RNA–Protein interactions for RNA: ENST00000552545.1

AC055716.2-201, humanhuman

BASIC

Gene AC055716.2, Length 2,441 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055716.2-201ENST00000552545 CHADLQ6NUI6 762 aa10.14□□□□□ -0.79
AC055716.2-201ENST00000552545 TRIM22Q8IYM9 498 aa10.14□□□□□ -0.79
AC055716.2-201ENST00000552545 UBA5Q9GZZ9 404 aa10.14□□□□□ -0.79
AC055716.2-201ENST00000552545 ELP3Q9H9T3 547 aa10.14□□□□□ -0.79
AC055716.2-201ENST00000552545 GOPCQ9HD26 462 aa10.14□□□□□ -0.79
AC055716.2-201ENST00000552545 OTOFQ9HC10 1997 aa10.13□□□□□ -0.79
AC055716.2-201ENST00000552545 CELF2O95319 508 aaKnown RBP10.13□□□□□ -0.79
AC055716.2-201ENST00000552545 PPP2R5BQ15173 497 aa10.13□□□□□ -0.79
AC055716.2-201ENST00000552545 NTRK3Q16288 839 aa10.13□□□□□ -0.79
AC055716.2-201ENST00000552545 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.13□□□□□ -0.79
AC055716.2-201ENST00000552545 TMTC3Q6ZXV5 915 aa10.13□□□□□ -0.79
AC055716.2-201ENST00000552545 NBPF11Q86T75 865 aa10.13□□□□□ -0.79
AC055716.2-201ENST00000552545 SRBD1Q8N5C6 995 aaKnown RBP10.13□□□□□ -0.79
AC055716.2-201ENST00000552545 CLMNQ96JQ2 1002 aa10.13□□□□□ -0.79
AC055716.2-201ENST00000552545 SH2D4AQ9H788 454 aa10.13□□□□□ -0.79
AC055716.2-201ENST00000552545 AS3MTQ9HBK9 375 aa10.13□□□□□ -0.79
AC055716.2-201ENST00000552545 TMX2Q9Y320 296 aa10.13□□□□□ -0.79
AC055716.2-201ENST00000552545 V9GY48 417 aaPredicted RBP10.13□□□□□ -0.79
AC055716.2-201ENST00000552545 VPS37CA5D8V6 355 aaPredicted RBP10.13□□□□□ -0.79
AC055716.2-201ENST00000552545 NDUFB10O96000 172 aa10.13□□□□□ -0.79
AC055716.2-201ENST00000552545 IFNAR1P17181 557 aa10.13□□□□□ -0.79
AC055716.2-201ENST00000552545 SLC16A2P36021 539 aa10.13□□□□□ -0.79
AC055716.2-201ENST00000552545 GNAQP50148 359 aa10.13□□□□□ -0.79
AC055716.2-201ENST00000552545 HMGN5P82970 282 aaKnown RBP10.13□□□□□ -0.79
AC055716.2-201ENST00000552545 DGKZQ13574 1117 aa10.13□□□□□ -0.79
AC055716.2-201ENST00000552545 TTBK2Q6IQ55 1244 aa10.13□□□□□ -0.79
AC055716.2-201ENST00000552545 ANKRD13AQ8IZ07 590 aa10.13□□□□□ -0.79
AC055716.2-201ENST00000552545 SMARCC2Q8TAQ2 1214 aa10.13□□□□□ -0.79
AC055716.2-201ENST00000552545 PALM3A6NDB9 673 aaPredicted RBP10.12□□□□□ -0.79
AC055716.2-201ENST00000552545 USP17L10C9JJH3 530 aa10.12□□□□□ -0.79
AC055716.2-201ENST00000552545 FDPSP14324 419 aaKnown RBP10.12□□□□□ -0.79
AC055716.2-201ENST00000552545 GUCY1B3Q02153 619 aa10.12□□□□□ -0.79
AC055716.2-201ENST00000552545 MTMR2Q13614 643 aa10.12□□□□□ -0.79
AC055716.2-201ENST00000552545 PKP1Q13835 747 aa10.12□□□□□ -0.79
AC055716.2-201ENST00000552545 ASPRV1Q53RT3 343 aa10.12□□□□□ -0.79
AC055716.2-201ENST00000552545 HOMER1Q86YM7 354 aa10.12□□□□□ -0.79
AC055716.2-201ENST00000552545 AIFM3Q96NN9 605 aa10.12□□□□□ -0.79
AC055716.2-201ENST00000552545 MAP3K14Q99558 947 aa10.12□□□□□ -0.79
AC055716.2-201ENST00000552545 GINM1Q9NU53 330 aa10.12□□□□□ -0.79
AC055716.2-201ENST00000552545 BCCIPQ9P287 314 aaKnown RBP eCLIP10.12□□□□□ -0.79
AC055716.2-201ENST00000552545 KIF3AQ9Y496 699 aa10.12□□□□□ -0.79
AC055716.2-201ENST00000552545 SNCAIPQ9Y6H5 919 aa10.12□□□□□ -0.79
AC055716.2-201ENST00000552545 NID2Q14112 1375 aa10.12□□□□□ -0.79
AC055716.2-201ENST00000552545 TMEM232C9JQI7 657 aa10.12□□□□□ -0.79
AC055716.2-201ENST00000552545 H3BQV1 296 aa10.12□□□□□ -0.79
AC055716.2-201ENST00000552545 FMNL1O95466 1100 aaPredicted RBP10.12□□□□□ -0.79
AC055716.2-201ENST00000552545 SYT1P21579 422 aa10.12□□□□□ -0.79
AC055716.2-201ENST00000552545 ZNF543Q08ER8 600 aa10.12□□□□□ -0.79
AC055716.2-201ENST00000552545 KIAA1755Q5JYT7 1200 aa10.12□□□□□ -0.79
AC055716.2-201ENST00000552545 FAM83BQ5T0W9 1011 aa10.12□□□□□ -0.79
AC055716.2-201ENST00000552545 IFFO2Q5TF58 517 aa10.12□□□□□ -0.79
AC055716.2-201ENST00000552545 C2orf69Q8N8R5 385 aa10.12□□□□□ -0.79
AC055716.2-201ENST00000552545 ZNF280CQ8ND82 737 aa10.12□□□□□ -0.79
AC055716.2-201ENST00000552545 GMCL1P1Q8NEA9 526 aa10.12□□□□□ -0.79
AC055716.2-201ENST00000552545 DCAF4Q8WV16 495 aa10.12□□□□□ -0.79
AC055716.2-201ENST00000552545 OTUD5Q96G74 571 aa10.12□□□□□ -0.79
AC055716.2-201ENST00000552545 NAP1L5Q96NT1 182 aaPredicted RBP10.12□□□□□ -0.79
AC055716.2-201ENST00000552545 ALG1Q9BT22 464 aa10.12□□□□□ -0.79
AC055716.2-201ENST00000552545 VCPKMTQ9H867 229 aa10.12□□□□□ -0.79
AC055716.2-201ENST00000552545 GBA2Q9HCG7 927 aaPredicted RBP10.12□□□□□ -0.79
AC055716.2-201ENST00000552545 CHMP5Q9NZZ3 219 aa10.12□□□□□ -0.79
AC055716.2-201ENST00000552545 BMP3P12645 472 aa10.11□□□□□ -0.79
AC055716.2-201ENST00000552545 NOL9Q5SY16 702 aaKnown RBP10.11□□□□□ -0.79
AC055716.2-201ENST00000552545 PHIPQ8WWQ0 1821 aa10.11□□□□□ -0.79
AC055716.2-201ENST00000552545 STX6O43752 255 aa10.11□□□□□ -0.79
AC055716.2-201ENST00000552545 PDCP20941 246 aa10.11□□□□□ -0.79
AC055716.2-201ENST00000552545 YY1P25490 414 aa10.11□□□□□ -0.79
AC055716.2-201ENST00000552545 HMGCS2P54868 508 aa10.11□□□□□ -0.79
AC055716.2-201ENST00000552545 GPATCH4Q5T3I0 446 aaKnown RBP10.11□□□□□ -0.79
AC055716.2-201ENST00000552545 OTUD7BQ6GQQ9 843 aa10.11□□□□□ -0.79
AC055716.2-201ENST00000552545 SLC10A4Q96EP9 437 aa10.11□□□□□ -0.79
AC055716.2-201ENST00000552545 C8orf76Q96K31 380 aa10.11□□□□□ -0.79
AC055716.2-201ENST00000552545 LZTS2Q9BRK4 669 aa10.11□□□□□ -0.79
AC055716.2-201ENST00000552545 GJB4Q9NTQ9 266 aa10.11□□□□□ -0.79
AC055716.2-201ENST00000552545 TRPM7Q96QT4 1865 aa10.1□□□□□ -0.79
AC055716.2-201ENST00000552545 CNTNAP5Q8WYK1 1306 aa10.1□□□□□ -0.79
AC055716.2-201ENST00000552545 PRPF3O43395 683 aaKnown RBP10.1□□□□□ -0.79
AC055716.2-201ENST00000552545 DEXIO95424 95 aa10.1□□□□□ -0.79
AC055716.2-201ENST00000552545 ITGBL1O95965 494 aaPredicted RBP10.1□□□□□ -0.79
AC055716.2-201ENST00000552545 SNHG28P0DPA3 235 aa10.1□□□□□ -0.79
AC055716.2-201ENST00000552545 USP14P54578 494 aa10.1□□□□□ -0.79
AC055716.2-201ENST00000552545 BACE1P56817 501 aa10.1□□□□□ -0.79
AC055716.2-201ENST00000552545 TRIM29Q14134 588 aa10.1□□□□□ -0.79
AC055716.2-201ENST00000552545 FOXD4L6Q3SYB3 417 aaPredicted RBP10.1□□□□□ -0.79
AC055716.2-201ENST00000552545 MCTP1Q6DN14 999 aa10.1□□□□□ -0.79
AC055716.2-201ENST00000552545 FOXD4L3Q6VB84 417 aaPredicted RBP10.1□□□□□ -0.79
AC055716.2-201ENST00000552545 ADGRF4Q8IZF3 695 aa10.1□□□□□ -0.79
AC055716.2-201ENST00000552545 WASF1Q92558 559 aa10.1□□□□□ -0.79
AC055716.2-201ENST00000552545 RRP36Q96EU6 259 aaKnown RBP10.1□□□□□ -0.79
AC055716.2-201ENST00000552545 RNF26Q9BY78 433 aaPredicted RBP10.1□□□□□ -0.79
AC055716.2-201ENST00000552545 TANGO6Q9C0B7 1094 aa10.1□□□□□ -0.79
AC055716.2-201ENST00000552545 KIAA1683Q9H0B3 1180 aa10.1□□□□□ -0.79
AC055716.2-201ENST00000552545 SEC63Q9UGP8 760 aaKnown RBP10.1□□□□□ -0.79
AC055716.2-201ENST00000552545 CYTH3O43739 400 aa10.09□□□□□ -0.79
AC055716.2-201ENST00000552545 DDIT3P35638 169 aa10.09□□□□□ -0.79
AC055716.2-201ENST00000552545 SNAP25P60880 206 aa10.09□□□□□ -0.79
AC055716.2-201ENST00000552545 NUCB2P80303 420 aa10.09□□□□□ -0.79
AC055716.2-201ENST00000552545 FUT2Q10981 343 aa10.09□□□□□ -0.79
AC055716.2-201ENST00000552545 MKRN3Q13064 507 aaKnown RBP10.09□□□□□ -0.79
AC055716.2-201ENST00000552545 KIFC2Q96AC6 838 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms