RNA–Protein interactions for RNA: ENST00000554040.5

ATXN3-224, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 592 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-224ENST00000554040 ANKRD23Q86SG2 305 aa8.78□□□□□ -1
ATXN3-224ENST00000554040 DZIP1LQ8IYY4 767 aaKnown RBP8.78□□□□□ -1
ATXN3-224ENST00000554040 ZNF295-AS1Q8N0V1 137 aa8.78□□□□□ -1
ATXN3-224ENST00000554040 PRDM6Q9NQX0 595 aa8.78□□□□□ -1
ATXN3-224ENST00000554040 NDFIP2Q9NV92 336 aa8.78□□□□□ -1
ATXN3-224ENST00000554040 JAG2Q9Y219 1238 aa8.78□□□□□ -1
ATXN3-224ENST00000554040 LAMB1P07942 1786 aa8.78□□□□□ -1
ATXN3-224ENST00000554040 ZNF646O15015 1829 aaPredicted RBP8.77□□□□□ -1
ATXN3-224ENST00000554040 PDHXO00330 501 aa8.77□□□□□ -1.01
ATXN3-224ENST00000554040 CSF1RP07333 972 aa8.77□□□□□ -1.01
ATXN3-224ENST00000554040 ABL2P42684 1182 aa8.77□□□□□ -1.01
ATXN3-224ENST00000554040 TNNI2P48788 182 aa8.77□□□□□ -1.01
ATXN3-224ENST00000554040 FCGRTP55899 365 aa8.77□□□□□ -1.01
ATXN3-224ENST00000554040 TLR1Q15399 786 aa8.77□□□□□ -1.01
ATXN3-224ENST00000554040 ZNF804AQ7Z570 1209 aa8.77□□□□□ -1.01
ATXN3-224ENST00000554040 NECAB2Q7Z6G3 386 aa8.77□□□□□ -1.01
ATXN3-224ENST00000554040 RHBDD1Q8TEB9 315 aa8.77□□□□□ -1.01
ATXN3-224ENST00000554040 ZKSCAN4Q969J2 545 aaPredicted RBP8.77□□□□□ -1.01
ATXN3-224ENST00000554040 PAWRQ96IZ0 340 aaKnown RBP8.77□□□□□ -1.01
ATXN3-224ENST00000554040 DEFB118Q96PH6 123 aa8.77□□□□□ -1.01
ATXN3-224ENST00000554040 PLA2G12BQ9BX93 195 aa8.77□□□□□ -1.01
ATXN3-224ENST00000554040 OXCT2Q9BYC2 517 aaPredicted RBP8.77□□□□□ -1.01
ATXN3-224ENST00000554040 PRM3Q9NNZ6 103 aa8.77□□□□□ -1.01
ATXN3-224ENST00000554040 MAP3K2Q9Y2U5 619 aa8.77□□□□□ -1.01
ATXN3-224ENST00000554040 ADGRA2Q96PE1 1338 aa8.77□□□□□ -1.01
ATXN3-224ENST00000554040 MUC3AQ02505 3323 aa8.76□□□□□ -1.01
ATXN3-224ENST00000554040 PI4KAP2A4QPH2 592 aa8.76□□□□□ -1.01
ATXN3-224ENST00000554040 SHISA8B8ZZ34 492 aa8.76□□□□□ -1.01
ATXN3-224ENST00000554040 C2CD2LO14523 706 aa8.76□□□□□ -1.01
ATXN3-224ENST00000554040 ADCY3O60266 1144 aa8.76□□□□□ -1.01
ATXN3-224ENST00000554040 TAF5LO75529 589 aa8.76□□□□□ -1.01
ATXN3-224ENST00000554040 INHAP05111 366 aa8.76□□□□□ -1.01
ATXN3-224ENST00000554040 PPATQ06203 517 aa8.76□□□□□ -1.01
ATXN3-224ENST00000554040 LBRQ14739 615 aaKnown RBP8.76□□□□□ -1.01
ATXN3-224ENST00000554040 KSR2Q6VAB6 950 aa8.76□□□□□ -1.01
ATXN3-224ENST00000554040 TDHQ8IZJ6 230 aa8.76□□□□□ -1.01
ATXN3-224ENST00000554040 PI4KAP1Q8N8J0 262 aa8.76□□□□□ -1.01
ATXN3-224ENST00000554040 WRNIP1Q96S55 665 aa8.76□□□□□ -1.01
ATXN3-224ENST00000554040 PAK6Q9NQU5 681 aaPredicted RBP8.76□□□□□ -1.01
ATXN3-224ENST00000554040 DNAAF2Q9NVR5 837 aaKnown RBP8.76□□□□□ -1.01
ATXN3-224ENST00000554040 HCN2Q9UL51 889 aa8.76□□□□□ -1.01
ATXN3-224ENST00000554040 ZMYND8Q9ULU4 1186 aaPredicted RBP8.76□□□□□ -1.01
ATXN3-224ENST00000554040 GABRQQ9UN88 632 aa8.76□□□□□ -1.01
ATXN3-224ENST00000554040 TTF2Q9UNY4 1162 aaKnown RBP8.76□□□□□ -1.01
ATXN3-224ENST00000554040 FAM205AQ6ZU69 1335 aa8.76□□□□□ -1.01
ATXN3-224ENST00000554040 ELL2O00472 640 aaPredicted RBP8.75□□□□□ -1.01
ATXN3-224ENST00000554040 MAGEA10P43363 369 aaPredicted RBP8.75□□□□□ -1.01
ATXN3-224ENST00000554040 MAP2K3P46734 347 aa8.75□□□□□ -1.01
ATXN3-224ENST00000554040 FLT3LGP49771 235 aa8.75□□□□□ -1.01
ATXN3-224ENST00000554040 GDF10P55107 478 aa8.75□□□□□ -1.01
ATXN3-224ENST00000554040 MFSD14BQ5SR56 506 aa8.75□□□□□ -1.01
ATXN3-224ENST00000554040 C7orf61Q8IZ16 206 aa8.75□□□□□ -1.01
ATXN3-224ENST00000554040 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.75□□□□□ -1.01
ATXN3-224ENST00000554040 PLPP7Q8NBV4 271 aa8.75□□□□□ -1.01
ATXN3-224ENST00000554040 CRISPLD1Q9H336 500 aa8.75□□□□□ -1.01
ATXN3-224ENST00000554040 KCNH4Q9UQ05 1017 aa8.75□□□□□ -1.01
ATXN3-224ENST00000554040 RPTORQ8N122 1335 aa8.75□□□□□ -1.01
ATXN3-224ENST00000554040 ANKRD18BA2A2Z9 1011 aa8.74□□□□□ -1.01
ATXN3-224ENST00000554040 NEURL1BA8MQ27 555 aa8.74□□□□□ -1.01
ATXN3-224ENST00000554040 PIK3CDO00329 1044 aa8.74□□□□□ -1.01
ATXN3-224ENST00000554040 ZNF853P0CG23 659 aa8.74□□□□□ -1.01
ATXN3-224ENST00000554040 ELNP15502 786 aa8.74□□□□□ -1.01
ATXN3-224ENST00000554040 ATP4AP20648 1035 aa8.74□□□□□ -1.01
ATXN3-224ENST00000554040 CRKP46108 304 aa8.74□□□□□ -1.01
ATXN3-224ENST00000554040 SNRPNP63162 240 aaKnown RBP8.74□□□□□ -1.01
ATXN3-224ENST00000554040 NEXNQ0ZGT2 675 aa8.74□□□□□ -1.01
ATXN3-224ENST00000554040 MOGSQ13724 837 aa8.74□□□□□ -1.01
ATXN3-224ENST00000554040 CWF19L2Q2TBE0 894 aaKnown RBP8.74□□□□□ -1.01
ATXN3-224ENST00000554040 CCDC30Q5VVM6 783 aa8.74□□□□□ -1.01
ATXN3-224ENST00000554040 FAM109BQ6ICB4 259 aaPredicted RBP8.74□□□□□ -1.01
ATXN3-224ENST00000554040 UBE3BQ7Z3V4 1068 aa8.74□□□□□ -1.01
ATXN3-224ENST00000554040 NEDD1Q8NHV4 660 aa8.74□□□□□ -1.01
ATXN3-224ENST00000554040 CCER1Q8TC90 406 aaPredicted RBP8.74□□□□□ -1.01
ATXN3-224ENST00000554040 DIS3LQ8TF46 1054 aaKnown RBP8.74□□□□□ -1.01
ATXN3-224ENST00000554040 HOOK2Q96ED9 719 aa8.74□□□□□ -1.01
ATXN3-224ENST00000554040 GUCD1Q96NT3 240 aa8.74□□□□□ -1.01
ATXN3-224ENST00000554040 PARK7Q99497 189 aaKnown RBP8.74□□□□□ -1.01
ATXN3-224ENST00000554040 CHMP4AQ9BY43 222 aa8.74□□□□□ -1.01
ATXN3-224ENST00000554040 UBE2OQ9C0C9 1292 aaKnown RBP8.74□□□□□ -1.01
ATXN3-224ENST00000554040 PRUNE2Q8WUY3 3088 aa8.74□□□□□ -1.01
ATXN3-224ENST00000554040 LAMA2P24043 3122 aaKnown RBP8.73□□□□□ -1.01
ATXN3-224ENST00000554040 TMEM229AB2RXF0 380 aa8.73□□□□□ -1.01
ATXN3-224ENST00000554040 BNIP3LO60238 219 aa8.73□□□□□ -1.01
ATXN3-224ENST00000554040 IGHA1P01876 353 aa8.73□□□□□ -1.01
ATXN3-224ENST00000554040 HOXB4P17483 251 aaPredicted RBP8.73□□□□□ -1.01
ATXN3-224ENST00000554040 SYN1P17600 705 aa8.73□□□□□ -1.01
ATXN3-224ENST00000554040 CASP7P55210 303 aa8.73□□□□□ -1.01
ATXN3-224ENST00000554040 FOXK2Q01167 660 aa8.73□□□□□ -1.01
ATXN3-224ENST00000554040 MAP7D1Q3KQU3 841 aa8.73□□□□□ -1.01
ATXN3-224ENST00000554040 PLA2G4EQ3MJ16 856 aa8.73□□□□□ -1.01
ATXN3-224ENST00000554040 FKBP1CQ5VVH2 108 aa8.73□□□□□ -1.01
ATXN3-224ENST00000554040 DCAF15Q66K64 600 aa8.73□□□□□ -1.01
ATXN3-224ENST00000554040 FAM83AQ86UY5 434 aa8.73□□□□□ -1.01
ATXN3-224ENST00000554040 CCDC146Q8IYE0 955 aa8.73□□□□□ -1.01
ATXN3-224ENST00000554040 BEND7Q8N7W2 519 aaPredicted RBP8.73□□□□□ -1.01
ATXN3-224ENST00000554040 TDRD7Q8NHU6 1098 aaKnown RBP8.73□□□□□ -1.01
ATXN3-224ENST00000554040 ABHD17AQ96GS6 310 aa8.73□□□□□ -1.01
ATXN3-224ENST00000554040 ZNF341Q9BYN7 854 aa8.73□□□□□ -1.01
ATXN3-224ENST00000554040 USP3Q9Y6I4 520 aa8.73□□□□□ -1.01
ATXN3-224ENST00000554040 ZSWIM8A7E2V4 1837 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms