RNA–Protein interactions for RNA: ENST00000553602.1

TMEM55B-204, humanhuman

TSL 2

Gene TMEM55B, Length 382 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-204ENST00000553602 ZNF804BA4D1E1 1349 aa5.97□□□□□ -1.45
TMEM55B-204ENST00000553602 COL14A1Q05707 1796 aaKnown RBP5.96□□□□□ -1.46
TMEM55B-204ENST00000553602 ROBO1Q9Y6N7 1651 aa5.96□□□□□ -1.46
TMEM55B-204ENST00000553602 A6NJR5 290 aa5.96□□□□□ -1.46
TMEM55B-204ENST00000553602 GSG1L2A8MUP6 293 aa5.96□□□□□ -1.46
TMEM55B-204ENST00000553602 BTBD18B2RXH4 712 aa5.96□□□□□ -1.46
TMEM55B-204ENST00000553602 PPP1R3GB7ZBB8 358 aa5.96□□□□□ -1.46
TMEM55B-204ENST00000553602 IRS4O14654 1257 aaPredicted RBP5.96□□□□□ -1.46
TMEM55B-204ENST00000553602 PRPF3O43395 683 aaKnown RBP5.96□□□□□ -1.46
TMEM55B-204ENST00000553602 KIF5CO60282 957 aa5.96□□□□□ -1.46
TMEM55B-204ENST00000553602 RPS6KA5O75582 802 aa5.96□□□□□ -1.46
TMEM55B-204ENST00000553602 EIF3JO75822 258 aaKnown RBP5.96□□□□□ -1.46
TMEM55B-204ENST00000553602 IDH1O75874 414 aaKnown RBP5.96□□□□□ -1.46
TMEM55B-204ENST00000553602 MBD4O95243 580 aa5.96□□□□□ -1.46
TMEM55B-204ENST00000553602 MYL1P05976 194 aa5.96□□□□□ -1.46
TMEM55B-204ENST00000553602 FGRP09769 529 aa5.96□□□□□ -1.46
TMEM55B-204ENST00000553602 IL6STP40189 918 aaPredicted RBP5.96□□□□□ -1.46
TMEM55B-204ENST00000553602 PHKA1P46020 1223 aa5.96□□□□□ -1.46
TMEM55B-204ENST00000553602 CLK2P49760 499 aaKnown RBP5.96□□□□□ -1.46
TMEM55B-204ENST00000553602 CHMP4BP1P59074 171 aa5.96□□□□□ -1.46
TMEM55B-204ENST00000553602 GNG11P61952 73 aa5.96□□□□□ -1.46
TMEM55B-204ENST00000553602 FUT2Q10981 343 aa5.96□□□□□ -1.46
TMEM55B-204ENST00000553602 DPYDQ12882 1025 aa5.96□□□□□ -1.46
TMEM55B-204ENST00000553602 SF3B2Q13435 895 aaKnown RBP5.96□□□□□ -1.46
TMEM55B-204ENST00000553602 RASGRF1Q13972 1273 aa5.96□□□□□ -1.46
TMEM55B-204ENST00000553602 SEC23AQ15436 765 aa5.96□□□□□ -1.46
TMEM55B-204ENST00000553602 CHRNA2Q15822 529 aa5.96□□□□□ -1.46
TMEM55B-204ENST00000553602 PI16Q6UXB8 463 aa5.96□□□□□ -1.46
TMEM55B-204ENST00000553602 TOGARAM2Q6ZUX3 1019 aa5.96□□□□□ -1.46
TMEM55B-204ENST00000553602 TOM1L2Q6ZVM7 507 aa5.96□□□□□ -1.46
TMEM55B-204ENST00000553602 TMTC1Q8IUR5 882 aa5.96□□□□□ -1.46
TMEM55B-204ENST00000553602 SULF1Q8IWU6 871 aa5.96□□□□□ -1.46
TMEM55B-204ENST00000553602 ZNF34Q8IZ26 560 aa5.96□□□□□ -1.46
TMEM55B-204ENST00000553602 ZNF654Q8IZM8 581 aa5.96□□□□□ -1.46
TMEM55B-204ENST00000553602 SPATA5Q8NB90 893 aa5.96□□□□□ -1.46
TMEM55B-204ENST00000553602 TNFRSF25Q93038 417 aa5.96□□□□□ -1.46
TMEM55B-204ENST00000553602 PHKBQ93100 1093 aa5.96□□□□□ -1.46
TMEM55B-204ENST00000553602 IQCDQ96DY2 449 aa5.96□□□□□ -1.46
TMEM55B-204ENST00000553602 FAM89AQ96GI7 184 aa5.96□□□□□ -1.46
TMEM55B-204ENST00000553602 FAM163AQ96GL9 167 aaPredicted RBP5.96□□□□□ -1.46
TMEM55B-204ENST00000553602 CLIC6Q96NY7 704 aa5.96□□□□□ -1.46
TMEM55B-204ENST00000553602 MED15Q96RN5 788 aa5.96□□□□□ -1.46
TMEM55B-204ENST00000553602 WDR24Q96S15 920 aa5.96□□□□□ -1.46
TMEM55B-204ENST00000553602 PHF20Q9BVI0 1012 aa5.96□□□□□ -1.46
TMEM55B-204ENST00000553602 FUT8Q9BYC5 575 aa5.96□□□□□ -1.46
TMEM55B-204ENST00000553602 GREM2Q9H772 168 aa5.96□□□□□ -1.46
TMEM55B-204ENST00000553602 BRMS1Q9HCU9 246 aa5.96□□□□□ -1.46
TMEM55B-204ENST00000553602 CNNM1Q9NRU3 951 aa5.96□□□□□ -1.46
TMEM55B-204ENST00000553602 PLSCR2Q9NRY7 297 aa5.96□□□□□ -1.46
TMEM55B-204ENST00000553602 ZSWIM5Q9P217 1185 aa5.96□□□□□ -1.46
TMEM55B-204ENST00000553602 LIMA1Q9UHB6 759 aaKnown RBP5.96□□□□□ -1.46
TMEM55B-204ENST00000553602 WWC3Q9ULE0 1092 aa5.96□□□□□ -1.46
TMEM55B-204ENST00000553602 CCDC9Q9Y3X0 531 aaKnown RBP5.96□□□□□ -1.46
TMEM55B-204ENST00000553602 SLIT2O94813 1529 aa5.95□□□□□ -1.46
TMEM55B-204ENST00000553602 A0A1W2PQC6 194 aa5.95□□□□□ -1.46
TMEM55B-204ENST00000553602 CTAGE9A4FU28 777 aa5.95□□□□□ -1.46
TMEM55B-204ENST00000553602 RCCD1A6NED2 376 aa5.95□□□□□ -1.46
TMEM55B-204ENST00000553602 SNPHO15079 494 aa5.95□□□□□ -1.46
TMEM55B-204ENST00000553602 POLR2DO15514 142 aaKnown RBP5.95□□□□□ -1.46
TMEM55B-204ENST00000553602 APPP05067 770 aa5.95□□□□□ -1.46
TMEM55B-204ENST00000553602 CYP19A1P11511 503 aaPredicted RBP5.95□□□□□ -1.46
TMEM55B-204ENST00000553602 COL9A1P20849 921 aa5.95□□□□□ -1.46
TMEM55B-204ENST00000553602 CDK11BP21127 795 aaKnown RBP5.95□□□□□ -1.46
TMEM55B-204ENST00000553602 MCM3P25205 808 aa5.95□□□□□ -1.46
TMEM55B-204ENST00000553602 KRT2P35908 639 aa5.95□□□□□ -1.46
TMEM55B-204ENST00000553602 PPP1R2P41236 205 aa5.95□□□□□ -1.46
TMEM55B-204ENST00000553602 PIP4K2BP78356 416 aa5.95□□□□□ -1.46
TMEM55B-204ENST00000553602 ATP2C1P98194 919 aaPredicted RBP5.95□□□□□ -1.46
TMEM55B-204ENST00000553602 CACNA1SQ13698 1873 aa5.95□□□□□ -1.46
TMEM55B-204ENST00000553602 SMC1AQ14683 1233 aaKnown RBP5.95□□□□□ -1.46
TMEM55B-204ENST00000553602 PARP10Q53GL7 1025 aa5.95□□□□□ -1.46
TMEM55B-204ENST00000553602 ARL6IP4Q66PJ3 421 aaKnown RBP5.95□□□□□ -1.46
TMEM55B-204ENST00000553602 WDR93Q6P2C0 686 aa5.95□□□□□ -1.46
TMEM55B-204ENST00000553602 BRINP3Q76B58 766 aa5.95□□□□□ -1.46
TMEM55B-204ENST00000553602 PPFIBP1Q86W92 1011 aa5.95□□□□□ -1.46
TMEM55B-204ENST00000553602 DNAJC10Q8IXB1 793 aa5.95□□□□□ -1.46
TMEM55B-204ENST00000553602 FANCBQ8NB91 859 aa5.95□□□□□ -1.46
TMEM55B-204ENST00000553602 PROCA1Q8NCQ7 364 aaPredicted RBP5.95□□□□□ -1.46
TMEM55B-204ENST00000553602 EHBP1Q8NDI1 1231 aa5.95□□□□□ -1.46
TMEM55B-204ENST00000553602 ANKRD20A12PQ8NF67 263 aa5.95□□□□□ -1.46
TMEM55B-204ENST00000553602 GOLGA5Q8TBA6 731 aa5.95□□□□□ -1.46
TMEM55B-204ENST00000553602 CCDC12Q8WUD4 166 aaPredicted RBP5.95□□□□□ -1.46
TMEM55B-204ENST00000553602 ESR2Q92731 530 aa5.95□□□□□ -1.46
TMEM55B-204ENST00000553602 DHX58Q96C10 678 aa5.95□□□□□ -1.46
TMEM55B-204ENST00000553602 RPGRIP1Q96KN7 1286 aa5.95□□□□□ -1.46
TMEM55B-204ENST00000553602 CDC5LQ99459 802 aaKnown RBP5.95□□□□□ -1.46
TMEM55B-204ENST00000553602 UBAC1Q9BSL1 405 aa5.95□□□□□ -1.46
TMEM55B-204ENST00000553602 BRIP1Q9BX63 1249 aa5.95□□□□□ -1.46
TMEM55B-204ENST00000553602 PARD6BQ9BYG5 372 aa5.95□□□□□ -1.46
TMEM55B-204ENST00000553602 CSRNP2Q9H175 543 aa5.95□□□□□ -1.46
TMEM55B-204ENST00000553602 ACBD3Q9H3P7 528 aa5.95□□□□□ -1.46
TMEM55B-204ENST00000553602 VIPAS39Q9H9C1 493 aa5.95□□□□□ -1.46
TMEM55B-204ENST00000553602 MAGEF1Q9HAY2 307 aa5.95□□□□□ -1.46
TMEM55B-204ENST00000553602 SENP2Q9HC62 589 aa5.95□□□□□ -1.46
TMEM55B-204ENST00000553602 MED4Q9NPJ6 270 aa5.95□□□□□ -1.46
TMEM55B-204ENST00000553602 RMND1Q9NWS8 449 aa5.95□□□□□ -1.46
TMEM55B-204ENST00000553602 SERTAD1Q9UHV2 236 aa5.95□□□□□ -1.46
TMEM55B-204ENST00000553602 RWDD2AQ9UIY3 292 aa5.95□□□□□ -1.46
TMEM55B-204ENST00000553602 MYH6P13533 1939 aa5.94□□□□□ -1.46
TMEM55B-204ENST00000553602 FOXN1O15353 648 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms