RNA–Protein interactions for RNA: ENST00000554258.1

NEK9-204, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-204ENST00000554258 AKR1A1P14550 325 aa20.7■□□□□ 0.9
NEK9-204ENST00000554258 METTL16Q86W50 562 aaKnown RBP20.7■□□□□ 0.9
NEK9-204ENST00000554258 ABRAQ8N0Z2 381 aa20.7■□□□□ 0.9
NEK9-204ENST00000554258 GLT1D1Q96MS3 346 aa20.7■□□□□ 0.9
NEK9-204ENST00000554258 SPATC1LQ9H0A9 340 aa20.7■□□□□ 0.9
NEK9-204ENST00000554258 RPAP3Q9H6T3 665 aaPredicted RBP20.7■□□□□ 0.9
NEK9-204ENST00000554258 CERS4Q9HA82 394 aa20.7■□□□□ 0.9
NEK9-204ENST00000554258 ROBO3Q96MS0 1386 aa20.7■□□□□ 0.9
NEK9-204ENST00000554258 TRIOO75962 3097 aa20.69■□□□□ 0.9
NEK9-204ENST00000554258 SSTR3P32745 418 aaPredicted RBP20.69■□□□□ 0.9
NEK9-204ENST00000554258 NSUN4Q96CB9 384 aaKnown RBP20.69■□□□□ 0.9
NEK9-204ENST00000554258 NOL10Q9BSC4 688 aaKnown RBP20.69■□□□□ 0.9
NEK9-204ENST00000554258 TLR3O15455 904 aaKnown RBP20.68■□□□□ 0.9
NEK9-204ENST00000554258 TAL1P17542 331 aaPredicted RBP20.68■□□□□ 0.9
NEK9-204ENST00000554258 CDK7P50613 346 aa20.68■□□□□ 0.9
NEK9-204ENST00000554258 KCNA10Q16322 511 aa20.68■□□□□ 0.9
NEK9-204ENST00000554258 NCAPG2Q86XI2 1143 aa20.68■□□□□ 0.9
NEK9-204ENST00000554258 VTI1AQ96AJ9 217 aa20.68■□□□□ 0.9
NEK9-204ENST00000554258 KIAA1683Q9H0B3 1180 aa20.68■□□□□ 0.9
NEK9-204ENST00000554258 MROH8Q9H579 483 aa20.68■□□□□ 0.9
NEK9-204ENST00000554258 FOCADQ5VW36 1801 aa20.68■□□□□ 0.9
NEK9-204ENST00000554258 ELP1O95163 1332 aa20.68■□□□□ 0.9
NEK9-204ENST00000554258 SYNRGQ9UMZ2 1314 aa20.68■□□□□ 0.9
NEK9-204ENST00000554258 PLS1Q14651 629 aa20.67■□□□□ 0.9
NEK9-204ENST00000554258 MAPKAPK5Q8IW41 473 aa20.67■□□□□ 0.9
NEK9-204ENST00000554258 RCAN3Q9UKA8 241 aa20.67■□□□□ 0.9
NEK9-204ENST00000554258 PALD1Q9ULE6 856 aa20.67■□□□□ 0.9
NEK9-204ENST00000554258 C5orf42Q9H799 3197 aa20.67■□□□□ 0.9
NEK9-204ENST00000554258 EPOPA6NHQ4 379 aa20.66■□□□□ 0.9
NEK9-204ENST00000554258 ZBBXA8MT70 800 aa20.66■□□□□ 0.9
NEK9-204ENST00000554258 BCAR3O75815 825 aa20.66■□□□□ 0.9
NEK9-204ENST00000554258 CIAO1O76071 339 aa20.66■□□□□ 0.9
NEK9-204ENST00000554258 CA3P07451 260 aa20.66■□□□□ 0.9
NEK9-204ENST00000554258 FCER1AP12319 257 aa20.66■□□□□ 0.9
NEK9-204ENST00000554258 ATP2A2P16615 1042 aaKnown RBP20.66■□□□□ 0.9
NEK9-204ENST00000554258 RAB3GAP1Q15042 981 aa20.66■□□□□ 0.9
NEK9-204ENST00000554258 TMEM67Q5HYA8 995 aa20.66■□□□□ 0.9
NEK9-204ENST00000554258 FAM178BQ8IXR5 827 aa20.66■□□□□ 0.9
NEK9-204ENST00000554258 PHOX2BQ99453 314 aa20.66■□□□□ 0.9
NEK9-204ENST00000554258 TINF2Q9BSI4 451 aa20.66■□□□□ 0.9
NEK9-204ENST00000554258 SMC4Q9NTJ3 1288 aa20.66■□□□□ 0.9
NEK9-204ENST00000554258 HOXC10Q9NYD6 342 aa20.66■□□□□ 0.9
NEK9-204ENST00000554258 RAI14Q9P0K7 980 aa20.66■□□□□ 0.9
NEK9-204ENST00000554258 FBXO3Q9UK99 471 aa20.66■□□□□ 0.9
NEK9-204ENST00000554258 ZFHX2Q9C0A1 2572 aaPredicted RBP20.65■□□□□ 0.9
NEK9-204ENST00000554258 ARVCFO00192 962 aa20.65■□□□□ 0.9
NEK9-204ENST00000554258 ATF7IPQ6VMQ6 1270 aa20.65■□□□□ 0.9
NEK9-204ENST00000554258 FAM126BQ8IXS8 530 aa20.65■□□□□ 0.9
NEK9-204ENST00000554258 KLHDC9Q8NEP7 349 aa20.65■□□□□ 0.9
NEK9-204ENST00000554258 ACER1Q8TDN7 264 aa20.65■□□□□ 0.9
NEK9-204ENST00000554258 TGFBRAP1Q8WUH2 860 aa20.65■□□□□ 0.9
NEK9-204ENST00000554258 ARNTL2Q8WYA1 636 aa20.65■□□□□ 0.9
NEK9-204ENST00000554258 FLT1P17948 1338 aa20.64■□□□□ 0.89
NEK9-204ENST00000554258 A0A0U1RQG5 324 aaPredicted RBP20.64■□□□□ 0.89
NEK9-204ENST00000554258 ZNF865P0CJ78 1059 aaPredicted RBP20.64■□□□□ 0.89
NEK9-204ENST00000554258 COG2Q14746 738 aa20.64■□□□□ 0.89
NEK9-204ENST00000554258 CCSAPQ6IQ19 270 aaPredicted RBP20.64■□□□□ 0.89
NEK9-204ENST00000554258 CNPY2Q9Y2B0 182 aa20.64■□□□□ 0.89
NEK9-204ENST00000554258 PTPRZ1P23471 2315 aaPredicted RBP20.64■□□□□ 0.89
NEK9-204ENST00000554258 HLA-DOAP06340 250 aa20.63■□□□□ 0.89
NEK9-204ENST00000554258 TBC1D9Q6ZT07 1266 aa20.63■□□□□ 0.89
NEK9-204ENST00000554258 ARHGAP45Q92619 1136 aa20.63■□□□□ 0.89
NEK9-204ENST00000554258 TANGO6Q9C0B7 1094 aa20.63■□□□□ 0.89
NEK9-204ENST00000554258 HIPK3Q9H422 1215 aa20.63■□□□□ 0.89
NEK9-204ENST00000554258 SAP30BPQ9UHR5 308 aaKnown RBP20.63■□□□□ 0.89
NEK9-204ENST00000554258 PTPRCP08575 1304 aa20.62■□□□□ 0.89
NEK9-204ENST00000554258 MYADML2A6NDP7 307 aa20.62■□□□□ 0.89
NEK9-204ENST00000554258 DCXO43602 365 aa20.62■□□□□ 0.89
NEK9-204ENST00000554258 BAG3O95817 575 aa20.62■□□□□ 0.89
NEK9-204ENST00000554258 PLCG2P16885 1265 aa20.62■□□□□ 0.89
NEK9-204ENST00000554258 TIMM10P62072 90 aa20.62■□□□□ 0.89
NEK9-204ENST00000554258 MB21D1Q8N884 522 aa20.62■□□□□ 0.89
NEK9-204ENST00000554258 PCSK9Q8NBP7 692 aaKnown RBP20.62■□□□□ 0.89
NEK9-204ENST00000554258 AATFQ9NY61 560 aaKnown RBP eCLIP20.62■□□□□ 0.89
NEK9-204ENST00000554258 MYH1P12882 1939 aa20.62■□□□□ 0.89
NEK9-204ENST00000554258 PGK2P07205 417 aa20.61■□□□□ 0.89
NEK9-204ENST00000554258 ASGR1P07306 291 aa20.61■□□□□ 0.89
NEK9-204ENST00000554258 IL15P40933 162 aaPredicted RBP20.61■□□□□ 0.89
NEK9-204ENST00000554258 CCL23P55773 120 aa20.61■□□□□ 0.89
NEK9-204ENST00000554258 RPUSD2Q8IZ73 545 aaKnown RBP20.61■□□□□ 0.89
NEK9-204ENST00000554258 FAM184BQ9ULE4 1060 aa20.61■□□□□ 0.89
NEK9-204ENST00000554258 NOB1Q9ULX3 412 aaKnown RBP20.61■□□□□ 0.89
NEK9-204ENST00000554258 COL4A4P53420 1690 aaPredicted RBP20.61■□□□□ 0.89
NEK9-204ENST00000554258 UMODL1Q5DID0 1318 aa20.6■□□□□ 0.89
NEK9-204ENST00000554258 CD4P01730 458 aa20.6■□□□□ 0.89
NEK9-204ENST00000554258 C6orf222P0C671 652 aaPredicted RBP20.6■□□□□ 0.89
NEK9-204ENST00000554258 GRB10Q13322 594 aa20.6■□□□□ 0.89
NEK9-204ENST00000554258 SAMD1Q6SPF0 538 aaPredicted RBP20.6■□□□□ 0.89
NEK9-204ENST00000554258 MMP19Q99542 508 aa20.6■□□□□ 0.89
NEK9-204ENST00000554258 USP44Q9H0E7 712 aa20.6■□□□□ 0.89
NEK9-204ENST00000554258 HMG20BQ9P0W2 317 aa20.6■□□□□ 0.89
NEK9-204ENST00000554258 CST5P28325 142 aaPredicted RBP20.59■□□□□ 0.89
NEK9-204ENST00000554258 MVPQ14764 893 aaKnown RBP20.59■□□□□ 0.89
NEK9-204ENST00000554258 PI16Q6UXB8 463 aa20.59■□□□□ 0.89
NEK9-204ENST00000554258 SPATA5Q8NB90 893 aa20.59■□□□□ 0.89
NEK9-204ENST00000554258 LRP2BPQ9P2M1 347 aa20.59■□□□□ 0.89
NEK9-204ENST00000554258 COL11A1P12107 1806 aaPredicted RBP20.58■□□□□ 0.89
NEK9-204ENST00000554258 IPO8O15397 1037 aaKnown RBP20.58■□□□□ 0.89
NEK9-204ENST00000554258 DUSP11O75319 330 aaKnown RBP20.58■□□□□ 0.89
NEK9-204ENST00000554258 ABCB5Q2M3G0 1257 aa20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms