RNA–Protein interactions for RNA: ENST00000551338.1

RAB5C-208, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-208ENST00000551338 TRAPPC10P48553 1259 aa13.18□□□□□ -0.3
RAB5C-208ENST00000551338 ZNF75DP51815 510 aa13.18□□□□□ -0.3
RAB5C-208ENST00000551338 ATP2C1P98194 919 aaPredicted RBP13.18□□□□□ -0.3
RAB5C-208ENST00000551338 DPCR1Q3MIW9 517 aa13.18□□□□□ -0.3
RAB5C-208ENST00000551338 PLA2G4DQ86XP0 818 aa13.18□□□□□ -0.3
RAB5C-208ENST00000551338 CLEC10AQ8IUN9 316 aa13.18□□□□□ -0.3
RAB5C-208ENST00000551338 ZFPM1Q8IX07 1006 aa13.18□□□□□ -0.3
RAB5C-208ENST00000551338 CCDC148Q8NFR7 591 aa13.18□□□□□ -0.3
RAB5C-208ENST00000551338 IDI2Q9BXS1 227 aa13.18□□□□□ -0.3
RAB5C-208ENST00000551338 CSRNP2Q9H175 543 aa13.18□□□□□ -0.3
RAB5C-208ENST00000551338 DNAJC18Q9H819 358 aa13.18□□□□□ -0.3
RAB5C-208ENST00000551338 MTMR4Q9NYA4 1195 aa13.18□□□□□ -0.3
RAB5C-208ENST00000551338 FAM13BQ9NYF5 915 aa13.18□□□□□ -0.3
RAB5C-208ENST00000551338 PCDHA4Q9UN74 947 aa13.18□□□□□ -0.3
RAB5C-208ENST00000551338 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.18□□□□□ -0.3
RAB5C-208ENST00000551338 BIN1O00499 593 aa13.17□□□□□ -0.3
RAB5C-208ENST00000551338 PPIP5K2O43314 1243 aa13.17□□□□□ -0.3
RAB5C-208ENST00000551338 C21orf2O43822 256 aa13.17□□□□□ -0.3
RAB5C-208ENST00000551338 SLURP2P0DP57 97 aa13.17□□□□□ -0.3
RAB5C-208ENST00000551338 SNHG28P0DPA3 235 aa13.17□□□□□ -0.3
RAB5C-208ENST00000551338 PDHBP11177 359 aa13.17□□□□□ -0.3
RAB5C-208ENST00000551338 SMARCA1P28370 1054 aa13.17□□□□□ -0.3
RAB5C-208ENST00000551338 PNOCQ13519 176 aa13.17□□□□□ -0.3
RAB5C-208ENST00000551338 ZNF174Q15697 407 aa13.17□□□□□ -0.3
RAB5C-208ENST00000551338 LONRF3Q496Y0 759 aa13.17□□□□□ -0.3
RAB5C-208ENST00000551338 USP17L2Q6R6M4 530 aa13.17□□□□□ -0.3
RAB5C-208ENST00000551338 SARM1Q6SZW1 724 aa13.17□□□□□ -0.3
RAB5C-208ENST00000551338 PIK3AP1Q6ZUJ8 805 aa13.17□□□□□ -0.3
RAB5C-208ENST00000551338 USP49Q70CQ1 688 aa13.17□□□□□ -0.3
RAB5C-208ENST00000551338 ELOA2Q8IYF1 753 aaPredicted RBP13.17□□□□□ -0.3
RAB5C-208ENST00000551338 FAM177A1Q8N128 213 aaPredicted RBP13.17□□□□□ -0.3
RAB5C-208ENST00000551338 LRRC47Q8N1G4 583 aaKnown RBP13.17□□□□□ -0.3
RAB5C-208ENST00000551338 AOPEPQ8N6M6 819 aa13.17□□□□□ -0.3
RAB5C-208ENST00000551338 BPIFA3Q9BQP9 254 aa13.17□□□□□ -0.3
RAB5C-208ENST00000551338 BARHL2Q9NY43 387 aa13.17□□□□□ -0.3
RAB5C-208ENST00000551338 FAM198AQ9UFP1 575 aa13.17□□□□□ -0.3
RAB5C-208ENST00000551338 SERTAD1Q9UHV2 236 aa13.17□□□□□ -0.3
RAB5C-208ENST00000551338 EP400Q96L91 3159 aa13.16□□□□□ -0.3
RAB5C-208ENST00000551338 USP17L5A8MUK1 530 aa13.16□□□□□ -0.3
RAB5C-208ENST00000551338 GOLGA6L19H0YKK7 550 aa13.16□□□□□ -0.3
RAB5C-208ENST00000551338 FOXN1O15353 648 aa13.16□□□□□ -0.3
RAB5C-208ENST00000551338 ACTN4O43707 911 aaKnown RBP13.16□□□□□ -0.3
RAB5C-208ENST00000551338 NPM3O75607 178 aaKnown RBP13.16□□□□□ -0.3
RAB5C-208ENST00000551338 PRR29P0C7W0 189 aa13.16□□□□□ -0.3
RAB5C-208ENST00000551338 CACNB3P54284 484 aa13.16□□□□□ -0.3
RAB5C-208ENST00000551338 CCDC93Q567U6 631 aa13.16□□□□□ -0.3
RAB5C-208ENST00000551338 SH3BP5LQ7L8J4 393 aa13.16□□□□□ -0.3
RAB5C-208ENST00000551338 HEATR3Q7Z4Q2 680 aa13.16□□□□□ -0.3
RAB5C-208ENST00000551338 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.16□□□□□ -0.3
RAB5C-208ENST00000551338 CNNM3Q8NE01 707 aa13.16□□□□□ -0.3
RAB5C-208ENST00000551338 RASGRP4Q8TDF6 673 aa13.16□□□□□ -0.3
RAB5C-208ENST00000551338 FERMT2Q96AC1 680 aa13.16□□□□□ -0.3
RAB5C-208ENST00000551338 SERPINA10Q9UK55 444 aa13.16□□□□□ -0.3
RAB5C-208ENST00000551338 FRMPD2Q68DX3 1309 aaPredicted RBP13.15□□□□□ -0.3
RAB5C-208ENST00000551338 A0A087X0B3 334 aa13.15□□□□□ -0.3
RAB5C-208ENST00000551338 DDTLA6NHG4 134 aaPredicted RBP13.15□□□□□ -0.3
RAB5C-208ENST00000551338 ZNF500O60304 480 aaPredicted RBP13.15□□□□□ -0.3
RAB5C-208ENST00000551338 KCNA3P22001 575 aa13.15□□□□□ -0.3
RAB5C-208ENST00000551338 MDM2Q00987 491 aaPredicted RBP13.15□□□□□ -0.3
RAB5C-208ENST00000551338 SF3B2Q13435 895 aaKnown RBP13.15□□□□□ -0.3
RAB5C-208ENST00000551338 ASPRV1Q53RT3 343 aa13.15□□□□□ -0.3
RAB5C-208ENST00000551338 GALNT17Q6IS24 598 aa13.15□□□□□ -0.3
RAB5C-208ENST00000551338 TTLL6Q8N841 843 aa13.15□□□□□ -0.3
RAB5C-208ENST00000551338 PIGSQ96S52 555 aa13.15□□□□□ -0.3
RAB5C-208ENST00000551338 RIOX1Q9H6W3 641 aa13.15□□□□□ -0.3
RAB5C-208ENST00000551338 PCDHA6Q9UN73 950 aa13.15□□□□□ -0.3
RAB5C-208ENST00000551338 PCDHA8Q9Y5H6 950 aa13.15□□□□□ -0.3
RAB5C-208ENST00000551338 ATRNL1Q5VV63 1379 aa13.15□□□□□ -0.3
RAB5C-208ENST00000551338 FAM196BA6NMK8 535 aa13.14□□□□□ -0.31
RAB5C-208ENST00000551338 BECN2A8MW95 431 aa13.14□□□□□ -0.31
RAB5C-208ENST00000551338 POLR2DO15514 142 aaKnown RBP13.14□□□□□ -0.31
RAB5C-208ENST00000551338 TTLL1O95922 423 aa13.14□□□□□ -0.31
RAB5C-208ENST00000551338 DPEP1P16444 411 aa13.14□□□□□ -0.31
RAB5C-208ENST00000551338 CDC25BP30305 580 aa13.14□□□□□ -0.31
RAB5C-208ENST00000551338 RBM5P52756 815 aaKnown RBP eCLIP13.14□□□□□ -0.31
RAB5C-208ENST00000551338 EIF6P56537 245 aaKnown RBP13.14□□□□□ -0.31
RAB5C-208ENST00000551338 PTGDRQ13258 359 aa13.14□□□□□ -0.31
RAB5C-208ENST00000551338 FOXP4Q8IVH2 680 aaPredicted RBP13.14□□□□□ -0.31
RAB5C-208ENST00000551338 C4orf32Q8N8J7 132 aa13.14□□□□□ -0.31
RAB5C-208ENST00000551338 SPC24Q8NBT2 197 aa13.14□□□□□ -0.31
RAB5C-208ENST00000551338 SLC16A10Q8TF71 515 aa13.14□□□□□ -0.31
RAB5C-208ENST00000551338 SYMPKQ92797 1274 aaKnown RBP13.14□□□□□ -0.31
RAB5C-208ENST00000551338 RRP36Q96EU6 259 aaKnown RBP13.14□□□□□ -0.31
RAB5C-208ENST00000551338 CCDC17Q96LX7 622 aa13.14□□□□□ -0.31
RAB5C-208ENST00000551338 PSMD1Q99460 953 aa13.14□□□□□ -0.31
RAB5C-208ENST00000551338 TRIM5Q9C035 493 aa13.14□□□□□ -0.31
RAB5C-208ENST00000551338 UBA5Q9GZZ9 404 aa13.14□□□□□ -0.31
RAB5C-208ENST00000551338 NAT10Q9H0A0 1025 aaKnown RBP13.14□□□□□ -0.31
RAB5C-208ENST00000551338 ZMYND12Q9H0C1 365 aa13.14□□□□□ -0.31
RAB5C-208ENST00000551338 DHX36Q9H2U1 1008 aaKnown RBP13.14□□□□□ -0.31
RAB5C-208ENST00000551338 PCDHA5Q9Y5H7 936 aa13.14□□□□□ -0.31
RAB5C-208ENST00000551338 CCDC194A0A1B0GVG4 234 aa13.13□□□□□ -0.31
RAB5C-208ENST00000551338 ESYT2A0FGR8 921 aa13.13□□□□□ -0.31
RAB5C-208ENST00000551338 hCG_1984214I3L0E3 225 aa13.13□□□□□ -0.31
RAB5C-208ENST00000551338 MCM7P33993 719 aa13.13□□□□□ -0.31
RAB5C-208ENST00000551338 NAPAP54920 295 aa13.13□□□□□ -0.31
RAB5C-208ENST00000551338 ZNF543Q08ER8 600 aa13.13□□□□□ -0.31
RAB5C-208ENST00000551338 TCP10Q12799 353 aa13.13□□□□□ -0.31
RAB5C-208ENST00000551338 NCAPHQ15003 741 aa13.13□□□□□ -0.31
RAB5C-208ENST00000551338 POSTNQ15063 836 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms