RNA–Protein interactions for RNA: ENST00000553823.5

NEK9-202, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-202ENST00000553823 PKP1Q13835 747 aa13.64□□□□□ -0.23
NEK9-202ENST00000553823 CCDC96Q2M329 555 aa13.64□□□□□ -0.23
NEK9-202ENST00000553823 GPATCH4Q5T3I0 446 aaKnown RBP13.64□□□□□ -0.23
NEK9-202ENST00000553823 SLFN13Q68D06 897 aa13.64□□□□□ -0.23
NEK9-202ENST00000553823 RASGRP2Q7LDG7 609 aa13.64□□□□□ -0.23
NEK9-202ENST00000553823 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.64□□□□□ -0.23
NEK9-202ENST00000553823 WASF1Q92558 559 aa13.64□□□□□ -0.23
NEK9-202ENST00000553823 ZKSCAN4Q969J2 545 aaPredicted RBP13.64□□□□□ -0.23
NEK9-202ENST00000553823 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.64□□□□□ -0.23
NEK9-202ENST00000553823 PHIPQ8WWQ0 1821 aa13.64□□□□□ -0.23
NEK9-202ENST00000553823 FRMPD2Q68DX3 1309 aaPredicted RBP13.64□□□□□ -0.23
NEK9-202ENST00000553823 WDR33Q9C0J8 1336 aaKnown RBP13.64□□□□□ -0.23
NEK9-202ENST00000553823 OTOFQ9HC10 1997 aa13.63□□□□□ -0.23
NEK9-202ENST00000553823 PAPPA2Q9BXP8 1791 aa13.63□□□□□ -0.23
NEK9-202ENST00000553823 DEXIO95424 95 aa13.63□□□□□ -0.23
NEK9-202ENST00000553823 BRD1O95696 1058 aa13.63□□□□□ -0.23
NEK9-202ENST00000553823 NDUFB10O96000 172 aa13.63□□□□□ -0.23
NEK9-202ENST00000553823 SLC1A4P43007 532 aa13.63□□□□□ -0.23
NEK9-202ENST00000553823 CCDC84Q86UT8 332 aaPredicted RBP13.63□□□□□ -0.23
NEK9-202ENST00000553823 GMCL1Q96IK5 515 aa13.63□□□□□ -0.23
NEK9-202ENST00000553823 ALG1Q9BT22 464 aa13.63□□□□□ -0.23
NEK9-202ENST00000553823 SPZ1Q9BXG8 430 aa13.63□□□□□ -0.23
NEK9-202ENST00000553823 AS3MTQ9HBK9 375 aa13.63□□□□□ -0.23
NEK9-202ENST00000553823 RBM27Q9P2N5 1060 aaKnown RBP13.63□□□□□ -0.23
NEK9-202ENST00000553823 ZDHHC9Q9Y397 364 aa13.63□□□□□ -0.23
NEK9-202ENST00000553823 V9GY48 417 aaPredicted RBP13.63□□□□□ -0.23
NEK9-202ENST00000553823 VPS37CA5D8V6 355 aaPredicted RBP13.62□□□□□ -0.23
NEK9-202ENST00000553823 H3BQV1 296 aa13.62□□□□□ -0.23
NEK9-202ENST00000553823 ATXN8OSP0DMR3 200 aa13.62□□□□□ -0.23
NEK9-202ENST00000553823 PTPRAP18433 802 aa13.62□□□□□ -0.23
NEK9-202ENST00000553823 TTLL12Q14166 644 aaPredicted RBP13.62□□□□□ -0.23
NEK9-202ENST00000553823 MAP3K11Q16584 847 aa13.62□□□□□ -0.23
NEK9-202ENST00000553823 IFFO2Q5TF58 517 aa13.62□□□□□ -0.23
NEK9-202ENST00000553823 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.62□□□□□ -0.23
NEK9-202ENST00000553823 ARMC9Q7Z3E5 817 aa13.62□□□□□ -0.23
NEK9-202ENST00000553823 C8orf76Q96K31 380 aa13.62□□□□□ -0.23
NEK9-202ENST00000553823 FEZ1Q99689 392 aa13.62□□□□□ -0.23
NEK9-202ENST00000553823 WDR18Q9BV38 432 aa13.62□□□□□ -0.23
NEK9-202ENST00000553823 KIAA1683Q9H0B3 1180 aa13.62□□□□□ -0.23
NEK9-202ENST00000553823 VCPKMTQ9H867 229 aa13.62□□□□□ -0.23
NEK9-202ENST00000553823 GPCPD1Q9NPB8 672 aa13.62□□□□□ -0.23
NEK9-202ENST00000553823 ISY1Q9ULR0 285 aaKnown RBP13.62□□□□□ -0.23
NEK9-202ENST00000553823 MTMR6Q9Y217 621 aa13.62□□□□□ -0.23
NEK9-202ENST00000553823 CSADQ9Y600 493 aa13.62□□□□□ -0.23
NEK9-202ENST00000553823 TCHHQ07283 1943 aa13.61□□□□□ -0.23
NEK9-202ENST00000553823 TRAF5O00463 557 aa13.61□□□□□ -0.23
NEK9-202ENST00000553823 CYTH3O43739 400 aa13.61□□□□□ -0.23
NEK9-202ENST00000553823 ZSCAN22P10073 491 aaPredicted RBP13.61□□□□□ -0.23
NEK9-202ENST00000553823 FOSBP53539 338 aa13.61□□□□□ -0.23
NEK9-202ENST00000553823 VGLL4Q14135 290 aa13.61□□□□□ -0.23
NEK9-202ENST00000553823 PKN1Q16512 942 aa13.61□□□□□ -0.23
NEK9-202ENST00000553823 SLC35G1Q2M3R5 365 aa13.61□□□□□ -0.23
NEK9-202ENST00000553823 KCTD1Q719H9 257 aa13.61□□□□□ -0.23
NEK9-202ENST00000553823 ZNF280CQ8ND82 737 aa13.61□□□□□ -0.23
NEK9-202ENST00000553823 RGS22Q8NE09 1264 aa13.61□□□□□ -0.23
NEK9-202ENST00000553823 AIFM3Q96NN9 605 aa13.61□□□□□ -0.23
NEK9-202ENST00000553823 UBA5Q9GZZ9 404 aa13.61□□□□□ -0.23
NEK9-202ENST00000553823 RIOX1Q9H6W3 641 aa13.61□□□□□ -0.23
NEK9-202ENST00000553823 hCG_1642624A0A1W2PR95 340 aa13.6□□□□□ -0.23
NEK9-202ENST00000553823 USP17L10C9JJH3 530 aa13.6□□□□□ -0.23
NEK9-202ENST00000553823 UBE2Q2LH0YL09 131 aa13.6□□□□□ -0.23
NEK9-202ENST00000553823 BMP3P12645 472 aa13.6□□□□□ -0.23
NEK9-202ENST00000553823 USP14P54578 494 aa13.6□□□□□ -0.23
NEK9-202ENST00000553823 SPP2Q13103 211 aa13.6□□□□□ -0.23
NEK9-202ENST00000553823 TRIM29Q14134 588 aa13.6□□□□□ -0.23
NEK9-202ENST00000553823 ZYXQ15942 572 aaKnown RBP13.6□□□□□ -0.23
NEK9-202ENST00000553823 KIAA1755Q5JYT7 1200 aa13.6□□□□□ -0.23
NEK9-202ENST00000553823 FOXD4L5Q5VV16 416 aaPredicted RBP13.6□□□□□ -0.23
NEK9-202ENST00000553823 TTBK2Q6IQ55 1244 aa13.6□□□□□ -0.23
NEK9-202ENST00000553823 ANKRD13AQ8IZ07 590 aa13.6□□□□□ -0.23
NEK9-202ENST00000553823 SPICE1Q8N0Z3 855 aa13.6□□□□□ -0.23
NEK9-202ENST00000553823 FBXO18Q8NFZ0 1043 aa13.6□□□□□ -0.23
NEK9-202ENST00000553823 FOXD4L4Q8WXT5 416 aaPredicted RBP13.6□□□□□ -0.23
NEK9-202ENST00000553823 PIBF1Q8WXW3 757 aa13.6□□□□□ -0.23
NEK9-202ENST00000553823 LPAR1Q92633 364 aa13.6□□□□□ -0.23
NEK9-202ENST00000553823 RRP36Q96EU6 259 aaKnown RBP13.6□□□□□ -0.23
NEK9-202ENST00000553823 TRPM7Q96QT4 1865 aa13.6□□□□□ -0.23
NEK9-202ENST00000553823 NUP88Q99567 741 aaPredicted RBP13.6□□□□□ -0.23
NEK9-202ENST00000553823 CPVLQ9H3G5 476 aa13.6□□□□□ -0.23
NEK9-202ENST00000553823 SNCAIPQ9Y6H5 919 aa13.6□□□□□ -0.23
NEK9-202ENST00000553823 ZHX2Q9Y6X8 837 aa13.6□□□□□ -0.23
NEK9-202ENST00000553823 PTPRFP10586 1907 aa13.59□□□□□ -0.23
NEK9-202ENST00000553823 F13A1P00488 732 aa13.59□□□□□ -0.23
NEK9-202ENST00000553823 SCG2P13521 617 aa13.59□□□□□ -0.23
NEK9-202ENST00000553823 XBP1P17861 261 aa13.59□□□□□ -0.23
NEK9-202ENST00000553823 BACE1P56817 501 aa13.59□□□□□ -0.23
NEK9-202ENST00000553823 GUCY1B3Q02153 619 aa13.59□□□□□ -0.23
NEK9-202ENST00000553823 MTMR2Q13614 643 aa13.59□□□□□ -0.23
NEK9-202ENST00000553823 PFKFB3Q16875 520 aaPredicted RBP13.59□□□□□ -0.23
NEK9-202ENST00000553823 FAM83BQ5T0W9 1011 aa13.59□□□□□ -0.23
NEK9-202ENST00000553823 CHADLQ6NUI6 762 aa13.59□□□□□ -0.23
NEK9-202ENST00000553823 MOB2Q70IA6 237 aa13.59□□□□□ -0.23
NEK9-202ENST00000553823 TNPO1Q92973 898 aaKnown RBP13.59□□□□□ -0.23
NEK9-202ENST00000553823 VAT1LQ9HCJ6 419 aa13.59□□□□□ -0.23
NEK9-202ENST00000553823 SEC63Q9UGP8 760 aaKnown RBP13.59□□□□□ -0.23
NEK9-202ENST00000553823 C19orf81C9J6K1 198 aa13.58□□□□□ -0.24
NEK9-202ENST00000553823 TMEM232C9JQI7 657 aa13.58□□□□□ -0.24
NEK9-202ENST00000553823 SLC16A2P36021 539 aa13.58□□□□□ -0.24
NEK9-202ENST00000553823 FKBP1BP68106 108 aa13.58□□□□□ -0.24
NEK9-202ENST00000553823 FMR1Q06787 632 aaKnown RBP eCLIP13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms