N7X4 407 aa12.1□□□□□ -0.47
PSMC1-204ENST00000554624 C12orf42Q96LP6 360 aa12.1□□□□□ -0.47
PSMC1-204ENST00000554624 CABP5Q9NP86 173 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms