RNA–Protein interactions for RNA: ENST00000551344.1

DDX54-208, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 872 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-208ENST00000551344 SLC15A5A6NIM6 579 aa22.51■■□□□ 1.19
DDX54-208ENST00000551344 TSPY2A6NKD2 308 aa22.51■■□□□ 1.19
DDX54-208ENST00000551344 STRNO43815 780 aa22.51■■□□□ 1.19
DDX54-208ENST00000551344 NDUFB10O96000 172 aa22.51■■□□□ 1.19
DDX54-208ENST00000551344 PTPREP23469 700 aa22.51■■□□□ 1.19
DDX54-208ENST00000551344 GJA8P48165 433 aa22.51■■□□□ 1.19
DDX54-208ENST00000551344 WDR78Q5VTH9 848 aa22.51■■□□□ 1.19
DDX54-208ENST00000551344 MOV10L1Q9BXT6 1211 aaKnown RBP22.51■■□□□ 1.19
DDX54-208ENST00000551344 UNC93B1Q9H1C4 597 aa22.51■■□□□ 1.19
DDX54-208ENST00000551344 PPP1R9AQ9ULJ8 1098 aa22.51■■□□□ 1.19
DDX54-208ENST00000551344 IVNS1ABPQ9Y6Y0 642 aa22.51■■□□□ 1.19
DDX54-208ENST00000551344 RANBP6O60518 1105 aaKnown RBP22.5■■□□□ 1.19
DDX54-208ENST00000551344 PCP11498 1178 aaKnown RBP22.5■■□□□ 1.19
DDX54-208ENST00000551344 MAP2K5Q13163 448 aa22.5■■□□□ 1.19
DDX54-208ENST00000551344 GMCL1P1Q8NEA9 526 aa22.5■■□□□ 1.19
DDX54-208ENST00000551344 FBXO28Q9NVF7 368 aa22.5■■□□□ 1.19
DDX54-208ENST00000551344 RLFQ13129 1914 aa22.49■■□□□ 1.19
DDX54-208ENST00000551344 GSPT1P15170 499 aaKnown RBP22.49■■□□□ 1.19
DDX54-208ENST00000551344 MROH8Q9H579 483 aa22.49■■□□□ 1.19
DDX54-208ENST00000551344 IL17RBQ9NRM6 502 aa22.49■■□□□ 1.19
DDX54-208ENST00000551344 TACC3Q9Y6A5 838 aa22.49■■□□□ 1.19
DDX54-208ENST00000551344 VWA5AO00534 786 aa22.48■■□□□ 1.19
DDX54-208ENST00000551344 SLC25A27O95847 323 aa22.48■■□□□ 1.19
DDX54-208ENST00000551344 ERCC3P19447 782 aa22.48■■□□□ 1.19
DDX54-208ENST00000551344 GRB14Q14449 540 aa22.48■■□□□ 1.19
DDX54-208ENST00000551344 PLS1Q14651 629 aa22.48■■□□□ 1.19
DDX54-208ENST00000551344 TMEM132BQ14DG7 1078 aa22.48■■□□□ 1.19
DDX54-208ENST00000551344 SAMD1Q6SPF0 538 aaPredicted RBP22.48■■□□□ 1.19
DDX54-208ENST00000551344 PRPF38AQ8NAV1 312 aaKnown RBP22.48■■□□□ 1.19
DDX54-208ENST00000551344 TRIB2Q92519 343 aa22.48■■□□□ 1.19
DDX54-208ENST00000551344 NUP88Q99567 741 aaPredicted RBP22.48■■□□□ 1.19
DDX54-208ENST00000551344 APBA2Q99767 749 aa22.48■■□□□ 1.19
DDX54-208ENST00000551344 SLF1Q9BQI6 1058 aa22.48■■□□□ 1.19
DDX54-208ENST00000551344 RPTORQ8N122 1335 aa22.48■■□□□ 1.19
DDX54-208ENST00000551344 SGPL1O95470 568 aa22.47■■□□□ 1.19
DDX54-208ENST00000551344 HOXC6P09630 235 aa22.47■■□□□ 1.19
DDX54-208ENST00000551344 AKNAD1Q5T1N1 836 aa22.47■■□□□ 1.19
DDX54-208ENST00000551344 SLFN13Q68D06 897 aa22.47■■□□□ 1.19
DDX54-208ENST00000551344 MFSD6Q6ZSS7 791 aa22.47■■□□□ 1.19
DDX54-208ENST00000551344 LRRC47Q8N1G4 583 aaKnown RBP22.47■■□□□ 1.19
DDX54-208ENST00000551344 U2AF1L4Q8WU68 220 aaKnown RBP22.47■■□□□ 1.19
DDX54-208ENST00000551344 DSCC1Q9BVC3 393 aa22.47■■□□□ 1.19
DDX54-208ENST00000551344 RNF41Q9H4P4 317 aaPredicted RBP22.47■■□□□ 1.19
DDX54-208ENST00000551344 HMX1Q9NP08 348 aaPredicted RBP22.47■■□□□ 1.19
DDX54-208ENST00000551344 PAK6Q9NQU5 681 aaPredicted RBP22.47■■□□□ 1.19
DDX54-208ENST00000551344 TOMM22Q9NS69 142 aa22.47■■□□□ 1.19
DDX54-208ENST00000551344 TCP11L1Q9NUJ3 509 aa22.47■■□□□ 1.19
DDX54-208ENST00000551344 STX8Q9UNK0 236 aa22.47■■□□□ 1.19
DDX54-208ENST00000551344 BRCA2P51587 3418 aa22.47■■□□□ 1.19
DDX54-208ENST00000551344 PLXNB2O15031 1838 aa22.46■■□□□ 1.19
DDX54-208ENST00000551344 ZNF213O14771 459 aa22.46■■□□□ 1.19
DDX54-208ENST00000551344 ZKSCAN1P17029 563 aaPredicted RBP22.46■■□□□ 1.19
DDX54-208ENST00000551344 NOVP48745 357 aa22.46■■□□□ 1.19
DDX54-208ENST00000551344 HAND2P61296 217 aa22.46■■□□□ 1.19
DDX54-208ENST00000551344 RIOX2Q8IUF8 465 aa22.46■■□□□ 1.19
DDX54-208ENST00000551344 STAG1Q8WVM7 1258 aa22.46■■□□□ 1.19
DDX54-208ENST00000551344 FEM1BQ9UK73 627 aa22.46■■□□□ 1.19
DDX54-208ENST00000551344 PDE4DIPQ5VU43 2346 aa22.45■■□□□ 1.18
DDX54-208ENST00000551344 BMP3P12645 472 aa22.45■■□□□ 1.18
DDX54-208ENST00000551344 STAT3P40763 770 aa22.45■■□□□ 1.18
DDX54-208ENST00000551344 NT5C2P49902 561 aa22.45■■□□□ 1.18
DDX54-208ENST00000551344 RRP12Q5JTH9 1297 aaKnown RBP22.45■■□□□ 1.18
DDX54-208ENST00000551344 MAP3K21Q5TCX8 1036 aa22.45■■□□□ 1.18
DDX54-208ENST00000551344 NCAPG2Q86XI2 1143 aa22.45■■□□□ 1.18
DDX54-208ENST00000551344 ABRAQ8N0Z2 381 aa22.45■■□□□ 1.18
DDX54-208ENST00000551344 RUFY2Q8WXA3 655 aa22.45■■□□□ 1.18
DDX54-208ENST00000551344 SHISA4Q96DD7 197 aa22.45■■□□□ 1.18
DDX54-208ENST00000551344 DEFB118Q96PH6 123 aa22.45■■□□□ 1.18
DDX54-208ENST00000551344 CTNNA3Q9UI47 895 aa22.45■■□□□ 1.18
DDX54-208ENST00000551344 NMT2O60551 498 aa22.44■■□□□ 1.18
DDX54-208ENST00000551344 COPB2P35606 906 aa22.44■■□□□ 1.18
DDX54-208ENST00000551344 TRIM32Q13049 653 aa22.44■■□□□ 1.18
DDX54-208ENST00000551344 DPP9Q86TI2 863 aa22.44■■□□□ 1.18
DDX54-208ENST00000551344 REPS2Q8NFH8 660 aa22.44■■□□□ 1.18
DDX54-208ENST00000551344 GMCL1Q96IK5 515 aa22.44■■□□□ 1.18
DDX54-208ENST00000551344 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.44■■□□□ 1.186e-7■■□□□ 12.6
DDX54-208ENST00000551344 ZNF214Q9UL59 606 aaPredicted RBP22.44■■□□□ 1.18
DDX54-208ENST00000551344 ZBED4O75132 1171 aa22.43■■□□□ 1.18
DDX54-208ENST00000551344 TFRCP02786 760 aaKnown RBP22.43■■□□□ 1.18
DDX54-208ENST00000551344 FDX1P10109 184 aa22.43■■□□□ 1.18
DDX54-208ENST00000551344 ADORA2AP29274 412 aa22.43■■□□□ 1.18
DDX54-208ENST00000551344 SLC1A4P43007 532 aa22.43■■□□□ 1.18
DDX54-208ENST00000551344 CCL14Q16627 93 aa22.43■■□□□ 1.18
DDX54-208ENST00000551344 NBPF3Q9H094 633 aa22.43■■□□□ 1.18
DDX54-208ENST00000551344 SLC5A4Q9NY91 659 aa22.43■■□□□ 1.18
DDX54-208ENST00000551344 MYH4Q9Y623 1939 aa22.43■■□□□ 1.18
DDX54-208ENST00000551344 A0A0G2JMZ2 1700 aa22.43■■□□□ 1.18
DDX54-208ENST00000551344 RAD50Q92878 1312 aa22.42■■□□□ 1.18
DDX54-208ENST00000551344 ATP2A1O14983 1001 aa22.42■■□□□ 1.18
DDX54-208ENST00000551344 PLA2G6O60733 806 aa22.42■■□□□ 1.18
DDX54-208ENST00000551344 FCER1AP12319 257 aa22.42■■□□□ 1.18
DDX54-208ENST00000551344 PRKAR2AP13861 404 aaKnown RBP22.42■■□□□ 1.18
DDX54-208ENST00000551344 CHMLP26374 656 aa22.42■■□□□ 1.18
DDX54-208ENST00000551344 CACNB2Q08289 660 aaPredicted RBP22.42■■□□□ 1.18
DDX54-208ENST00000551344 IMMTQ16891 758 aaKnown RBP22.42■■□□□ 1.18
DDX54-208ENST00000551344 MFSD14CQ5VZR4 134 aa22.42■■□□□ 1.18
DDX54-208ENST00000551344 CENPQQ7L2Z9 268 aaPredicted RBP22.42■■□□□ 1.18
DDX54-208ENST00000551344 CHURC1Q8WUH1 139 aa22.42■■□□□ 1.18
DDX54-208ENST00000551344 ESR2Q92731 530 aa22.42■■□□□ 1.18
DDX54-208ENST00000551344 TTC14Q96N46 770 aa22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms