RNA–Protein interactions for RNA: ENST00000554303.1

RPGRIP1-205, Transcript of RPGR interacting protein 1, humanhuman

TSL 1 (best)

Gene RPGRIP1, Length 429 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1-205ENST00000554303 SAMD3Q8N6K7 520 aa3.35□□□□□ -1.87
RPGRIP1-205ENST00000554303 TOP6BLQ8N6T0 577 aa3.35□□□□□ -1.87
RPGRIP1-205ENST00000554303 GOLGA1Q92805 767 aa3.35□□□□□ -1.87
RPGRIP1-205ENST00000554303 MISP3Q96FF7 219 aa3.35□□□□□ -1.87
RPGRIP1-205ENST00000554303 ZNF830Q96NB3 372 aaPredicted RBP3.35□□□□□ -1.87
RPGRIP1-205ENST00000554303 FRMD6Q96NE9 622 aa3.35□□□□□ -1.87
RPGRIP1-205ENST00000554303 MYCBPQ99417 103 aaPredicted RBP3.35□□□□□ -1.87
RPGRIP1-205ENST00000554303 LNPKQ9C0E8 428 aa3.35□□□□□ -1.87
RPGRIP1-205ENST00000554303 TSPYL1Q9H0U9 437 aa3.35□□□□□ -1.87
RPGRIP1-205ENST00000554303 TNKS2Q9H2K2 1166 aa3.35□□□□□ -1.87
RPGRIP1-205ENST00000554303 RANBP17Q9H2T7 1088 aaKnown RBP3.35□□□□□ -1.87
RPGRIP1-205ENST00000554303 MKNK2Q9HBH9 465 aa3.35□□□□□ -1.87
RPGRIP1-205ENST00000554303 MAP3K20Q9NYL2 800 aaKnown RBP3.35□□□□□ -1.87
RPGRIP1-205ENST00000554303 SMC3Q9UQE7 1217 aa3.35□□□□□ -1.87
RPGRIP1-205ENST00000554303 NISCHQ9Y2I1 1504 aa3.34□□□□□ -1.87
RPGRIP1-205ENST00000554303 GOLGA6L6A8MZA4 724 aa3.34□□□□□ -1.87
RPGRIP1-205ENST00000554303 IFRD1O00458 451 aaPredicted RBP3.34□□□□□ -1.87
RPGRIP1-205ENST00000554303 EOMESO95936 686 aa3.34□□□□□ -1.87
RPGRIP1-205ENST00000554303 CEACAM5P06731 702 aa3.34□□□□□ -1.87
RPGRIP1-205ENST00000554303 RPL17P18621 184 aaKnown RBP3.34□□□□□ -1.87
RPGRIP1-205ENST00000554303 ATICP31939 592 aa3.34□□□□□ -1.87
RPGRIP1-205ENST00000554303 MAPK8P45983 427 aa3.34□□□□□ -1.87
RPGRIP1-205ENST00000554303 EIF5P55010 431 aaKnown RBP3.34□□□□□ -1.87
RPGRIP1-205ENST00000554303 JAG1P78504 1218 aa3.34□□□□□ -1.87
RPGRIP1-205ENST00000554303 TMED1Q13445 227 aa3.34□□□□□ -1.87
RPGRIP1-205ENST00000554303 SAFB2Q14151 953 aaKnown RBP eCLIP3.34□□□□□ -1.87
RPGRIP1-205ENST00000554303 INPP5AQ14642 412 aa3.34□□□□□ -1.87
RPGRIP1-205ENST00000554303 KCTD2Q14681 263 aa3.34□□□□□ -1.87
RPGRIP1-205ENST00000554303 NFE2L2Q16236 605 aa3.34□□□□□ -1.87
RPGRIP1-205ENST00000554303 NKPD1Q17RQ9 610 aa3.34□□□□□ -1.87
RPGRIP1-205ENST00000554303 PLEKHG6Q3KR16 790 aa3.34□□□□□ -1.87
RPGRIP1-205ENST00000554303 MTERF4Q7Z6M4 381 aaKnown RBP3.34□□□□□ -1.87
RPGRIP1-205ENST00000554303 LRRN4CLQ8ND94 238 aa3.34□□□□□ -1.87
RPGRIP1-205ENST00000554303 VPS37AQ8NEZ2 397 aa3.34□□□□□ -1.87
RPGRIP1-205ENST00000554303 ATL2Q8NHH9 583 aa3.34□□□□□ -1.87
RPGRIP1-205ENST00000554303 ANKRD24Q8TF21 1146 aa3.34□□□□□ -1.87
RPGRIP1-205ENST00000554303 FRS2Q8WU20 508 aa3.34□□□□□ -1.87
RPGRIP1-205ENST00000554303 POLR3CQ9BUI4 534 aaPredicted RBP3.34□□□□□ -1.87
RPGRIP1-205ENST00000554303 EMILIN2Q9BXX0 1053 aa3.34□□□□□ -1.87
RPGRIP1-205ENST00000554303 ZNF700Q9H0M5 742 aa3.34□□□□□ -1.87
RPGRIP1-205ENST00000554303 SUDS3Q9H7L9 328 aaPredicted RBP3.34□□□□□ -1.87
RPGRIP1-205ENST00000554303 CBX8Q9HC52 389 aa3.34□□□□□ -1.87
RPGRIP1-205ENST00000554303 SSU72Q9NP77 194 aaKnown RBP3.34□□□□□ -1.87
RPGRIP1-205ENST00000554303 PRDM7Q9NQW5 492 aa3.34□□□□□ -1.87
RPGRIP1-205ENST00000554303 TCEAL9Q9UHQ7 104 aa3.34□□□□□ -1.87
RPGRIP1-205ENST00000554303 PRKAB1Q9Y478 270 aa3.34□□□□□ -1.87
RPGRIP1-205ENST00000554303 WASHC2CQ9Y4E1 1318 aa3.34□□□□□ -1.87
RPGRIP1-205ENST00000554303 TMEM265A0A087WTH1 108 aa3.33□□□□□ -1.88
RPGRIP1-205ENST00000554303 CCDC163A0A0D9SF12 145 aa3.33□□□□□ -1.88
RPGRIP1-205ENST00000554303 IGF2BP3O00425 579 aaKnown RBP eCLIP3.33□□□□□ -1.88
RPGRIP1-205ENST00000554303 CTAGE5O15320 804 aa3.33□□□□□ -1.88
RPGRIP1-205ENST00000554303 TRIM37O94972 964 aa3.33□□□□□ -1.88
RPGRIP1-205ENST00000554303 FOSP01100 380 aaPredicted RBP3.33□□□□□ -1.88
RPGRIP1-205ENST00000554303 S100BP04271 92 aaPredicted RBP3.33□□□□□ -1.88
RPGRIP1-205ENST00000554303 CELA3AP09093 270 aa3.33□□□□□ -1.88
RPGRIP1-205ENST00000554303 PSMA3P25788 255 aa3.33□□□□□ -1.88
RPGRIP1-205ENST00000554303 GSTT1P30711 240 aa3.33□□□□□ -1.88
RPGRIP1-205ENST00000554303 ITGAEP38570 1179 aa3.33□□□□□ -1.88
RPGRIP1-205ENST00000554303 TNNT2P45379 298 aaPredicted RBP3.33□□□□□ -1.88
RPGRIP1-205ENST00000554303 TRPC1P48995 793 aa3.33□□□□□ -1.88
RPGRIP1-205ENST00000554303 CDK8P49336 464 aa3.33□□□□□ -1.88
RPGRIP1-205ENST00000554303 RBL2Q08999 1139 aa3.33□□□□□ -1.88
RPGRIP1-205ENST00000554303 PSMD2Q13200 908 aa3.33□□□□□ -1.88
RPGRIP1-205ENST00000554303 DHX8Q14562 1220 aaKnown RBP3.33□□□□□ -1.88
RPGRIP1-205ENST00000554303 CCDC92Q53HC0 331 aaPredicted RBP3.33□□□□□ -1.88
RPGRIP1-205ENST00000554303 ZNF648Q5T619 568 aaPredicted RBP3.33□□□□□ -1.88
RPGRIP1-205ENST00000554303 ZBTB37Q5TC79 503 aa3.33□□□□□ -1.88
RPGRIP1-205ENST00000554303 ATG4DQ86TL0 474 aaPredicted RBP3.33□□□□□ -1.88
RPGRIP1-205ENST00000554303 LCA5Q86VQ0 697 aa3.33□□□□□ -1.88
RPGRIP1-205ENST00000554303 NT5DC4Q86YG4 428 aa3.33□□□□□ -1.88
RPGRIP1-205ENST00000554303 SPACA3Q8IXA5 215 aa3.33□□□□□ -1.88
RPGRIP1-205ENST00000554303 ZNF513Q8N8E2 541 aaPredicted RBP3.33□□□□□ -1.88
RPGRIP1-205ENST00000554303 PI4K2BQ8TCG2 481 aa3.33□□□□□ -1.88
RPGRIP1-205ENST00000554303 GIPC2Q8TF65 315 aa3.33□□□□□ -1.88
RPGRIP1-205ENST00000554303 IL17RAQ96F46 866 aa3.33□□□□□ -1.88
RPGRIP1-205ENST00000554303 ZNF512BQ96KM6 892 aaPredicted RBP3.33□□□□□ -1.88
RPGRIP1-205ENST00000554303 ASB16Q96NS5 453 aa3.33□□□□□ -1.88
RPGRIP1-205ENST00000554303 PCDH12Q9NPG4 1184 aa3.33□□□□□ -1.88
RPGRIP1-205ENST00000554303 RNF19AQ9NV58 838 aa3.33□□□□□ -1.88
RPGRIP1-205ENST00000554303 THRAP3Q9Y2W1 955 aaKnown RBP3.33□□□□□ -1.88
RPGRIP1-205ENST00000554303 COL4A3BPQ9Y5P4 624 aa3.33□□□□□ -1.88
RPGRIP1-205ENST00000554303 NPHP1O15259 732 aa3.32□□□□□ -1.88
RPGRIP1-205ENST00000554303 FANCGO15287 622 aa3.32□□□□□ -1.88
RPGRIP1-205ENST00000554303 CT47B1P0C2W7 299 aaPredicted RBP3.32□□□□□ -1.88
RPGRIP1-205ENST00000554303 ITIH2P19823 946 aa3.32□□□□□ -1.88
RPGRIP1-205ENST00000554303 ATP2B1P20020 1258 aa3.32□□□□□ -1.88
RPGRIP1-205ENST00000554303 ERCC5P28715 1186 aaPredicted RBP3.32□□□□□ -1.88
RPGRIP1-205ENST00000554303 TDO2P48775 406 aa3.32□□□□□ -1.88
RPGRIP1-205ENST00000554303 CLK1P49759 484 aaKnown RBP3.32□□□□□ -1.88
RPGRIP1-205ENST00000554303 EVA1CP58658 441 aa3.32□□□□□ -1.88
RPGRIP1-205ENST00000554303 LMOD3Q0VAK6 560 aa3.32□□□□□ -1.88
RPGRIP1-205ENST00000554303 RAPGEF1Q13905 1077 aa3.32□□□□□ -1.88
RPGRIP1-205ENST00000554303 ZNF124Q15973 351 aa3.32□□□□□ -1.88
RPGRIP1-205ENST00000554303 FAM133BQ5BKY9 247 aaKnown RBP3.32□□□□□ -1.88
RPGRIP1-205ENST00000554303 LCE1DQ5T752 114 aa3.32□□□□□ -1.88
RPGRIP1-205ENST00000554303 UBE2Q1Q7Z7E8 422 aa3.32□□□□□ -1.88
RPGRIP1-205ENST00000554303 TEX19Q8NA77 164 aa3.32□□□□□ -1.88
RPGRIP1-205ENST00000554303 CCDC191Q8NCU4 936 aa3.32□□□□□ -1.88
RPGRIP1-205ENST00000554303 MNS1Q8NEH6 495 aa3.32□□□□□ -1.88
RPGRIP1-205ENST00000554303 RIN3Q8TB24 985 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms