RNA–Protein interactions for RNA: ENST00000551242.5

ERBB3-219, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 2,755 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-219ENST00000551242 KRT14P02533 472 aa13.71□□□□□ -0.21
ERBB3-219ENST00000551242 SNRPA1P09661 255 aaKnown RBP13.71□□□□□ -0.21
ERBB3-219ENST00000551242 RNF187Q5TA31 235 aaPredicted RBP13.71□□□□□ -0.21
ERBB3-219ENST00000551242 PLBD2Q8NHP8 589 aa13.71□□□□□ -0.21
ERBB3-219ENST00000551242 NELFBQ8WX92 580 aa13.71□□□□□ -0.21
ERBB3-219ENST00000551242 ZKSCAN4Q969J2 545 aaPredicted RBP13.71□□□□□ -0.21
ERBB3-219ENST00000551242 AXIN2Q9Y2T1 843 aa13.71□□□□□ -0.21
ERBB3-219ENST00000551242 WDR17Q8IZU2 1322 aa13.71□□□□□ -0.21
ERBB3-219ENST00000551242 MYO5AQ9Y4I1 1855 aaKnown RBP13.71□□□□□ -0.21
ERBB3-219ENST00000551242 GUCY1A3Q02108 690 aa13.71□□□□□ -0.21
ERBB3-219ENST00000551242 TRIM14Q14142 442 aa13.71□□□□□ -0.21
ERBB3-219ENST00000551242 B4GALNT4Q76KP1 1039 aa13.71□□□□□ -0.21
ERBB3-219ENST00000551242 SGMS1Q86VZ5 419 aa13.71□□□□□ -0.21
ERBB3-219ENST00000551242 TRIM22Q8IYM9 498 aa13.71□□□□□ -0.21
ERBB3-219ENST00000551242 GIMAP7Q8NHV1 300 aa13.71□□□□□ -0.21
ERBB3-219ENST00000551242 EEF2KMTQ96G04 330 aa13.71□□□□□ -0.21
ERBB3-219ENST00000551242 CENPHQ9H3R5 247 aa13.71□□□□□ -0.21
ERBB3-219ENST00000551242 AATFQ9NY61 560 aaKnown RBP eCLIP13.71□□□□□ -0.21
ERBB3-219ENST00000551242 EHD2Q9NZN4 543 aa13.71□□□□□ -0.21
ERBB3-219ENST00000551242 CEP131Q9UPN4 1083 aa13.71□□□□□ -0.21
ERBB3-219ENST00000551242 NFAT5O94916 1531 aa13.71□□□□□ -0.22
ERBB3-219ENST00000551242 XDHP47989 1333 aa13.71□□□□□ -0.22
ERBB3-219ENST00000551242 STK36Q9NRP7 1315 aa13.71□□□□□ -0.22
ERBB3-219ENST00000551242 hCG_1642624A0A1W2PR95 340 aa13.71□□□□□ -0.22
ERBB3-219ENST00000551242 TRIM49BA6NDI0 452 aa13.71□□□□□ -0.22
ERBB3-219ENST00000551242 KRT86O43790 486 aa13.71□□□□□ -0.22
ERBB3-219ENST00000551242 OPA1O60313 960 aa13.71□□□□□ -0.22
ERBB3-219ENST00000551242 FSBPO95073 299 aa13.71□□□□□ -0.22
ERBB3-219ENST00000551242 APBA1Q02410 837 aa13.71□□□□□ -0.22
ERBB3-219ENST00000551242 PAK1Q13153 545 aa13.71□□□□□ -0.22
ERBB3-219ENST00000551242 RRP12Q5JTH9 1297 aaKnown RBP13.71□□□□□ -0.22
ERBB3-219ENST00000551242 TTLL7Q6ZT98 887 aa13.71□□□□□ -0.22
ERBB3-219ENST00000551242 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.71□□□□□ -0.22
ERBB3-219ENST00000551242 WASF1Q92558 559 aa13.71□□□□□ -0.22
ERBB3-219ENST00000551242 RUFY1Q96T51 708 aa13.71□□□□□ -0.22
ERBB3-219ENST00000551242 TRIM75PA6NK02 468 aa13.7□□□□□ -0.22
ERBB3-219ENST00000551242 IDH1O75874 414 aaKnown RBP13.7□□□□□ -0.22
ERBB3-219ENST00000551242 CXCR5P32302 372 aa13.7□□□□□ -0.22
ERBB3-219ENST00000551242 ACTN3Q08043 901 aaPredicted RBP13.7□□□□□ -0.22
ERBB3-219ENST00000551242 AMOTL1Q8IY63 956 aa13.7□□□□□ -0.22
ERBB3-219ENST00000551242 TTC5Q8N0Z6 440 aa13.7□□□□□ -0.22
ERBB3-219ENST00000551242 AGPAT5Q9NUQ2 364 aa13.7□□□□□ -0.22
ERBB3-219ENST00000551242 CWC25Q9NXE8 425 aaPredicted RBP13.7□□□□□ -0.22
ERBB3-219ENST00000551242 GDAQ9Y2T3 454 aa13.7□□□□□ -0.22
ERBB3-219ENST00000551242 TACC3Q9Y6A5 838 aa13.7□□□□□ -0.22
ERBB3-219ENST00000551242 SEC24CP53992 1094 aa13.7□□□□□ -0.22
ERBB3-219ENST00000551242 RTN1Q16799 776 aa13.7□□□□□ -0.22
ERBB3-219ENST00000551242 TSR1Q2NL82 804 aaKnown RBP13.7□□□□□ -0.22
ERBB3-219ENST00000551242 CCDC70Q6NSX1 233 aa13.7□□□□□ -0.22
ERBB3-219ENST00000551242 CREG2Q8IUH2 290 aa13.7□□□□□ -0.22
ERBB3-219ENST00000551242 NUP133Q8WUM0 1156 aa13.7□□□□□ -0.22
ERBB3-219ENST00000551242 SHISA4Q96DD7 197 aa13.7□□□□□ -0.22
ERBB3-219ENST00000551242 RNPC3Q96LT9 517 aaKnown RBP13.7□□□□□ -0.22
ERBB3-219ENST00000551242 DNAJC7Q99615 494 aa13.7□□□□□ -0.22
ERBB3-219ENST00000551242 KIF1CO43896 1103 aaKnown RBP13.69□□□□□ -0.22
ERBB3-219ENST00000551242 ECM2O94769 699 aaPredicted RBP13.69□□□□□ -0.22
ERBB3-219ENST00000551242 RDXP35241 583 aaKnown RBP13.69□□□□□ -0.22
ERBB3-219ENST00000551242 MCAMP43121 646 aa13.69□□□□□ -0.22
ERBB3-219ENST00000551242 SKOR1P84550 965 aa13.69□□□□□ -0.22
ERBB3-219ENST00000551242 NNTQ13423 1086 aa13.69□□□□□ -0.22
ERBB3-219ENST00000551242 ZNF174Q15697 407 aa13.69□□□□□ -0.22
ERBB3-219ENST00000551242 NAA35Q5VZE5 725 aa13.69□□□□□ -0.22
ERBB3-219ENST00000551242 PROSER2Q86WR7 435 aaPredicted RBP13.69□□□□□ -0.22
ERBB3-219ENST00000551242 IRF2BP1Q8IU81 584 aa13.69□□□□□ -0.22
ERBB3-219ENST00000551242 DDX17Q92841 729 aaKnown RBP13.69□□□□□ -0.22
ERBB3-219ENST00000551242 ZIM3Q96PE6 472 aa13.69□□□□□ -0.22
ERBB3-219ENST00000551242 ZBTB3Q9H5J0 574 aa13.69□□□□□ -0.22
ERBB3-219ENST00000551242 RWDD2AQ9UIY3 292 aa13.69□□□□□ -0.22
ERBB3-219ENST00000551242 HSF2BPO75031 334 aa13.69□□□□□ -0.22
ERBB3-219ENST00000551242 LSP1P33241 339 aa13.69□□□□□ -0.22
ERBB3-219ENST00000551242 KRT83P78385 493 aa13.69□□□□□ -0.22
ERBB3-219ENST00000551242 SPAG1Q07617 926 aa13.69□□□□□ -0.22
ERBB3-219ENST00000551242 DDR1Q08345 913 aa13.69□□□□□ -0.22
ERBB3-219ENST00000551242 GPIHBP1Q8IV16 184 aa13.69□□□□□ -0.22
ERBB3-219ENST00000551242 MB21D1Q8N884 522 aa13.69□□□□□ -0.22
ERBB3-219ENST00000551242 KCNH5Q8NCM2 988 aa13.69□□□□□ -0.22
ERBB3-219ENST00000551242 MTRQ99707 1265 aa13.69□□□□□ -0.22
ERBB3-219ENST00000551242 GCP02774 474 aa13.68□□□□□ -0.22
ERBB3-219ENST00000551242 PARP1P09874 1014 aaKnown RBP13.68□□□□□ -0.22
ERBB3-219ENST00000551242 ADD2P35612 726 aa13.68□□□□□ -0.22
ERBB3-219ENST00000551242 KLK7P49862 253 aa13.68□□□□□ -0.22
ERBB3-219ENST00000551242 NAP1L1P55209 391 aaKnown RBP13.68□□□□□ -0.22
ERBB3-219ENST00000551242 KRT26Q7Z3Y9 468 aa13.68□□□□□ -0.22
ERBB3-219ENST00000551242 CRACR2BQ8N4Y2 399 aaPredicted RBP13.68□□□□□ -0.22
ERBB3-219ENST00000551242 EHBP1Q8NDI1 1231 aa13.68□□□□□ -0.22
ERBB3-219ENST00000551242 SPATA4Q8NEY3 305 aa13.68□□□□□ -0.22
ERBB3-219ENST00000551242 TBC1D2BQ9UPU7 963 aa13.68□□□□□ -0.22
ERBB3-219ENST00000551242 SIPA1L3O60292 1781 aaPredicted RBP13.68□□□□□ -0.22
ERBB3-219ENST00000551242 CHUKO15111 745 aa13.68□□□□□ -0.22
ERBB3-219ENST00000551242 CIAO1O76071 339 aa13.68□□□□□ -0.22
ERBB3-219ENST00000551242 IFT88Q13099 833 aa13.68□□□□□ -0.22
ERBB3-219ENST00000551242 IQCEQ6IPM2 695 aa13.68□□□□□ -0.22
ERBB3-219ENST00000551242 N4BP2L2Q92802 583 aaPredicted RBP13.68□□□□□ -0.22
ERBB3-219ENST00000551242 NHEJ1Q9H9Q4 299 aaPredicted RBP13.68□□□□□ -0.22
ERBB3-219ENST00000551242 A1CFQ9NQ94 594 aaKnown RBP13.68□□□□□ -0.22
ERBB3-219ENST00000551242 KLC4Q9NSK0 619 aa13.68□□□□□ -0.22
ERBB3-219ENST00000551242 MYH10P35580 1976 aa13.67□□□□□ -0.22
ERBB3-219ENST00000551242 PRDM1O75626 825 aa13.67□□□□□ -0.22
ERBB3-219ENST00000551242 ELF1P32519 619 aa13.67□□□□□ -0.22
ERBB3-219ENST00000551242 LIFRP42702 1097 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms