RNA–Protein interactions for RNA: ENST00000553998.5

ABCD4-220, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 478 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-220ENST00000553998 FPGT-TNNI3KV9GXZ4 949 aa9.35□□□□□ -0.91
ABCD4-220ENST00000553998 ROBO3Q96MS0 1386 aa9.35□□□□□ -0.91
ABCD4-220ENST00000553998 RLFQ13129 1914 aa9.35□□□□□ -0.91
ABCD4-220ENST00000553998 CHD9Q3L8U1 2897 aa9.34□□□□□ -0.91
ABCD4-220ENST00000553998 A0A1W2PQ45 241 aaPredicted RBP9.34□□□□□ -0.91
ABCD4-220ENST00000553998 A0A1W2PQY0 241 aa9.34□□□□□ -0.91
ABCD4-220ENST00000553998 ADAMTS4O75173 837 aa9.34□□□□□ -0.91
ABCD4-220ENST00000553998 TIMP1P01033 207 aa9.34□□□□□ -0.91
ABCD4-220ENST00000553998 ZNF865P0CJ78 1059 aaPredicted RBP9.34□□□□□ -0.91
ABCD4-220ENST00000553998 RARBP10826 455 aa9.34□□□□□ -0.91
ABCD4-220ENST00000553998 PLA2G5P39877 138 aa9.34□□□□□ -0.91
ABCD4-220ENST00000553998 PLCD1P51178 756 aa9.34□□□□□ -0.91
ABCD4-220ENST00000553998 SEPT2Q15019 361 aa9.34□□□□□ -0.91
ABCD4-220ENST00000553998 CCSAPQ6IQ19 270 aaPredicted RBP9.34□□□□□ -0.91
ABCD4-220ENST00000553998 C16orf59Q7L2K0 433 aa9.34□□□□□ -0.91
ABCD4-220ENST00000553998 SIAH1Q8IUQ4 282 aa9.34□□□□□ -0.91
ABCD4-220ENST00000553998 TIFAQ96CG3 184 aa9.34□□□□□ -0.91
ABCD4-220ENST00000553998 XPNPEP3Q9NQH7 507 aa9.34□□□□□ -0.91
ABCD4-220ENST00000553998 TMEM39AQ9NV64 488 aa9.34□□□□□ -0.91
ABCD4-220ENST00000553998 EXOC6BQ9Y2D4 811 aa9.34□□□□□ -0.91
ABCD4-220ENST00000553998 BDP1A6H8Y1 2624 aa9.34□□□□□ -0.91
ABCD4-220ENST00000553998 ZNF236Q9UL36 1845 aa9.33□□□□□ -0.92
ABCD4-220ENST00000553998 SLC25A27O95847 323 aa9.33□□□□□ -0.92
ABCD4-220ENST00000553998 FCER1AP12319 257 aa9.33□□□□□ -0.92
ABCD4-220ENST00000553998 USP5P45974 858 aa9.33□□□□□ -0.92
ABCD4-220ENST00000553998 ZNF792Q3KQV3 632 aa9.33□□□□□ -0.92
ABCD4-220ENST00000553998 KIAA1755Q5JYT7 1200 aa9.33□□□□□ -0.92
ABCD4-220ENST00000553998 MFSD5Q6N075 450 aa9.33□□□□□ -0.92
ABCD4-220ENST00000553998 SLC44A5Q8NCS7 719 aa9.33□□□□□ -0.92
ABCD4-220ENST00000553998 KLHDC9Q8NEP7 349 aa9.33□□□□□ -0.92
ABCD4-220ENST00000553998 RHPN1Q8TCX5 695 aa9.33□□□□□ -0.92
ABCD4-220ENST00000553998 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.33□□□□□ -0.924e-7■□□□□ 11.2
ABCD4-220ENST00000553998 RIOK1Q9BRS2 568 aaKnown RBP9.33□□□□□ -0.92
ABCD4-220ENST00000553998 TINF2Q9BSI4 451 aa9.33□□□□□ -0.92
ABCD4-220ENST00000553998 TBX21Q9UL17 535 aa9.33□□□□□ -0.92
ABCD4-220ENST00000553998 ARIH1Q9Y4X5 557 aaPredicted RBP9.33□□□□□ -0.92
ABCD4-220ENST00000553998 FRMPD3Q5JV73 1810 aa9.33□□□□□ -0.92
ABCD4-220ENST00000553998 MOXD2PA6NHM9 499 aa9.32□□□□□ -0.92
ABCD4-220ENST00000553998 DCDC2CA8MYV0 355 aa9.32□□□□□ -0.92
ABCD4-220ENST00000553998 PQBP1O60828 265 aaKnown RBP9.32□□□□□ -0.92
ABCD4-220ENST00000553998 PGK1P00558 417 aa9.32□□□□□ -0.92
ABCD4-220ENST00000553998 AKR1A1P14550 325 aa9.32□□□□□ -0.92
ABCD4-220ENST00000553998 HOXD11P31277 338 aaPredicted RBP9.32□□□□□ -0.92
ABCD4-220ENST00000553998 CDK7P50613 346 aa9.32□□□□□ -0.92
ABCD4-220ENST00000553998 MRPS5P82675 430 aaKnown RBP9.32□□□□□ -0.92
ABCD4-220ENST00000553998 TMEM132BQ14DG7 1078 aa9.32□□□□□ -0.92
ABCD4-220ENST00000553998 TMEM240Q5SV17 173 aa9.32□□□□□ -0.92
ABCD4-220ENST00000553998 NCAPG2Q86XI2 1143 aa9.32□□□□□ -0.92
ABCD4-220ENST00000553998 CLASRPQ8N2M8 674 aaKnown RBP9.32□□□□□ -0.92
ABCD4-220ENST00000553998 MSL3Q8N5Y2 521 aaKnown RBP9.32□□□□□ -0.92
ABCD4-220ENST00000553998 MIGA1Q8NAN2 632 aa9.32□□□□□ -0.92
ABCD4-220ENST00000553998 NUP133Q8WUM0 1156 aa9.32□□□□□ -0.92
ABCD4-220ENST00000553998 GAS2L1Q99501 681 aaPredicted RBP9.32□□□□□ -0.92
ABCD4-220ENST00000553998 PBX4Q9BYU1 374 aa9.32□□□□□ -0.92
ABCD4-220ENST00000553998 LRRCC1Q9C099 1032 aa9.32□□□□□ -0.92
ABCD4-220ENST00000553998 THEGQ9P2T0 379 aa9.32□□□□□ -0.92
ABCD4-220ENST00000553998 RAPGEFL1Q9UHV5 662 aa9.32□□□□□ -0.92
ABCD4-220ENST00000553998 DBNLQ9UJU6 430 aaKnown RBP9.32□□□□□ -0.92
ABCD4-220ENST00000553998 TMX2Q9Y320 296 aa9.32□□□□□ -0.92
ABCD4-220ENST00000553998 MYH1P12882 1939 aa9.32□□□□□ -0.92
ABCD4-220ENST00000553998 ELP1O95163 1332 aa9.31□□□□□ -0.92
ABCD4-220ENST00000553998 MYCNP04198 464 aaPredicted RBP9.31□□□□□ -0.92
ABCD4-220ENST00000553998 TAL1P17542 331 aaPredicted RBP9.31□□□□□ -0.92
ABCD4-220ENST00000553998 ACLYP53396 1101 aa9.31□□□□□ -0.92
ABCD4-220ENST00000553998 PPIGQ13427 754 aaKnown RBP eCLIP9.31□□□□□ -0.922e-7■□□□□ 10.7
ABCD4-220ENST00000553998 ADGRE1Q14246 886 aa9.31□□□□□ -0.92
ABCD4-220ENST00000553998 CCDC174Q6PII3 467 aa9.31□□□□□ -0.92
ABCD4-220ENST00000553998 MAMDC4Q6UXC1 1216 aa9.31□□□□□ -0.92
ABCD4-220ENST00000553998 TMEM179Q6ZVK1 233 aa9.31□□□□□ -0.92
ABCD4-220ENST00000553998 RIOX2Q8IUF8 465 aa9.31□□□□□ -0.92
ABCD4-220ENST00000553998 SMC5Q8IY18 1101 aa9.31□□□□□ -0.92
ABCD4-220ENST00000553998 MAGEB6Q8N7X4 407 aa9.31□□□□□ -0.92
ABCD4-220ENST00000553998 ADAMTS19Q8TE59 1207 aa9.31□□□□□ -0.92
ABCD4-220ENST00000553998 ATG4CQ96DT6 458 aa9.31□□□□□ -0.92
ABCD4-220ENST00000553998 FAM122AQ96E09 287 aa9.31□□□□□ -0.92
ABCD4-220ENST00000553998 UHRF1Q96T88 793 aaPredicted RBP9.31□□□□□ -0.92
ABCD4-220ENST00000553998 TANGO6Q9C0B7 1094 aa9.31□□□□□ -0.92
ABCD4-220ENST00000553998 VCPKMTQ9H867 229 aa9.31□□□□□ -0.92
ABCD4-220ENST00000553998 WDR46O15213 610 aaKnown RBP9.3□□□□□ -0.92
ABCD4-220ENST00000553998 IDH1O75874 414 aaKnown RBP9.3□□□□□ -0.92
ABCD4-220ENST00000553998 FLOT1O75955 427 aa9.3□□□□□ -0.92
ABCD4-220ENST00000553998 IGHDP01880 384 aa9.3□□□□□ -0.92
ABCD4-220ENST00000553998 BMP1P13497 986 aa9.3□□□□□ -0.92
ABCD4-220ENST00000553998 CST5P28325 142 aaPredicted RBP9.3□□□□□ -0.92
ABCD4-220ENST00000553998 PBX2P40425 430 aa9.3□□□□□ -0.92
ABCD4-220ENST00000553998 NKX3-2P78367 333 aa9.3□□□□□ -0.92
ABCD4-220ENST00000553998 MAP3K12Q12852 859 aa9.3□□□□□ -0.92
ABCD4-220ENST00000553998 AACSQ86V21 672 aa9.3□□□□□ -0.92
ABCD4-220ENST00000553998 REPS2Q8NFH8 660 aa9.3□□□□□ -0.92
ABCD4-220ENST00000553998 EAF2Q96CJ1 260 aaPredicted RBP9.3□□□□□ -0.92
ABCD4-220ENST00000553998 MMP19Q99542 508 aa9.3□□□□□ -0.92
ABCD4-220ENST00000553998 PRDM12Q9H4Q4 367 aa9.3□□□□□ -0.92
ABCD4-220ENST00000553998 STARD7Q9NQZ5 370 aa9.3□□□□□ -0.92
ABCD4-220ENST00000553998 CXXC1Q9P0U4 656 aaPredicted RBP9.3□□□□□ -0.92
ABCD4-220ENST00000553998 ZBTB47Q9UFB7 747 aaPredicted RBP9.3□□□□□ -0.92
ABCD4-220ENST00000553998 CHD7Q9P2D1 2997 aa9.3□□□□□ -0.92
ABCD4-220ENST00000553998 MROH7Q68CQ1 1323 aa9.3□□□□□ -0.92
ABCD4-220ENST00000553998 SYNGAP1Q96PV0 1343 aa9.3□□□□□ -0.92
ABCD4-220ENST00000553998 GRXCR1A8MXD5 290 aa9.29□□□□□ -0.92
ABCD4-220ENST00000553998 DUSP11O75319 330 aaKnown RBP9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms