RNA–Protein interactions for RNA: ENST00000553599.5

PSEN1-207, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 591 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-207ENST00000553599 ANKRD23Q86SG2 305 aa22.57■■□□□ 1.2
PSEN1-207ENST00000553599 SPICE1Q8N0Z3 855 aa22.57■■□□□ 1.2
PSEN1-207ENST00000553599 CTCFLQ8NI51 663 aaPredicted RBP22.57■■□□□ 1.2
PSEN1-207ENST00000553599 BRI3BPQ8WY22 251 aa22.57■■□□□ 1.2
PSEN1-207ENST00000553599 LIMCH1Q9UPQ0 1083 aa22.57■■□□□ 1.2
PSEN1-207ENST00000553599 NID2Q14112 1375 aa22.57■■□□□ 1.2
PSEN1-207ENST00000553599 CCDC196A0A1B0GTZ2 297 aa22.56■■□□□ 1.2
PSEN1-207ENST00000553599 USP17L15C9J2P7 530 aa22.56■■□□□ 1.2
PSEN1-207ENST00000553599 USP17L13C9JLJ4 530 aa22.56■■□□□ 1.2
PSEN1-207ENST00000553599 USP17L11C9JVI0 530 aa22.56■■□□□ 1.2
PSEN1-207ENST00000553599 USP17L18D6R9N7 530 aa22.56■■□□□ 1.2
PSEN1-207ENST00000553599 USP17L22D6RA61 530 aa22.56■■□□□ 1.2
PSEN1-207ENST00000553599 USP17L17D6RBQ6 530 aa22.56■■□□□ 1.2
PSEN1-207ENST00000553599 USP17L19D6RCP7 530 aa22.56■■□□□ 1.2
PSEN1-207ENST00000553599 USP17L20D6RJB6 530 aa22.56■■□□□ 1.2
PSEN1-207ENST00000553599 TM4SF4P48230 202 aa22.56■■□□□ 1.2
PSEN1-207ENST00000553599 GNAQP50148 359 aa22.56■■□□□ 1.2
PSEN1-207ENST00000553599 ZNF543Q08ER8 600 aa22.56■■□□□ 1.2
PSEN1-207ENST00000553599 USP17L24Q0WX57 530 aa22.56■■□□□ 1.2
PSEN1-207ENST00000553599 GRM4Q14833 912 aa22.56■■□□□ 1.2
PSEN1-207ENST00000553599 KIAA1755Q5JYT7 1200 aa22.56■■□□□ 1.2
PSEN1-207ENST00000553599 OTUD7BQ6GQQ9 843 aa22.56■■□□□ 1.2
PSEN1-207ENST00000553599 FANCBQ8NB91 859 aa22.56■■□□□ 1.2
PSEN1-207ENST00000553599 ZSCAN31Q96LW9 406 aaPredicted RBP22.56■■□□□ 1.2
PSEN1-207ENST00000553599 GOLGA8BA8MQT2 603 aa22.55■■□□□ 1.2
PSEN1-207ENST00000553599 PDIA3P30101 505 aaKnown RBP22.55■■□□□ 1.2
PSEN1-207ENST00000553599 VEGFBP49765 207 aa22.55■■□□□ 1.2
PSEN1-207ENST00000553599 KIF23Q02241 960 aaPredicted RBP22.55■■□□□ 1.2
PSEN1-207ENST00000553599 CCDC96Q2M329 555 aa22.55■■□□□ 1.2
PSEN1-207ENST00000553599 MICU3Q86XE3 530 aa22.55■■□□□ 1.2
PSEN1-207ENST00000553599 CHURC1Q8WUH1 139 aa22.55■■□□□ 1.2
PSEN1-207ENST00000553599 NUP133Q8WUM0 1156 aa22.55■■□□□ 1.2
PSEN1-207ENST00000553599 CHMP4CQ96CF2 233 aa22.55■■□□□ 1.2
PSEN1-207ENST00000553599 LZTS2Q9BRK4 669 aa22.55■■□□□ 1.2
PSEN1-207ENST00000553599 RPAP3Q9H6T3 665 aaPredicted RBP22.55■■□□□ 1.2
PSEN1-207ENST00000553599 RBM28Q9NW13 759 aaKnown RBP22.55■■□□□ 1.2
PSEN1-207ENST00000553599 FEM1BQ9UK73 627 aa22.55■■□□□ 1.2
PSEN1-207ENST00000553599 MYPNQ86TC9 1320 aa22.55■■□□□ 1.2
PSEN1-207ENST00000553599 PALM3A6NDB9 673 aaPredicted RBP22.54■■□□□ 1.2
PSEN1-207ENST00000553599 METAP2P50579 478 aaKnown RBP eCLIP22.54■■□□□ 1.2
PSEN1-207ENST00000553599 GRM1Q13255 1194 aa22.54■■□□□ 1.2
PSEN1-207ENST00000553599 FAM83BQ5T0W9 1011 aa22.54■■□□□ 1.2
PSEN1-207ENST00000553599 GPAT2Q6NUI2 795 aa22.54■■□□□ 1.2
PSEN1-207ENST00000553599 CATSPERGQ6ZRH7 1159 aa22.54■■□□□ 1.2
PSEN1-207ENST00000553599 FAM160B2Q86V87 743 aa22.54■■□□□ 1.2
PSEN1-207ENST00000553599 SH2B1Q9NRF2 756 aaPredicted RBP22.54■■□□□ 1.2
PSEN1-207ENST00000553599 PNMA3Q9UL41 463 aa22.54■■□□□ 1.2
PSEN1-207ENST00000553599 TPCN1Q9ULQ1 816 aa22.54■■□□□ 1.2
PSEN1-207ENST00000553599 NAP1L2Q9ULW6 460 aaPredicted RBP22.54■■□□□ 1.2
PSEN1-207ENST00000553599 MTMR7Q9Y216 660 aa22.54■■□□□ 1.2
PSEN1-207ENST00000553599 GOLGA8AA7E2F4 631 aa22.53■■□□□ 1.2
PSEN1-207ENST00000553599 OSBPP22059 807 aa22.53■■□□□ 1.2
PSEN1-207ENST00000553599 SMARCA1P28370 1054 aa22.53■■□□□ 1.2
PSEN1-207ENST00000553599 HTRA3P83110 453 aa22.53■■□□□ 1.2
PSEN1-207ENST00000553599 DGKZQ13574 1117 aa22.53■■□□□ 1.2
PSEN1-207ENST00000553599 TREML2Q5T2D2 321 aa22.53■■□□□ 1.2
PSEN1-207ENST00000553599 BTNL9Q6UXG8 535 aa22.53■■□□□ 1.2
PSEN1-207ENST00000553599 MYL10Q9BUA6 226 aa22.53■■□□□ 1.2
PSEN1-207ENST00000553599 TANGO6Q9C0B7 1094 aa22.53■■□□□ 1.2
PSEN1-207ENST00000553599 MAD2L2Q9UI95 211 aa22.53■■□□□ 1.2
PSEN1-207ENST00000553599 HPS5Q9UPZ3 1129 aa22.53■■□□□ 1.2
PSEN1-207ENST00000553599 THSD7BQ9C0I4 1608 aa22.53■■□□□ 1.2
PSEN1-207ENST00000553599 BTBD19C9JJ37 291 aa22.52■■□□□ 1.2
PSEN1-207ENST00000553599 TMEM232C9JQI7 657 aa22.52■■□□□ 1.2
PSEN1-207ENST00000553599 DHX16O60231 1041 aaKnown RBP22.52■■□□□ 1.2
PSEN1-207ENST00000553599 PFKFB2O60825 505 aa22.52■■□□□ 1.2
PSEN1-207ENST00000553599 ALDH1A1P00352 501 aa22.52■■□□□ 1.2
PSEN1-207ENST00000553599 FDX1P10109 184 aa22.52■■□□□ 1.2
PSEN1-207ENST00000553599 STAT2P52630 851 aa22.52■■□□□ 1.2
PSEN1-207ENST00000553599 COG2Q14746 738 aa22.52■■□□□ 1.2
PSEN1-207ENST00000553599 RTN1Q16799 776 aa22.52■■□□□ 1.2
PSEN1-207ENST00000553599 KCTD1Q719H9 257 aa22.52■■□□□ 1.2
PSEN1-207ENST00000553599 IFNL1Q8IU54 200 aa22.52■■□□□ 1.2
PSEN1-207ENST00000553599 SNX21Q969T3 373 aa22.52■■□□□ 1.2
PSEN1-207ENST00000553599 NUP88Q99567 741 aaPredicted RBP22.52■■□□□ 1.2
PSEN1-207ENST00000553599 PTPN18Q99952 460 aa22.52■■□□□ 1.2
PSEN1-207ENST00000553599 SLKQ9H2G2 1235 aaPredicted RBP22.52■■□□□ 1.2
PSEN1-207ENST00000553599 HOXC10Q9NYD6 342 aa22.52■■□□□ 1.2
PSEN1-207ENST00000553599 PDHXO00330 501 aa22.51■■□□□ 1.19
PSEN1-207ENST00000553599 IRX3P78415 501 aaPredicted RBP22.51■■□□□ 1.19
PSEN1-207ENST00000553599 PRPF38AQ8NAV1 312 aaKnown RBP22.51■■□□□ 1.19
PSEN1-207ENST00000553599 GTF3C2Q8WUA4 911 aaPredicted RBP22.51■■□□□ 1.19
PSEN1-207ENST00000553599 SLF1Q9BQI6 1058 aa22.51■■□□□ 1.19
PSEN1-207ENST00000553599 ISY1Q9ULR0 285 aaKnown RBP22.51■■□□□ 1.19
PSEN1-207ENST00000553599 KLRF2D3W0D1 207 aa22.5■■□□□ 1.19
PSEN1-207ENST00000553599 AOC2O75106 756 aa22.5■■□□□ 1.19
PSEN1-207ENST00000553599 FLOT1O75955 427 aa22.5■■□□□ 1.19
PSEN1-207ENST00000553599 PPP1R9AQ9ULJ8 1098 aa22.5■■□□□ 1.19
PSEN1-207ENST00000553599 FRMPD2Q68DX3 1309 aaPredicted RBP22.5■■□□□ 1.19
PSEN1-207ENST00000553599 IGF2BP3O00425 579 aaKnown RBP eCLIP22.49■■□□□ 1.19
PSEN1-207ENST00000553599 GOLGA8HP0CJ92 632 aa22.49■■□□□ 1.19
PSEN1-207ENST00000553599 RXRAP19793 462 aa22.49■■□□□ 1.19
PSEN1-207ENST00000553599 IKQ13123 557 aaPredicted RBP22.49■■□□□ 1.19
PSEN1-207ENST00000553599 ME3Q16798 604 aa22.49■■□□□ 1.19
PSEN1-207ENST00000553599 CPLX2Q6PUV4 134 aaKnown RBP22.49■■□□□ 1.19
PSEN1-207ENST00000553599 LBX2Q6XYB7 198 aa22.49■■□□□ 1.19
PSEN1-207ENST00000553599 TMTC3Q6ZXV5 915 aa22.49■■□□□ 1.19
PSEN1-207ENST00000553599 NOL8Q76FK4 1167 aaKnown RBP22.49■■□□□ 1.19
PSEN1-207ENST00000553599 RASGRP2Q7LDG7 609 aa22.49■■□□□ 1.19
PSEN1-207ENST00000553599 FAM43AQ8N2R8 423 aa22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms