RNA–Protein interactions for RNA: ENST00000554178.1

PTPN21-204, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

TSL 3

Gene PTPN21, Length 822 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-204ENST00000554178 ERCC3P19447 782 aa11.83□□□□□ -0.52
PTPN21-204ENST00000554178 PLCD1P51178 756 aa11.83□□□□□ -0.52
PTPN21-204ENST00000554178 USP14P54578 494 aa11.83□□□□□ -0.52
PTPN21-204ENST00000554178 KIAA1755Q5JYT7 1200 aa11.83□□□□□ -0.52
PTPN21-204ENST00000554178 TATDN1Q6P1N9 297 aa11.83□□□□□ -0.52
PTPN21-204ENST00000554178 SLC39A5Q6ZMH5 540 aa11.83□□□□□ -0.52
PTPN21-204ENST00000554178 SPICE1Q8N0Z3 855 aa11.83□□□□□ -0.52
PTPN21-204ENST00000554178 TMEM57Q8N5G2 664 aa11.83□□□□□ -0.52
PTPN21-204ENST00000554178 USP38Q8NB14 1042 aa11.83□□□□□ -0.52
PTPN21-204ENST00000554178 TRIM43Q96BQ3 446 aaPredicted RBP11.83□□□□□ -0.52
PTPN21-204ENST00000554178 SEMA6BQ9H3T3 888 aa11.83□□□□□ -0.52
PTPN21-204ENST00000554178 GINM1Q9NU53 330 aa11.83□□□□□ -0.52
PTPN21-204ENST00000554178 A0A1W2PRG0 241 aa11.82□□□□□ -0.52
PTPN21-204ENST00000554178 COBLO75128 1261 aa11.82□□□□□ -0.52
PTPN21-204ENST00000554178 HOXC6P09630 235 aa11.82□□□□□ -0.52
PTPN21-204ENST00000554178 CT47B1P0C2W7 299 aaPredicted RBP11.82□□□□□ -0.52
PTPN21-204ENST00000554178 CYP2D6P10635 497 aa11.82□□□□□ -0.52
PTPN21-204ENST00000554178 ITGB8P26012 769 aa11.82□□□□□ -0.52
PTPN21-204ENST00000554178 EPHB4P54760 987 aa11.82□□□□□ -0.52
PTPN21-204ENST00000554178 NCAPG2Q86XI2 1143 aa11.82□□□□□ -0.52
PTPN21-204ENST00000554178 EFCAB3Q8N7B9 438 aa11.82□□□□□ -0.52
PTPN21-204ENST00000554178 ATG4CQ96DT6 458 aa11.82□□□□□ -0.52
PTPN21-204ENST00000554178 RNPC3Q96LT9 517 aaKnown RBP11.82□□□□□ -0.52
PTPN21-204ENST00000554178 SPATC1LQ9H0A9 340 aa11.82□□□□□ -0.52
PTPN21-204ENST00000554178 CABP5Q9NP86 173 aa11.82□□□□□ -0.52
PTPN21-204ENST00000554178 PQBP1O60828 265 aaKnown RBP11.81□□□□□ -0.52
PTPN21-204ENST00000554178 POLR3DP05423 398 aaPredicted RBP11.81□□□□□ -0.52
PTPN21-204ENST00000554178 TLE2Q04725 743 aa11.81□□□□□ -0.52
PTPN21-204ENST00000554178 LRRC41Q15345 812 aa11.81□□□□□ -0.52
PTPN21-204ENST00000554178 EHD4Q9H223 541 aa11.81□□□□□ -0.52
PTPN21-204ENST00000554178 PRDM6Q9NQX0 595 aa11.81□□□□□ -0.52
PTPN21-204ENST00000554178 RAPGEFL1Q9UHV5 662 aa11.81□□□□□ -0.52
PTPN21-204ENST00000554178 REV3LO60673 3130 aa11.81□□□□□ -0.52
PTPN21-204ENST00000554178 SMIM22K7EJ46 135 aa11.8□□□□□ -0.52
PTPN21-204ENST00000554178 SEPT4O43236 478 aa11.8□□□□□ -0.52
PTPN21-204ENST00000554178 FLOT1O75955 427 aa11.8□□□□□ -0.52
PTPN21-204ENST00000554178 PGK1P00558 417 aa11.8□□□□□ -0.52
PTPN21-204ENST00000554178 PGK2P07205 417 aa11.8□□□□□ -0.52
PTPN21-204ENST00000554178 SNX17Q15036 470 aa11.8□□□□□ -0.52
PTPN21-204ENST00000554178 OLFML2BQ68BL8 750 aa11.8□□□□□ -0.52
PTPN21-204ENST00000554178 LBX2Q6XYB7 198 aa11.8□□□□□ -0.52
PTPN21-204ENST00000554178 TTC6Q86TZ1 520 aa11.8□□□□□ -0.52
PTPN21-204ENST00000554178 ARRDC4Q8NCT1 418 aa11.8□□□□□ -0.52
PTPN21-204ENST00000554178 SDR42E1Q8WUS8 393 aa11.8□□□□□ -0.52
PTPN21-204ENST00000554178 PPM1EQ8WY54 764 aa11.8□□□□□ -0.52
PTPN21-204ENST00000554178 ARHGAP45Q92619 1136 aa11.8□□□□□ -0.52
PTPN21-204ENST00000554178 EAF2Q96CJ1 260 aaPredicted RBP11.8□□□□□ -0.52
PTPN21-204ENST00000554178 GPR108Q9NPR9 543 aa11.8□□□□□ -0.52
PTPN21-204ENST00000554178 MCM9Q9NXL9 1143 aa11.8□□□□□ -0.52
PTPN21-204ENST00000554178 SCN5AQ14524 2016 aa11.79□□□□□ -0.52
PTPN21-204ENST00000554178 IGHA2P01877 340 aa11.79□□□□□ -0.52
PTPN21-204ENST00000554178 TAL1P17542 331 aaPredicted RBP11.79□□□□□ -0.52
PTPN21-204ENST00000554178 SMAD3P84022 425 aaKnown RBP11.79□□□□□ -0.52
PTPN21-204ENST00000554178 SLFNL1Q499Z3 407 aa11.79□□□□□ -0.52
PTPN21-204ENST00000554178 SSH3Q8TE77 659 aa11.79□□□□□ -0.52
PTPN21-204ENST00000554178 DYNLL2Q96FJ2 89 aa11.79□□□□□ -0.52
PTPN21-204ENST00000554178 MAML3Q96JK9 1138 aa11.79□□□□□ -0.52
PTPN21-204ENST00000554178 XPNPEP3Q9NQH7 507 aa11.79□□□□□ -0.52
PTPN21-204ENST00000554178 EXOC6BQ9Y2D4 811 aa11.79□□□□□ -0.52
PTPN21-204ENST00000554178 LCTP09848 1927 aa11.79□□□□□ -0.52
PTPN21-204ENST00000554178 CYP2D7A0A087X1C5 515 aa11.78□□□□□ -0.52
PTPN21-204ENST00000554178 MAGEB6P1A0A0J9YX57 407 aa11.78□□□□□ -0.52
PTPN21-204ENST00000554178 A0A1W2PQ45 241 aaPredicted RBP11.78□□□□□ -0.52
PTPN21-204ENST00000554178 A0A1W2PQY0 241 aa11.78□□□□□ -0.52
PTPN21-204ENST00000554178 APBB1O00213 710 aa11.78□□□□□ -0.52
PTPN21-204ENST00000554178 RAD21O60216 631 aa11.78□□□□□ -0.52
PTPN21-204ENST00000554178 CLTBP09497 229 aa11.78□□□□□ -0.52
PTPN21-204ENST00000554178 AKR1B1P15121 316 aa11.78□□□□□ -0.52
PTPN21-204ENST00000554178 COG2Q14746 738 aa11.78□□□□□ -0.52
PTPN21-204ENST00000554178 GRIN2CQ14957 1233 aa11.78□□□□□ -0.52
PTPN21-204ENST00000554178 AACSQ86V21 672 aa11.78□□□□□ -0.52
PTPN21-204ENST00000554178 ITPRIPQ8IWB1 547 aa11.78□□□□□ -0.52
PTPN21-204ENST00000554178 LCORLQ8N3X6 602 aa11.78□□□□□ -0.52
PTPN21-204ENST00000554178 RIOK1Q9BRS2 568 aaKnown RBP11.78□□□□□ -0.52
PTPN21-204ENST00000554178 IL1RAPL2Q9NP60 686 aa11.78□□□□□ -0.52
PTPN21-204ENST00000554178 FBXO28Q9NVF7 368 aa11.78□□□□□ -0.52
PTPN21-204ENST00000554178 CHD9Q3L8U1 2897 aa11.78□□□□□ -0.52
PTPN21-204ENST00000554178 IPO8O15397 1037 aaKnown RBP11.77□□□□□ -0.53
PTPN21-204ENST00000554178 RAG1P15918 1043 aa11.77□□□□□ -0.53
PTPN21-204ENST00000554178 PDE6AP16499 860 aa11.77□□□□□ -0.53
PTPN21-204ENST00000554178 DNAJB2P25686 324 aa11.77□□□□□ -0.53
PTPN21-204ENST00000554178 ICA1Q05084 483 aa11.77□□□□□ -0.53
PTPN21-204ENST00000554178 GABPAQ06546 454 aa11.77□□□□□ -0.53
PTPN21-204ENST00000554178 MAP3K12Q12852 859 aa11.77□□□□□ -0.53
PTPN21-204ENST00000554178 MARVELD3Q96A59 401 aa11.77□□□□□ -0.53
PTPN21-204ENST00000554178 ZNF512BQ96KM6 892 aaPredicted RBP11.77□□□□□ -0.53
PTPN21-204ENST00000554178 DNAJC2Q99543 621 aaKnown RBP11.77□□□□□ -0.53
PTPN21-204ENST00000554178 MUC3AQ02505 3323 aa11.76□□□□□ -0.53
PTPN21-204ENST00000554178 COL4A4P53420 1690 aaPredicted RBP11.76□□□□□ -0.53
PTPN21-204ENST00000554178 RIOK3O14730 519 aaKnown RBP11.76□□□□□ -0.53
PTPN21-204ENST00000554178 PRKAB2O43741 272 aa11.76□□□□□ -0.53
PTPN21-204ENST00000554178 RARBP10826 455 aa11.76□□□□□ -0.53
PTPN21-204ENST00000554178 ATP8B2P98198 1209 aa11.76□□□□□ -0.53
PTPN21-204ENST00000554178 FPGSQ05932 587 aa11.76□□□□□ -0.53
PTPN21-204ENST00000554178 TMEM132BQ14DG7 1078 aa11.76□□□□□ -0.53
PTPN21-204ENST00000554178 SHCBP1Q8NEM2 672 aa11.76□□□□□ -0.53
PTPN21-204ENST00000554178 MMP19Q99542 508 aa11.76□□□□□ -0.53
PTPN21-204ENST00000554178 CRNKL1Q9BZJ0 848 aaKnown RBP11.76□□□□□ -0.53
PTPN21-204ENST00000554178 ARMT1Q9H993 441 aa11.76□□□□□ -0.53
PTPN21-204ENST00000554178 CHD7Q9P2D1 2997 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms