RNA–Protein interactions for RNA: ENST00000553719.5

PSEN1-208, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-208ENST00000553719 ANKRD23Q86SG2 305 aa21.08■□□□□ 0.97
PSEN1-208ENST00000553719 ZNF274Q96GC6 653 aaPredicted RBP21.08■□□□□ 0.97
PSEN1-208ENST00000553719 NUP88Q99567 741 aaPredicted RBP21.08■□□□□ 0.97
PSEN1-208ENST00000553719 MAD2L2Q9UI95 211 aa21.08■□□□□ 0.97
PSEN1-208ENST00000553719 SLC45A1Q9Y2W3 748 aa21.08■□□□□ 0.97
PSEN1-208ENST00000553719 PALM3A6NDB9 673 aaPredicted RBP21.07■□□□□ 0.96
PSEN1-208ENST00000553719 BTBD19C9JJ37 291 aa21.07■□□□□ 0.96
PSEN1-208ENST00000553719 IGF2BP3O00425 579 aaKnown RBP eCLIP21.07■□□□□ 0.96
PSEN1-208ENST00000553719 ST18O60284 1047 aa21.07■□□□□ 0.96
PSEN1-208ENST00000553719 AOC2O75106 756 aa21.07■□□□□ 0.96
PSEN1-208ENST00000553719 CALM1P0DP23 149 aa21.07■□□□□ 0.96
PSEN1-208ENST00000553719 CALM2P0DP24 149 aa21.07■□□□□ 0.96
PSEN1-208ENST00000553719 CALM3P0DP25 149 aa21.07■□□□□ 0.96
PSEN1-208ENST00000553719 BMP3P12645 472 aa21.07■□□□□ 0.96
PSEN1-208ENST00000553719 SLC1A4P43007 532 aa21.07■□□□□ 0.96
PSEN1-208ENST00000553719 TM4SF4P48230 202 aa21.07■□□□□ 0.96
PSEN1-208ENST00000553719 KIF23Q02241 960 aaPredicted RBP21.07■□□□□ 0.96
PSEN1-208ENST00000553719 GADL1Q6ZQY3 521 aa21.07■□□□□ 0.96
PSEN1-208ENST00000553719 MICU3Q86XE3 530 aa21.07■□□□□ 0.96
PSEN1-208ENST00000553719 LARP6Q9BRS8 491 aaKnown RBP21.07■□□□□ 0.96
PSEN1-208ENST00000553719 RPAP3Q9H6T3 665 aaPredicted RBP21.07■□□□□ 0.96
PSEN1-208ENST00000553719 FAM217BQ9NTX9 383 aaPredicted RBP21.07■□□□□ 0.96
PSEN1-208ENST00000553719 GOLGA8BA8MQT2 603 aa21.06■□□□□ 0.96
PSEN1-208ENST00000553719 ZBTB43O43298 467 aa21.06■□□□□ 0.96
PSEN1-208ENST00000553719 PLA2G6O60733 806 aa21.06■□□□□ 0.96
PSEN1-208ENST00000553719 LARGE1O95461 756 aa21.06■□□□□ 0.96
PSEN1-208ENST00000553719 RXRAP19793 462 aa21.06■□□□□ 0.96
PSEN1-208ENST00000553719 INHBEP58166 350 aa21.06■□□□□ 0.96
PSEN1-208ENST00000553719 ASPRV1Q53RT3 343 aa21.06■□□□□ 0.96
PSEN1-208ENST00000553719 GPATCH4Q5T3I0 446 aaKnown RBP21.06■□□□□ 0.96
PSEN1-208ENST00000553719 BTNL9Q6UXG8 535 aa21.06■□□□□ 0.96
PSEN1-208ENST00000553719 CATSPERGQ6ZRH7 1159 aa21.06■□□□□ 0.96
PSEN1-208ENST00000553719 RAB11FIP4Q86YS3 637 aa21.06■□□□□ 0.96
PSEN1-208ENST00000553719 FAM43AQ8N2R8 423 aa21.06■□□□□ 0.96
PSEN1-208ENST00000553719 ZCCHC17Q9NP64 241 aaKnown RBP21.06■□□□□ 0.96
PSEN1-208ENST00000553719 PCNTO95613 3336 aa21.06■□□□□ 0.96
PSEN1-208ENST00000553719 MAP2K2P36507 400 aa21.05■□□□□ 0.96
PSEN1-208ENST00000553719 SREBF2Q12772 1141 aa21.05■□□□□ 0.96
PSEN1-208ENST00000553719 ME3Q16798 604 aa21.05■□□□□ 0.96
PSEN1-208ENST00000553719 SLC35G1Q2M3R5 365 aa21.05■□□□□ 0.96
PSEN1-208ENST00000553719 KCTD1Q719H9 257 aa21.05■□□□□ 0.96
PSEN1-208ENST00000553719 STAG2Q8N3U4 1231 aa21.05■□□□□ 0.96
PSEN1-208ENST00000553719 FANCBQ8NB91 859 aa21.05■□□□□ 0.96
PSEN1-208ENST00000553719 MTMR7Q9Y216 660 aa21.05■□□□□ 0.96
PSEN1-208ENST00000553719 FRMPD2Q68DX3 1309 aaPredicted RBP21.04■□□□□ 0.96
PSEN1-208ENST00000553719 USP17L15C9J2P7 530 aa21.04■□□□□ 0.96
PSEN1-208ENST00000553719 USP17L13C9JLJ4 530 aa21.04■□□□□ 0.96
PSEN1-208ENST00000553719 USP17L11C9JVI0 530 aa21.04■□□□□ 0.96
PSEN1-208ENST00000553719 USP17L18D6R9N7 530 aa21.04■□□□□ 0.96
PSEN1-208ENST00000553719 USP17L22D6RA61 530 aa21.04■□□□□ 0.96
PSEN1-208ENST00000553719 USP17L17D6RBQ6 530 aa21.04■□□□□ 0.96
PSEN1-208ENST00000553719 USP17L19D6RCP7 530 aa21.04■□□□□ 0.96
PSEN1-208ENST00000553719 USP17L20D6RJB6 530 aa21.04■□□□□ 0.96
PSEN1-208ENST00000553719 RAD21O60216 631 aa21.04■□□□□ 0.96
PSEN1-208ENST00000553719 PFKFB2O60825 505 aa21.04■□□□□ 0.96
PSEN1-208ENST00000553719 PARP1P09874 1014 aaKnown RBP21.04■□□□□ 0.96
PSEN1-208ENST00000553719 GOLGA8HP0CJ92 632 aa21.04■□□□□ 0.96
PSEN1-208ENST00000553719 CDC27P30260 824 aa21.04■□□□□ 0.96
PSEN1-208ENST00000553719 USP17L24Q0WX57 530 aa21.04■□□□□ 0.96
PSEN1-208ENST00000553719 ST3GAL1Q11201 340 aa21.04■□□□□ 0.96
PSEN1-208ENST00000553719 GRM1Q13255 1194 aa21.04■□□□□ 0.96
PSEN1-208ENST00000553719 IFNL1Q8IU54 200 aa21.04■□□□□ 0.96
PSEN1-208ENST00000553719 REM2Q8IYK8 340 aaPredicted RBP21.04■□□□□ 0.96
PSEN1-208ENST00000553719 NUP133Q8WUM0 1156 aa21.04■□□□□ 0.96
PSEN1-208ENST00000553719 LIMCH1Q9UPQ0 1083 aa21.04■□□□□ 0.96
PSEN1-208ENST00000553719 GOLGA8AA7E2F4 631 aa21.03■□□□□ 0.96
PSEN1-208ENST00000553719 METAP2P50579 478 aaKnown RBP eCLIP21.03■□□□□ 0.96
PSEN1-208ENST00000553719 CCDC96Q2M329 555 aa21.03■□□□□ 0.96
PSEN1-208ENST00000553719 TTBK2Q6IQ55 1244 aa21.03■□□□□ 0.96
PSEN1-208ENST00000553719 SYNE3Q6ZMZ3 975 aa21.03■□□□□ 0.96
PSEN1-208ENST00000553719 CCDC144CPQ8IYA2 1237 aa21.03■□□□□ 0.96
PSEN1-208ENST00000553719 DNAJC5GQ8N7S2 189 aa21.03■□□□□ 0.96
PSEN1-208ENST00000553719 CTCFLQ8NI51 663 aaPredicted RBP21.03■□□□□ 0.96
PSEN1-208ENST00000553719 SNX21Q969T3 373 aa21.03■□□□□ 0.96
PSEN1-208ENST00000553719 CHMP4CQ96CF2 233 aa21.03■□□□□ 0.96
PSEN1-208ENST00000553719 FBXO28Q9NVF7 368 aa21.03■□□□□ 0.96
PSEN1-208ENST00000553719 FEM1BQ9UK73 627 aa21.03■□□□□ 0.96
PSEN1-208ENST00000553719 MYPNQ86TC9 1320 aa21.03■□□□□ 0.96
PSEN1-208ENST00000553719 TMEM232C9JQI7 657 aa21.02■□□□□ 0.96
PSEN1-208ENST00000553719 PDHXO00330 501 aa21.02■□□□□ 0.96
PSEN1-208ENST00000553719 MCM2P49736 904 aa21.02■□□□□ 0.96
PSEN1-208ENST00000553719 FUT2Q10981 343 aa21.02■□□□□ 0.96
PSEN1-208ENST00000553719 PPP2R5BQ15173 497 aa21.02■□□□□ 0.96
PSEN1-208ENST00000553719 RTN1Q16799 776 aa21.02■□□□□ 0.96
PSEN1-208ENST00000553719 POTEEQ6S8J3 1075 aa21.02■□□□□ 0.96
PSEN1-208ENST00000553719 LBX2Q6XYB7 198 aa21.02■□□□□ 0.96
PSEN1-208ENST00000553719 TMTC3Q6ZXV5 915 aa21.02■□□□□ 0.96
PSEN1-208ENST00000553719 NOL8Q76FK4 1167 aaKnown RBP21.02■□□□□ 0.96
PSEN1-208ENST00000553719 NBPF11Q86T75 865 aa21.02■□□□□ 0.96
PSEN1-208ENST00000553719 TANGO6Q9C0B7 1094 aa21.02■□□□□ 0.96
PSEN1-208ENST00000553719 ASCC2Q9H1I8 757 aaPredicted RBP21.02■□□□□ 0.96
PSEN1-208ENST00000553719 RBM28Q9NW13 759 aaKnown RBP21.02■□□□□ 0.96
PSEN1-208ENST00000553719 PPP1R9AQ9ULJ8 1098 aa21.02■□□□□ 0.96
PSEN1-208ENST00000553719 ADAMTS5Q9UNA0 930 aa21.02■□□□□ 0.96
PSEN1-208ENST00000553719 ADGRA2Q96PE1 1338 aa21.02■□□□□ 0.95
PSEN1-208ENST00000553719 SPDYE16A6NNV3 312 aaPredicted RBP21.01■□□□□ 0.95
PSEN1-208ENST00000553719 CYTH3O43739 400 aa21.01■□□□□ 0.95
PSEN1-208ENST00000553719 PLEKHA8P1O95397 391 aa21.01■□□□□ 0.95
PSEN1-208ENST00000553719 KIF5BP33176 963 aa21.01■□□□□ 0.95
PSEN1-208ENST00000553719 STAT2P52630 851 aa21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms