RNA–Protein interactions for RNA: ENST00000553938.5

SPTB-206, Transcript of spectrin beta, erythrocytic, humanhuman

TSL 1 (best)

Gene SPTB, Length 3,456 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTB-206ENST00000553938 NT5DC1Q5TFE4 455 aa13.7□□□□□ -0.22
SPTB-206ENST00000553938 TRIM22Q8IYM9 498 aa13.7□□□□□ -0.22
SPTB-206ENST00000553938 SRBD1Q8N5C6 995 aaKnown RBP13.7□□□□□ -0.22
SPTB-206ENST00000553938 UBAC1Q9BSL1 405 aa13.7□□□□□ -0.22
SPTB-206ENST00000553938 ADD3Q9UEY8 706 aaKnown RBP13.7□□□□□ -0.22
SPTB-206ENST00000553938 CICQ96RK0 1608 aaPredicted RBP13.7□□□□□ -0.22
SPTB-206ENST00000553938 WDR19Q8NEZ3 1342 aa13.7□□□□□ -0.22
SPTB-206ENST00000553938 KCNJ6P48051 423 aa13.7□□□□□ -0.22
SPTB-206ENST00000553938 SAFBQ15424 915 aaKnown RBP eCLIP13.7□□□□□ -0.22
SPTB-206ENST00000553938 STAG1Q8WVM7 1258 aa13.7□□□□□ -0.22
SPTB-206ENST00000553938 HPS3Q969F9 1004 aa13.7□□□□□ -0.22
SPTB-206ENST00000553938 PDE11AQ9HCR9 933 aa13.7□□□□□ -0.22
SPTB-206ENST00000553938 AKR1B15C9JRZ8 316 aaPredicted RBP13.69□□□□□ -0.22
SPTB-206ENST00000553938 STX10O60499 249 aa13.69□□□□□ -0.22
SPTB-206ENST00000553938 LONRF2Q1L5Z9 754 aa13.69□□□□□ -0.22
SPTB-206ENST00000553938 FKBP15Q5T1M5 1219 aa13.69□□□□□ -0.22
SPTB-206ENST00000553938 CWC15Q9P013 229 aaKnown RBP13.69□□□□□ -0.22
SPTB-206ENST00000553938 ZNF335Q9H4Z2 1342 aaPredicted RBP13.69□□□□□ -0.22
SPTB-206ENST00000553938 DEXIO95424 95 aa13.69□□□□□ -0.22
SPTB-206ENST00000553938 KRT31Q15323 416 aa13.69□□□□□ -0.22
SPTB-206ENST00000553938 TYW1BQ6NUM6 668 aa13.69□□□□□ -0.22
SPTB-206ENST00000553938 CDHR2Q9BYE9 1310 aa13.69□□□□□ -0.22
SPTB-206ENST00000553938 PES1O00541 588 aaKnown RBP13.69□□□□□ -0.22
SPTB-206ENST00000553938 VSNL1P62760 191 aa13.69□□□□□ -0.22
SPTB-206ENST00000553938 CCDC91Q7Z6B0 441 aa13.69□□□□□ -0.22
SPTB-206ENST00000553938 SPATA20Q8TB22 786 aa13.69□□□□□ -0.22
SPTB-206ENST00000553938 UIMC1Q96RL1 719 aa13.69□□□□□ -0.22
SPTB-206ENST00000553938 TFCP2L1Q9NZI6 479 aa13.69□□□□□ -0.22
SPTB-206ENST00000553938 ZSCAN12O43309 604 aa13.68□□□□□ -0.22
SPTB-206ENST00000553938 SLC5A1P13866 664 aa13.68□□□□□ -0.22
SPTB-206ENST00000553938 RILPL1Q5EBL4 403 aa13.68□□□□□ -0.22
SPTB-206ENST00000553938 NUTM2AQ8IVF1 878 aaPredicted RBP13.68□□□□□ -0.22
SPTB-206ENST00000553938 FOXP1Q9H334 677 aaPredicted RBP13.68□□□□□ -0.22
SPTB-206ENST00000553938 REXO2Q9Y3B8 237 aaKnown RBP13.68□□□□□ -0.22
SPTB-206ENST00000553938 SH3BP1Q9Y3L3 701 aa13.68□□□□□ -0.22
SPTB-206ENST00000553938 DUSP10Q9Y6W6 482 aa13.68□□□□□ -0.22
SPTB-206ENST00000553938 TRIM75PA6NK02 468 aa13.68□□□□□ -0.22
SPTB-206ENST00000553938 NRDCO43847 1150 aa13.68□□□□□ -0.22
SPTB-206ENST00000553938 PBX1P40424 430 aa13.68□□□□□ -0.22
SPTB-206ENST00000553938 RIN2Q8WYP3 895 aaPredicted RBP13.68□□□□□ -0.22
SPTB-206ENST00000553938 USP17L12C9JPN9 530 aa13.67□□□□□ -0.22
SPTB-206ENST00000553938 USP17L21D6R901 530 aa13.67□□□□□ -0.22
SPTB-206ENST00000553938 MFAP3LO75121 409 aa13.67□□□□□ -0.22
SPTB-206ENST00000553938 CHMP4BP1P59074 171 aa13.67□□□□□ -0.22
SPTB-206ENST00000553938 BIRC2Q13490 618 aa13.67□□□□□ -0.22
SPTB-206ENST00000553938 PTF1AQ7RTS3 328 aa13.67□□□□□ -0.22
SPTB-206ENST00000553938 ZNF34Q8IZ26 560 aa13.67□□□□□ -0.22
SPTB-206ENST00000553938 ABCB6Q9NP58 842 aa13.67□□□□□ -0.22
SPTB-206ENST00000553938 AATFQ9NY61 560 aaKnown RBP eCLIP13.67□□□□□ -0.22
SPTB-206ENST00000553938 ZBTB12Q9Y330 459 aaPredicted RBP13.67□□□□□ -0.22
SPTB-206ENST00000553938 MAP2K2P36507 400 aa13.67□□□□□ -0.22
SPTB-206ENST00000553938 PPARDQ03181 441 aa13.67□□□□□ -0.22
SPTB-206ENST00000553938 ITPK1Q13572 414 aa13.67□□□□□ -0.22
SPTB-206ENST00000553938 RRAGBQ5VZM2 374 aa13.67□□□□□ -0.22
SPTB-206ENST00000553938 STAG2Q8N3U4 1231 aa13.67□□□□□ -0.22
SPTB-206ENST00000553938 MLKLQ8NB16 471 aa13.67□□□□□ -0.22
SPTB-206ENST00000553938 CALR3Q96L12 384 aaKnown RBP13.67□□□□□ -0.22
SPTB-206ENST00000553938 PHF20Q9BVI0 1012 aa13.67□□□□□ -0.22
SPTB-206ENST00000553938 UBXN6Q9BZV1 441 aa13.67□□□□□ -0.22
SPTB-206ENST00000553938 ARHGAP25P42331 645 aa13.67□□□□□ -0.22
SPTB-206ENST00000553938 GPS2Q13227 327 aa13.67□□□□□ -0.22
SPTB-206ENST00000553938 TXNRD3Q86VQ6 643 aa13.67□□□□□ -0.22
SPTB-206ENST00000553938 POLD4Q9HCU8 107 aa13.67□□□□□ -0.22
SPTB-206ENST00000553938 SLAIN2Q9P270 581 aa13.67□□□□□ -0.22
SPTB-206ENST00000553938 STK36Q9NRP7 1315 aa13.67□□□□□ -0.22
SPTB-206ENST00000553938 MYH14Q7Z406 1995 aaKnown RBP13.66□□□□□ -0.22
SPTB-206ENST00000553938 ERICH2A1L162 156 aa13.66□□□□□ -0.22
SPTB-206ENST00000553938 TROAPQ12815 778 aa13.66□□□□□ -0.22
SPTB-206ENST00000553938 SLC35G1Q2M3R5 365 aa13.66□□□□□ -0.22
SPTB-206ENST00000553938 CDKAL1Q5VV42 579 aa13.66□□□□□ -0.22
SPTB-206ENST00000553938 INTS5Q6P9B9 1019 aaKnown RBP13.66□□□□□ -0.22
SPTB-206ENST00000553938 CAPZA3Q96KX2 299 aa13.66□□□□□ -0.22
SPTB-206ENST00000553938 GPR101Q96P66 508 aaPredicted RBP13.66□□□□□ -0.22
SPTB-206ENST00000553938 RIOK1Q9BRS2 568 aaKnown RBP13.66□□□□□ -0.22
SPTB-206ENST00000553938 NIP7Q9Y221 180 aaKnown RBP eCLIP13.66□□□□□ -0.22
SPTB-206ENST00000553938 NHSL1Q5SYE7 1610 aa13.66□□□□□ -0.22
SPTB-206ENST00000553938 XIRP1Q702N8 1843 aaKnown RBP13.66□□□□□ -0.22
SPTB-206ENST00000553938 CCDC189A1A4V9 331 aa13.66□□□□□ -0.22
SPTB-206ENST00000553938 RCCD1A6NED2 376 aa13.66□□□□□ -0.22
SPTB-206ENST00000553938 CCDC175P0C221 793 aa13.66□□□□□ -0.22
SPTB-206ENST00000553938 PRDX5P30044 214 aa13.66□□□□□ -0.22
SPTB-206ENST00000553938 MAP2K1Q02750 393 aaPredicted RBP13.66□□□□□ -0.22
SPTB-206ENST00000553938 ALX1Q15699 326 aa13.66□□□□□ -0.22
SPTB-206ENST00000553938 KIF4BQ2VIQ3 1234 aa13.66□□□□□ -0.22
SPTB-206ENST00000553938 KRT23Q9C075 422 aa13.66□□□□□ -0.22
SPTB-206ENST00000553938 RABEP2Q9H5N1 569 aa13.66□□□□□ -0.22
SPTB-206ENST00000553938 GUCA1BQ9UMX6 200 aa13.66□□□□□ -0.22
SPTB-206ENST00000553938 FAM170AA1A519 330 aa13.66□□□□□ -0.22
SPTB-206ENST00000553938 ZNF185O15231 689 aa13.66□□□□□ -0.22
SPTB-206ENST00000553938 KCNQ2O43526 872 aa13.66□□□□□ -0.22
SPTB-206ENST00000553938 IFIT1BQ5T764 474 aaKnown RBP13.66□□□□□ -0.22
SPTB-206ENST00000553938 LRCH2Q5VUJ6 765 aa13.66□□□□□ -0.22
SPTB-206ENST00000553938 SH3RF1Q7Z6J0 888 aa13.66□□□□□ -0.22
SPTB-206ENST00000553938 IRF2BP1Q8IU81 584 aa13.66□□□□□ -0.22
SPTB-206ENST00000553938 SLC44A5Q8NCS7 719 aa13.66□□□□□ -0.22
SPTB-206ENST00000553938 ANKRD20A12PQ8NF67 263 aa13.66□□□□□ -0.22
SPTB-206ENST00000553938 DYNLL2Q96FJ2 89 aa13.66□□□□□ -0.22
SPTB-206ENST00000553938 ZNF512BQ96KM6 892 aaPredicted RBP13.66□□□□□ -0.22
SPTB-206ENST00000553938 ZSCAN10Q96SZ4 725 aaPredicted RBP13.66□□□□□ -0.22
SPTB-206ENST00000553938 SMARCAL1Q9NZC9 954 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms