RNA–Protein interactions for RNA: ENST00000552440.5

USP44-208, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 5 BASIC

Gene USP44, Length 1,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-208ENST00000552440 NRDCO43847 1150 aa5.32□□□□□ -1.56
USP44-208ENST00000552440 PAPLNO95428 1278 aa5.32□□□□□ -1.56
USP44-208ENST00000552440 ECEL1O95672 775 aa5.32□□□□□ -1.56
USP44-208ENST00000552440 MYL1P05976 194 aa5.32□□□□□ -1.56
USP44-208ENST00000552440 RLBP1P12271 317 aa5.32□□□□□ -1.56
USP44-208ENST00000552440 ARNTP27540 789 aa5.32□□□□□ -1.56
USP44-208ENST00000552440 PDE6BP35913 854 aa5.32□□□□□ -1.56
USP44-208ENST00000552440 ERVK-24P63145 666 aa5.32□□□□□ -1.56
USP44-208ENST00000552440 PPP2R5AQ15172 486 aa5.32□□□□□ -1.56
USP44-208ENST00000552440 BHLHE22Q8NFJ8 381 aaPredicted RBP5.32□□□□□ -1.56
USP44-208ENST00000552440 FEZ1Q99689 392 aa5.32□□□□□ -1.56
USP44-208ENST00000552440 PAGR1Q9BTK6 254 aa5.32□□□□□ -1.56
USP44-208ENST00000552440 INO80BQ9C086 356 aaPredicted RBP5.32□□□□□ -1.56
USP44-208ENST00000552440 RC3H2Q9HBD1 1191 aaKnown RBP5.32□□□□□ -1.56
USP44-208ENST00000552440 LGR6Q9HBX8 967 aa5.32□□□□□ -1.56
USP44-208ENST00000552440 CHST12Q9NRB3 414 aa5.32□□□□□ -1.56
USP44-208ENST00000552440 IGF2BP3O00425 579 aaKnown RBP eCLIP5.32□□□□□ -1.56
USP44-208ENST00000552440 ANP32CO43423 234 aa5.32□□□□□ -1.56
USP44-208ENST00000552440 EPB41L2O43491 1005 aaKnown RBP5.32□□□□□ -1.56
USP44-208ENST00000552440 GREM1O60565 184 aa5.32□□□□□ -1.56
USP44-208ENST00000552440 FBXO24O75426 580 aa5.32□□□□□ -1.56
USP44-208ENST00000552440 GARTP22102 1010 aa5.32□□□□□ -1.56
USP44-208ENST00000552440 COL9A2Q14055 689 aaPredicted RBP5.32□□□□□ -1.56
USP44-208ENST00000552440 PPP4R4Q6NUP7 873 aa5.32□□□□□ -1.56
USP44-208ENST00000552440 SLC23A3Q6PIS1 610 aa5.32□□□□□ -1.56
USP44-208ENST00000552440 RINLQ6ZS11 566 aa5.32□□□□□ -1.56
USP44-208ENST00000552440 SV2BQ7L1I2 683 aa5.32□□□□□ -1.56
USP44-208ENST00000552440 SPRED2Q7Z698 418 aa5.32□□□□□ -1.56
USP44-208ENST00000552440 KSR1Q8IVT5 923 aa5.32□□□□□ -1.56
USP44-208ENST00000552440 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.32□□□□□ -1.56
USP44-208ENST00000552440 KCT2Q8NC54 265 aa5.32□□□□□ -1.56
USP44-208ENST00000552440 RNF214Q8ND24 703 aa5.32□□□□□ -1.56
USP44-208ENST00000552440 PHC3Q8NDX5 983 aa5.32□□□□□ -1.56
USP44-208ENST00000552440 ASB11Q8WXH4 323 aa5.32□□□□□ -1.56
USP44-208ENST00000552440 CEP44Q9C0F1 390 aa5.32□□□□□ -1.56
USP44-208ENST00000552440 ANAPC4Q9UJX5 808 aa5.32□□□□□ -1.56
USP44-208ENST00000552440 BPNT1O95861 308 aa5.31□□□□□ -1.56
USP44-208ENST00000552440 NME2P22392 152 aa5.31□□□□□ -1.56
USP44-208ENST00000552440 EPHB1P54762 984 aa5.31□□□□□ -1.56
USP44-208ENST00000552440 CDK5R2Q13319 367 aa5.31□□□□□ -1.56
USP44-208ENST00000552440 TTLL4Q14679 1199 aa5.31□□□□□ -1.56
USP44-208ENST00000552440 MAP3K11Q16584 847 aa5.31□□□□□ -1.56
USP44-208ENST00000552440 AOC3Q16853 763 aa5.31□□□□□ -1.56
USP44-208ENST00000552440 EFCAB2Q5VUJ9 269 aa5.31□□□□□ -1.56
USP44-208ENST00000552440 KRT26Q7Z3Y9 468 aa5.31□□□□□ -1.56
USP44-208ENST00000552440 JAMLQ86YT9 394 aa5.31□□□□□ -1.56
USP44-208ENST00000552440 LILRB2Q8N423 598 aa5.31□□□□□ -1.56
USP44-208ENST00000552440 DUSP23Q9BVJ7 150 aa5.31□□□□□ -1.56
USP44-208ENST00000552440 ZNF700Q9H0M5 742 aa5.31□□□□□ -1.56
USP44-208ENST00000552440 TMEM260Q9NX78 707 aa5.31□□□□□ -1.56
USP44-208ENST00000552440 TLR6Q9Y2C9 796 aa5.31□□□□□ -1.56
USP44-208ENST00000552440 AKAP2Q9Y2D5 859 aa5.31□□□□□ -1.56
USP44-208ENST00000552440 ATP8A1Q9Y2Q0 1164 aa5.31□□□□□ -1.56
USP44-208ENST00000552440 SUPT16HQ9Y5B9 1047 aaKnown RBP5.31□□□□□ -1.56
USP44-208ENST00000552440 ARID1BQ8NFD5 2236 aaPredicted RBP5.3□□□□□ -1.56
USP44-208ENST00000552440 CCDC85CA6NKD9 419 aa5.3□□□□□ -1.56
USP44-208ENST00000552440 DBX1A6NMT0 343 aa5.3□□□□□ -1.56
USP44-208ENST00000552440 ZNF862O60290 1169 aa5.3□□□□□ -1.56
USP44-208ENST00000552440 ALDH1L1O75891 902 aa5.3□□□□□ -1.56
USP44-208ENST00000552440 CEACAM5P06731 702 aa5.3□□□□□ -1.56
USP44-208ENST00000552440 COPB2P35606 906 aa5.3□□□□□ -1.56
USP44-208ENST00000552440 FAM160A1Q05DH4 1040 aa5.3□□□□□ -1.56
USP44-208ENST00000552440 RAPGEF1Q13905 1077 aa5.3□□□□□ -1.56
USP44-208ENST00000552440 MAPRE1Q15691 268 aaKnown RBP5.3□□□□□ -1.56
USP44-208ENST00000552440 C16orf86Q6ZW13 317 aa5.3□□□□□ -1.56
USP44-208ENST00000552440 SULF2Q8IWU5 870 aa5.3□□□□□ -1.56
USP44-208ENST00000552440 PLD6Q8N2A8 252 aaKnown RBP5.3□□□□□ -1.56
USP44-208ENST00000552440 HNRNPLLQ8WVV9 542 aaKnown RBP5.3□□□□□ -1.56
USP44-208ENST00000552440 FAM168AQ92567 244 aa5.3□□□□□ -1.56
USP44-208ENST00000552440 UBP1Q9NZI7 540 aa5.3□□□□□ -1.56
USP44-208ENST00000552440 PCDHGC5Q9Y5F6 944 aa5.3□□□□□ -1.56
USP44-208ENST00000552440 PF4P02776 101 aa5.3□□□□□ -1.56
USP44-208ENST00000552440 PTMAP06454 111 aaKnown RBP5.3□□□□□ -1.56
USP44-208ENST00000552440 CELA3AP09093 270 aa5.3□□□□□ -1.56
USP44-208ENST00000552440 CD8BP10966 210 aa5.3□□□□□ -1.56
USP44-208ENST00000552440 COL6A1P12109 1028 aa5.3□□□□□ -1.56
USP44-208ENST00000552440 LIG3P49916 1009 aa5.3□□□□□ -1.56
USP44-208ENST00000552440 POU5F1Q01860 360 aaKnown RBP5.3□□□□□ -1.56
USP44-208ENST00000552440 BNIP3Q12983 259 aa5.3□□□□□ -1.56
USP44-208ENST00000552440 HLTFQ14527 1009 aaKnown RBP eCLIP5.3□□□□□ -1.56
USP44-208ENST00000552440 LRRC14Q15048 493 aa5.3□□□□□ -1.56
USP44-208ENST00000552440 TTF1Q15361 905 aaPredicted RBP5.3□□□□□ -1.56
USP44-208ENST00000552440 KRTAP19-4Q3LI73 84 aa5.3□□□□□ -1.56
USP44-208ENST00000552440 ZC3H12AQ5D1E8 599 aaKnown RBP5.3□□□□□ -1.56
USP44-208ENST00000552440 PCNX4Q63HM2 1172 aa5.3□□□□□ -1.56
USP44-208ENST00000552440 SDR16C5Q8N3Y7 309 aa5.3□□□□□ -1.56
USP44-208ENST00000552440 PAF1Q8N7H5 531 aa5.3□□□□□ -1.56
USP44-208ENST00000552440 ZC3H12CQ9C0D7 883 aaKnown RBP5.3□□□□□ -1.56
USP44-208ENST00000552440 PRKAG3Q9UGI9 489 aa5.3□□□□□ -1.56
USP44-208ENST00000552440 NPHP1O15259 732 aa5.29□□□□□ -1.56
USP44-208ENST00000552440 CRKP46108 304 aa5.29□□□□□ -1.56
USP44-208ENST00000552440 ZNF157P51786 506 aaPredicted RBP5.29□□□□□ -1.56
USP44-208ENST00000552440 OXCT1P55809 520 aa5.29□□□□□ -1.56
USP44-208ENST00000552440 FAAP100Q0VG06 881 aa5.29□□□□□ -1.56
USP44-208ENST00000552440 CAMK2GQ13555 558 aaPredicted RBP5.29□□□□□ -1.56
USP44-208ENST00000552440 TKFCQ3LXA3 575 aa5.29□□□□□ -1.56
USP44-208ENST00000552440 C10orf62Q5T681 223 aaPredicted RBP5.29□□□□□ -1.56
USP44-208ENST00000552440 TPTE2Q6XPS3 522 aa5.29□□□□□ -1.56
USP44-208ENST00000552440 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.29□□□□□ -1.56
USP44-208ENST00000552440 ZNF574Q6ZN55 896 aaPredicted RBP5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms