RNA–Protein interactions for RNA: ENST00000551912.1

DDX54-209, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-209ENST00000551912 SP3Q02447 781 aa21.9■■□□□ 1.1
DDX54-209ENST00000551912 ADCK5Q3MIX3 580 aa21.9■■□□□ 1.1
DDX54-209ENST00000551912 ANKRD13CQ8N6S4 541 aa21.9■■□□□ 1.1
DDX54-209ENST00000551912 DCAF4Q8WV16 495 aa21.9■■□□□ 1.1
DDX54-209ENST00000551912 MTA3Q9BTC8 594 aa21.9■■□□□ 1.1
DDX54-209ENST00000551912 PRDM10Q9NQV6 1147 aa21.9■■□□□ 1.1
DDX54-209ENST00000551912 ISY1Q9ULR0 285 aaKnown RBP21.9■■□□□ 1.1
DDX54-209ENST00000551912 MYPNQ86TC9 1320 aa21.89■■□□□ 1.1
DDX54-209ENST00000551912 SPDYE16A6NNV3 312 aaPredicted RBP21.89■■□□□ 1.09
DDX54-209ENST00000551912 HMGB1P09429 215 aaKnown RBP21.89■■□□□ 1.09
DDX54-209ENST00000551912 WTAPQ15007 396 aa21.89■■□□□ 1.09
DDX54-209ENST00000551912 TMEM67Q5HYA8 995 aa21.89■■□□□ 1.09
DDX54-209ENST00000551912 LBX2Q6XYB7 198 aa21.89■■□□□ 1.09
DDX54-209ENST00000551912 PNMA1Q8ND90 353 aa21.89■■□□□ 1.09
DDX54-209ENST00000551912 CHMP4CQ96CF2 233 aa21.89■■□□□ 1.09
DDX54-209ENST00000551912 SEC24BO95487 1268 aa21.88■■□□□ 1.09
DDX54-209ENST00000551912 DSG3P32926 999 aa21.88■■□□□ 1.09
DDX54-209ENST00000551912 COL9A3Q14050 684 aaPredicted RBP21.88■■□□□ 1.09
DDX54-209ENST00000551912 FAM110CQ1W6H9 321 aa21.88■■□□□ 1.09
DDX54-209ENST00000551912 SAMD1Q6SPF0 538 aaPredicted RBP21.88■■□□□ 1.09
DDX54-209ENST00000551912 IGDCC4Q8TDY8 1250 aa21.88■■□□□ 1.09
DDX54-209ENST00000551912 TMEM87BQ96K49 555 aa21.88■■□□□ 1.09
DDX54-209ENST00000551912 JAKMIP1Q96N16 626 aaKnown RBP21.88■■□□□ 1.09
DDX54-209ENST00000551912 FBXO28Q9NVF7 368 aa21.88■■□□□ 1.09
DDX54-209ENST00000551912 FEM1BQ9UK73 627 aa21.88■■□□□ 1.09
DDX54-209ENST00000551912 PDHBP11177 359 aa21.87■■□□□ 1.09
DDX54-209ENST00000551912 CCDC96Q2M329 555 aa21.87■■□□□ 1.09
DDX54-209ENST00000551912 DHX32Q7L7V1 743 aaKnown RBP21.87■■□□□ 1.09
DDX54-209ENST00000551912 ERO1AQ96HE7 468 aa21.87■■□□□ 1.09
DDX54-209ENST00000551912 SLF1Q9BQI6 1058 aa21.87■■□□□ 1.09
DDX54-209ENST00000551912 PAGR1Q9BTK6 254 aa21.87■■□□□ 1.09
DDX54-209ENST00000551912 PPP1R9AQ9ULJ8 1098 aa21.87■■□□□ 1.09
DDX54-209ENST00000551912 RABGAP1Q9Y3P9 1069 aa21.87■■□□□ 1.09
DDX54-209ENST00000551912 CASP8AP2Q9UKL3 1982 aa21.87■■□□□ 1.09
DDX54-209ENST00000551912 WDR19Q8NEZ3 1342 aa21.86■■□□□ 1.09
DDX54-209ENST00000551912 TMEM232C9JQI7 657 aa21.86■■□□□ 1.09
DDX54-209ENST00000551912 PSMA5P28066 241 aa21.86■■□□□ 1.09
DDX54-209ENST00000551912 KIF22Q14807 665 aa21.86■■□□□ 1.09
DDX54-209ENST00000551912 KCTD1Q719H9 257 aa21.86■■□□□ 1.09
DDX54-209ENST00000551912 RASGRP2Q7LDG7 609 aa21.86■■□□□ 1.09
DDX54-209ENST00000551912 PRPF38AQ8NAV1 312 aaKnown RBP21.86■■□□□ 1.09
DDX54-209ENST00000551912 ATG4CQ96DT6 458 aa21.86■■□□□ 1.09
DDX54-209ENST00000551912 RBPJLQ9UBG7 517 aa21.86■■□□□ 1.09
DDX54-209ENST00000551912 MORF4L1Q9UBU8 362 aa21.86■■□□□ 1.09
DDX54-209ENST00000551912 RLFQ13129 1914 aa21.85■■□□□ 1.09
DDX54-209ENST00000551912 SH2B2O14492 632 aaPredicted RBP21.85■■□□□ 1.09
DDX54-209ENST00000551912 SNHG28P0DPA3 235 aa21.85■■□□□ 1.09
DDX54-209ENST00000551912 STAT2P52630 851 aa21.85■■□□□ 1.09
DDX54-209ENST00000551912 LACTBP83111 547 aaPredicted RBP21.85■■□□□ 1.09
DDX54-209ENST00000551912 EXOSC10Q01780 885 aaKnown RBP21.85■■□□□ 1.09
DDX54-209ENST00000551912 IKQ13123 557 aaPredicted RBP21.85■■□□□ 1.09
DDX54-209ENST00000551912 BLOC1S2Q6QNY1 142 aa21.85■■□□□ 1.09
DDX54-209ENST00000551912 POTEEQ6S8J3 1075 aa21.85■■□□□ 1.09
DDX54-209ENST00000551912 FAM160B2Q86V87 743 aa21.85■■□□□ 1.09
DDX54-209ENST00000551912 MB21D1Q8N884 522 aa21.85■■□□□ 1.09
DDX54-209ENST00000551912 GPRC5AQ8NFJ5 357 aa21.85■■□□□ 1.09
DDX54-209ENST00000551912 CD99L2Q8TCZ2 262 aa21.85■■□□□ 1.09
DDX54-209ENST00000551912 CHURC1Q8WUH1 139 aa21.85■■□□□ 1.09
DDX54-209ENST00000551912 LY9Q9HBG7 655 aa21.85■■□□□ 1.09
DDX54-209ENST00000551912 SENP2Q9HC62 589 aa21.85■■□□□ 1.09
DDX54-209ENST00000551912 TXNRD2Q9NNW7 524 aa21.85■■□□□ 1.09
DDX54-209ENST00000551912 PLA2G6O60733 806 aa21.84■■□□□ 1.09
DDX54-209ENST00000551912 LIFRP42702 1097 aa21.84■■□□□ 1.09
DDX54-209ENST00000551912 ERVK-9P63128 1117 aa21.84■■□□□ 1.09
DDX54-209ENST00000551912 ERVK-24P63145 666 aa21.84■■□□□ 1.09
DDX54-209ENST00000551912 ZNF543Q08ER8 600 aa21.84■■□□□ 1.09
DDX54-209ENST00000551912 TMTC2Q8N394 836 aa21.84■■□□□ 1.09
DDX54-209ENST00000551912 KIFC2Q96AC6 838 aa21.84■■□□□ 1.09
DDX54-209ENST00000551912 LRRC2Q9BYS8 371 aa21.84■■□□□ 1.09
DDX54-209ENST00000551912 GPHNQ9NQX3 736 aaPredicted RBP21.84■■□□□ 1.09
DDX54-209ENST00000551912 ADAMTS5Q9UNA0 930 aa21.84■■□□□ 1.09
DDX54-209ENST00000551912 PARP14Q460N5 1801 aa21.84■■□□□ 1.09
DDX54-209ENST00000551912 FRMPD2Q68DX3 1309 aaPredicted RBP21.83■■□□□ 1.09
DDX54-209ENST00000551912 VWA5AO00534 786 aa21.83■■□□□ 1.09
DDX54-209ENST00000551912 PEX10O60683 326 aa21.83■■□□□ 1.09
DDX54-209ENST00000551912 CNMDO75829 334 aa21.83■■□□□ 1.09
DDX54-209ENST00000551912 CASTP20810 708 aaKnown RBP21.83■■□□□ 1.09
DDX54-209ENST00000551912 ANAPC15P60006 121 aa21.83■■□□□ 1.09
DDX54-209ENST00000551912 ARHGEF6Q15052 776 aa21.83■■□□□ 1.09
DDX54-209ENST00000551912 GPATCH4Q5T3I0 446 aaKnown RBP21.83■■□□□ 1.09
DDX54-209ENST00000551912 NFXL1Q6ZNB6 911 aa21.83■■□□□ 1.09
DDX54-209ENST00000551912 CATIPQ7Z7H3 387 aa21.83■■□□□ 1.09
DDX54-209ENST00000551912 TCEANC2Q96MN5 208 aa21.83■■□□□ 1.09
DDX54-209ENST00000551912 GPCPD1Q9NPB8 672 aa21.83■■□□□ 1.09
DDX54-209ENST00000551912 BTBD7Q9P203 1132 aa21.83■■□□□ 1.09
DDX54-209ENST00000551912 CCDC69A6NI79 296 aa21.82■■□□□ 1.08
DDX54-209ENST00000551912 CPA1P15085 419 aa21.82■■□□□ 1.08
DDX54-209ENST00000551912 Q3C1V9 767 aa21.82■■□□□ 1.08
DDX54-209ENST00000551912 ASPRV1Q53RT3 343 aa21.82■■□□□ 1.08
DDX54-209ENST00000551912 A0A0G2JMZ2 1700 aa21.81■■□□□ 1.08
DDX54-209ENST00000551912 ZBED4O75132 1171 aa21.81■■□□□ 1.08
DDX54-209ENST00000551912 PARP1P09874 1014 aaKnown RBP21.81■■□□□ 1.08
DDX54-209ENST00000551912 RPS6KB1P23443 525 aa21.81■■□□□ 1.08
DDX54-209ENST00000551912 PSMC4P43686 418 aa21.81■■□□□ 1.08
DDX54-209ENST00000551912 FCGRTP55899 365 aa21.81■■□□□ 1.08
DDX54-209ENST00000551912 CCNA1P78396 465 aa21.81■■□□□ 1.08
DDX54-209ENST00000551912 FGD1P98174 961 aa21.81■■□□□ 1.08
DDX54-209ENST00000551912 TTBK2Q6IQ55 1244 aa21.81■■□□□ 1.08
DDX54-209ENST00000551912 BTNL9Q6UXG8 535 aa21.81■■□□□ 1.08
DDX54-209ENST00000551912 TM6SF1Q9BZW5 370 aa21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms