RNA–Protein interactions for RNA: ENST00000552433.1

LETMD1-233, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 727 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-233ENST00000552433 RBM47A0AV96 593 aaKnown RBP8.56□□□□□ -1.04
LETMD1-233ENST00000552433 KRT1P04264 644 aa8.56□□□□□ -1.04
LETMD1-233ENST00000552433 CLCQ05315 142 aa8.56□□□□□ -1.04
LETMD1-233ENST00000552433 MLECQ14165 292 aa8.56□□□□□ -1.04
LETMD1-233ENST00000552433 MRPL58Q14197 206 aaKnown RBP8.56□□□□□ -1.04
LETMD1-233ENST00000552433 SEZ6Q53EL9 994 aa8.56□□□□□ -1.04
LETMD1-233ENST00000552433 GK5Q6ZS86 529 aa8.56□□□□□ -1.04
LETMD1-233ENST00000552433 PDZD8Q8NEN9 1154 aa8.56□□□□□ -1.04
LETMD1-233ENST00000552433 BHLHE22Q8NFJ8 381 aaPredicted RBP8.56□□□□□ -1.04
LETMD1-233ENST00000552433 KCNQ5Q9NR82 932 aa8.56□□□□□ -1.04
LETMD1-233ENST00000552433 ROBO2Q9HCK4 1378 aa8.56□□□□□ -1.04
LETMD1-233ENST00000552433 CFPP27918 469 aa8.55□□□□□ -1.04
LETMD1-233ENST00000552433 MCM4P33991 863 aa8.55□□□□□ -1.04
LETMD1-233ENST00000552433 TEKQ02763 1124 aa8.55□□□□□ -1.04
LETMD1-233ENST00000552433 HS2ST1Q7LGA3 356 aa8.55□□□□□ -1.04
LETMD1-233ENST00000552433 CILP2Q8IUL8 1156 aa8.55□□□□□ -1.04
LETMD1-233ENST00000552433 SYTL4Q96C24 671 aaPredicted RBP8.55□□□□□ -1.04
LETMD1-233ENST00000552433 PPP1R16BQ96T49 567 aa8.55□□□□□ -1.04
LETMD1-233ENST00000552433 EPB41L4BQ9H329 900 aa8.55□□□□□ -1.04
LETMD1-233ENST00000552433 TSPAN15O95858 294 aa8.54□□□□□ -1.04
LETMD1-233ENST00000552433 GALK1P51570 392 aa8.54□□□□□ -1.04
LETMD1-233ENST00000552433 OVOS1Q6IE37 1185 aa8.54□□□□□ -1.04
LETMD1-233ENST00000552433 ANKLE2Q86XL3 938 aa8.54□□□□□ -1.04
LETMD1-233ENST00000552433 OXR1Q8N573 874 aa8.54□□□□□ -1.04
LETMD1-233ENST00000552433 USHBP1Q8N6Y0 703 aa8.54□□□□□ -1.04
LETMD1-233ENST00000552433 LRRC3Q9BY71 257 aa8.54□□□□□ -1.04
LETMD1-233ENST00000552433 ASCC2Q9H1I8 757 aaPredicted RBP8.54□□□□□ -1.04
LETMD1-233ENST00000552433 ANTXR1Q9H6X2 564 aa8.54□□□□□ -1.04
LETMD1-233ENST00000552433 GMIPQ9P107 970 aa8.54□□□□□ -1.04
LETMD1-233ENST00000552433 NFIBO00712 420 aa8.53□□□□□ -1.04
LETMD1-233ENST00000552433 ATE1O95260 518 aa8.53□□□□□ -1.04
LETMD1-233ENST00000552433 TMEM253P0C7T8 217 aa8.53□□□□□ -1.04
LETMD1-233ENST00000552433 NMIQ13287 307 aaPredicted RBP8.53□□□□□ -1.04
LETMD1-233ENST00000552433 SNW1Q13573 536 aaKnown RBP8.53□□□□□ -1.04
LETMD1-233ENST00000552433 TMC3Q7Z5M5 1100 aa8.53□□□□□ -1.04
LETMD1-233ENST00000552433 DHX38Q92620 1227 aaKnown RBP8.53□□□□□ -1.04
LETMD1-233ENST00000552433 ATG4CQ96DT6 458 aa8.53□□□□□ -1.04
LETMD1-233ENST00000552433 ZNF512BQ96KM6 892 aaPredicted RBP8.53□□□□□ -1.04
LETMD1-233ENST00000552433 MCCP23508 829 aa8.52□□□□□ -1.05
LETMD1-233ENST00000552433 RPL10P27635 214 aaKnown RBP8.52□□□□□ -1.05
LETMD1-233ENST00000552433 NBPF12Q5TAG4 269 aaPredicted RBP8.52□□□□□ -1.05
LETMD1-233ENST00000552433 SPOCD1Q6ZMY3 1216 aa8.52□□□□□ -1.05
LETMD1-233ENST00000552433 TMEM87AQ8NBN3 555 aa8.52□□□□□ -1.05
LETMD1-233ENST00000552433 KCNN1Q92952 543 aa8.52□□□□□ -1.05
LETMD1-233ENST00000552433 EHMT1Q9H9B1 1298 aa8.52□□□□□ -1.05
LETMD1-233ENST00000552433 MINPP1Q9UNW1 487 aa8.52□□□□□ -1.05
LETMD1-233ENST00000552433 FITM1A5D6W6 292 aa8.51□□□□□ -1.05
LETMD1-233ENST00000552433 PSPNO60542 156 aa8.51□□□□□ -1.05
LETMD1-233ENST00000552433 APOBRQ0VD83 1088 aa8.51□□□□□ -1.05
LETMD1-233ENST00000552433 NBPF9Q3BBW0 867 aa8.51□□□□□ -1.05
LETMD1-233ENST00000552433 LDLRAD1Q5T700 205 aa8.51□□□□□ -1.05
LETMD1-233ENST00000552433 SIRT2Q8IXJ6 389 aa8.51□□□□□ -1.05
LETMD1-233ENST00000552433 ANKRD13AQ8IZ07 590 aa8.51□□□□□ -1.05
LETMD1-233ENST00000552433 ZNF526Q8TF50 670 aaPredicted RBP8.51□□□□□ -1.05
LETMD1-233ENST00000552433 TOX2Q96NM4 488 aa8.51□□□□□ -1.05
LETMD1-233ENST00000552433 HDAC8Q9BY41 377 aa8.51□□□□□ -1.05
LETMD1-233ENST00000552433 FOXP3Q9BZS1 431 aa8.51□□□□□ -1.05
LETMD1-233ENST00000552433 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.51□□□□□ -1.05
LETMD1-233ENST00000552433 GPR160Q9UJ42 338 aa8.51□□□□□ -1.05
LETMD1-233ENST00000552433 PLEKHD1A6NEE1 506 aa8.5□□□□□ -1.05
LETMD1-233ENST00000552433 NPIPB6E9PJ23 425 aa8.5□□□□□ -1.05
LETMD1-233ENST00000552433 ETV2O00321 342 aaPredicted RBP8.5□□□□□ -1.05
LETMD1-233ENST00000552433 ANAPC15P60006 121 aa8.5□□□□□ -1.05
LETMD1-233ENST00000552433 RNF4P78317 190 aa8.5□□□□□ -1.05
LETMD1-233ENST00000552433 FBLN7Q53RD9 439 aa8.5□□□□□ -1.05
LETMD1-233ENST00000552433 HSP90AB4PQ58FF6 505 aa8.5□□□□□ -1.05
LETMD1-233ENST00000552433 CDCP2Q5VXM1 449 aa8.5□□□□□ -1.05
LETMD1-233ENST00000552433 ERICH6BQ5W0A0 696 aa8.5□□□□□ -1.05
LETMD1-233ENST00000552433 ATG14Q6ZNE5 492 aa8.5□□□□□ -1.05
LETMD1-233ENST00000552433 SPPL2CQ8IUH8 684 aa8.5□□□□□ -1.05
LETMD1-233ENST00000552433 LRRC56Q8IYG6 542 aaPredicted RBP8.5□□□□□ -1.05
LETMD1-233ENST00000552433 EXOC8Q8IYI6 725 aa8.5□□□□□ -1.05
LETMD1-233ENST00000552433 LILRA2Q8N149 483 aa8.5□□□□□ -1.05
LETMD1-233ENST00000552433 NKD1Q969G9 470 aa8.5□□□□□ -1.05
LETMD1-233ENST00000552433 TCTN2Q96GX1 697 aa8.5□□□□□ -1.05
LETMD1-233ENST00000552433 CNNM2Q9H8M5 875 aa8.5□□□□□ -1.05
LETMD1-233ENST00000552433 CADPSQ9ULU8 1353 aa8.49□□□□□ -1.05
LETMD1-233ENST00000552433 LCE1DQ5T752 114 aa8.49□□□□□ -1.05
LETMD1-233ENST00000552433 ZPBP2Q6X784 338 aa8.49□□□□□ -1.05
LETMD1-233ENST00000552433 NLRC3Q7RTR2 1065 aa8.49□□□□□ -1.05
LETMD1-233ENST00000552433 WAPLQ7Z5K2 1190 aa8.49□□□□□ -1.05
LETMD1-233ENST00000552433 ZNF605Q86T29 641 aa8.49□□□□□ -1.05
LETMD1-233ENST00000552433 C1QL4Q86Z23 238 aa8.49□□□□□ -1.05
LETMD1-233ENST00000552433 ENOX1Q8TC92 643 aaKnown RBP8.49□□□□□ -1.05
LETMD1-233ENST00000552433 SYTL5Q8TDW5 730 aaPredicted RBP8.49□□□□□ -1.05
LETMD1-233ENST00000552433 LINC01599Q8WXQ3 324 aa8.49□□□□□ -1.05
LETMD1-233ENST00000552433 EAF1Q96JC9 268 aaPredicted RBP8.49□□□□□ -1.05
LETMD1-233ENST00000552433 G6PC3Q9BUM1 346 aa8.49□□□□□ -1.05
LETMD1-233ENST00000552433 ZMYM5Q9UJ78 669 aa8.49□□□□□ -1.05
LETMD1-233ENST00000552433 SSU72P8A0A1W2PR75 194 aa8.48□□□□□ -1.05
LETMD1-233ENST00000552433 FKTNO75072 461 aa8.48□□□□□ -1.05
LETMD1-233ENST00000552433 DUSP4Q13115 394 aa8.48□□□□□ -1.05
LETMD1-233ENST00000552433 NR0B2Q15466 257 aa8.48□□□□□ -1.05
LETMD1-233ENST00000552433 TMEM192Q8IY95 271 aa8.48□□□□□ -1.05
LETMD1-233ENST00000552433 DAGLBQ8NCG7 672 aa8.48□□□□□ -1.05
LETMD1-233ENST00000552433 PRDM14Q9GZV8 571 aa8.48□□□□□ -1.05
LETMD1-233ENST00000552433 ZNF281Q9Y2X9 895 aa8.48□□□□□ -1.05
LETMD1-233ENST00000552433 FAM86C2PA6NEL3 165 aa8.47□□□□□ -1.05
LETMD1-233ENST00000552433 NOTOA8MTQ0 251 aa8.47□□□□□ -1.05
LETMD1-233ENST00000552433 MEIS1O00470 390 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms