RNA–Protein interactions for RNA: ENST00000550828.1

ERBB3-215, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 266 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-215ENST00000550828 SLC35G1Q2M3R5 365 aa15.81■□□□□ 0.12
ERBB3-215ENST00000550828 PPP4R3BQ5MIZ7 849 aa15.81■□□□□ 0.12
ERBB3-215ENST00000550828 SLFN13Q68D06 897 aa15.81■□□□□ 0.12
ERBB3-215ENST00000550828 NOL8Q76FK4 1167 aaKnown RBP15.81■□□□□ 0.12
ERBB3-215ENST00000550828 PTPN18Q99952 460 aa15.81■□□□□ 0.12
ERBB3-215ENST00000550828 MCOLN1Q9GZU1 580 aa15.81■□□□□ 0.12
ERBB3-215ENST00000550828 CASP8AP2Q9UKL3 1982 aa15.81■□□□□ 0.12
ERBB3-215ENST00000550828 FRMPD2Q68DX3 1309 aaPredicted RBP15.8■□□□□ 0.12
ERBB3-215ENST00000550828 CCL15-CCL14A0A0B4J2E2 113 aa15.8■□□□□ 0.12
ERBB3-215ENST00000550828 TESPA1A2RU30 521 aaPredicted RBP15.8■□□□□ 0.12
ERBB3-215ENST00000550828 C19orf81C9J6K1 198 aa15.8■□□□□ 0.12
ERBB3-215ENST00000550828 CCL15Q16663 113 aa15.8■□□□□ 0.12
ERBB3-215ENST00000550828 FAM83BQ5T0W9 1011 aa15.8■□□□□ 0.12
ERBB3-215ENST00000550828 NFXL1Q6ZNB6 911 aa15.8■□□□□ 0.12
ERBB3-215ENST00000550828 GADL1Q6ZQY3 521 aa15.8■□□□□ 0.12
ERBB3-215ENST00000550828 STAG2Q8N3U4 1231 aa15.8■□□□□ 0.12
ERBB3-215ENST00000550828 CCDC102AQ96A19 550 aa15.8■□□□□ 0.12
ERBB3-215ENST00000550828 GMCL1Q96IK5 515 aa15.8■□□□□ 0.12
ERBB3-215ENST00000550828 SH2D4AQ9H788 454 aa15.8■□□□□ 0.12
ERBB3-215ENST00000550828 GOPCQ9HD26 462 aa15.8■□□□□ 0.12
ERBB3-215ENST00000550828 FAM217BQ9NTX9 383 aaPredicted RBP15.8■□□□□ 0.12
ERBB3-215ENST00000550828 CCDC69A6NI79 296 aa15.79■□□□□ 0.12
ERBB3-215ENST00000550828 GOLGA8BA8MQT2 603 aa15.79■□□□□ 0.12
ERBB3-215ENST00000550828 BTBD19C9JJ37 291 aa15.79■□□□□ 0.12
ERBB3-215ENST00000550828 DDAH1O94760 285 aa15.79■□□□□ 0.12
ERBB3-215ENST00000550828 PDIA3P30101 505 aaKnown RBP15.79■□□□□ 0.12
ERBB3-215ENST00000550828 GTF2A2P52657 109 aa15.79■□□□□ 0.12
ERBB3-215ENST00000550828 FGD1P98174 961 aa15.79■□□□□ 0.12
ERBB3-215ENST00000550828 ZNF543Q08ER8 600 aa15.79■□□□□ 0.12
ERBB3-215ENST00000550828 GRM4Q14833 912 aa15.79■□□□□ 0.12
ERBB3-215ENST00000550828 TTBK2Q6IQ55 1244 aa15.79■□□□□ 0.12
ERBB3-215ENST00000550828 MICU3Q86XE3 530 aa15.79■□□□□ 0.12
ERBB3-215ENST00000550828 CCDC144CPQ8IYA2 1237 aa15.79■□□□□ 0.12
ERBB3-215ENST00000550828 LPAR1Q92633 364 aa15.79■□□□□ 0.12
ERBB3-215ENST00000550828 CPVLQ9H3G5 476 aa15.79■□□□□ 0.12
ERBB3-215ENST00000550828 FBXO28Q9NVF7 368 aa15.79■□□□□ 0.12
ERBB3-215ENST00000550828 MAD2L2Q9UI95 211 aa15.79■□□□□ 0.12
ERBB3-215ENST00000550828 PALM3A6NDB9 673 aaPredicted RBP15.78■□□□□ 0.12
ERBB3-215ENST00000550828 IGF2BP3O00425 579 aaKnown RBP eCLIP15.78■□□□□ 0.12
ERBB3-215ENST00000550828 RAD21O60216 631 aa15.78■□□□□ 0.12
ERBB3-215ENST00000550828 GOLGA8HP0CJ92 632 aa15.78■□□□□ 0.12
ERBB3-215ENST00000550828 CDC27P30260 824 aa15.78■□□□□ 0.12
ERBB3-215ENST00000550828 USP14P54578 494 aa15.78■□□□□ 0.12
ERBB3-215ENST00000550828 KIF23Q02241 960 aaPredicted RBP15.78■□□□□ 0.12
ERBB3-215ENST00000550828 ME3Q16798 604 aa15.78■□□□□ 0.12
ERBB3-215ENST00000550828 POTEEQ6S8J3 1075 aa15.78■□□□□ 0.12
ERBB3-215ENST00000550828 KCTD1Q719H9 257 aa15.78■□□□□ 0.12
ERBB3-215ENST00000550828 CATIPQ7Z7H3 387 aa15.78■□□□□ 0.12
ERBB3-215ENST00000550828 NBPF11Q86T75 865 aa15.78■□□□□ 0.12
ERBB3-215ENST00000550828 FAM43AQ8N2R8 423 aa15.78■□□□□ 0.12
ERBB3-215ENST00000550828 TMTC2Q8N394 836 aa15.78■□□□□ 0.12
ERBB3-215ENST00000550828 PROCA1Q8NCQ7 364 aaPredicted RBP15.78■□□□□ 0.12
ERBB3-215ENST00000550828 NUP133Q8WUM0 1156 aa15.78■□□□□ 0.12
ERBB3-215ENST00000550828 DCAF4Q8WV16 495 aa15.78■□□□□ 0.12
ERBB3-215ENST00000550828 RPAP3Q9H6T3 665 aaPredicted RBP15.78■□□□□ 0.12
ERBB3-215ENST00000550828 TSHZ2Q9NRE2 1034 aa15.78■□□□□ 0.12
ERBB3-215ENST00000550828 TSKSQ9UJT2 592 aa15.78■□□□□ 0.12
ERBB3-215ENST00000550828 AGTPBP1Q9UPW5 1226 aa15.78■□□□□ 0.12
ERBB3-215ENST00000550828 SLC12A7Q9Y666 1083 aa15.78■□□□□ 0.12
ERBB3-215ENST00000550828 WDR46O15213 610 aaKnown RBP15.77■□□□□ 0.12
ERBB3-215ENST00000550828 ZBTB43O43298 467 aa15.77■□□□□ 0.12
ERBB3-215ENST00000550828 DTNBO60941 627 aa15.77■□□□□ 0.12
ERBB3-215ENST00000550828 PLEKHA8P1O95397 391 aa15.77■□□□□ 0.12
ERBB3-215ENST00000550828 CETPP11597 493 aa15.77■□□□□ 0.12
ERBB3-215ENST00000550828 BMP3P12645 472 aa15.77■□□□□ 0.12
ERBB3-215ENST00000550828 CCDC96Q2M329 555 aa15.77■□□□□ 0.12
ERBB3-215ENST00000550828 NECAB1Q8N987 351 aa15.77■□□□□ 0.12
ERBB3-215ENST00000550828 NCOA5Q9HCD5 579 aaKnown RBP15.77■□□□□ 0.12
ERBB3-215ENST00000550828 GPCPD1Q9NPB8 672 aa15.77■□□□□ 0.12
ERBB3-215ENST00000550828 TMOD4Q9NZQ9 345 aa15.77■□□□□ 0.12
ERBB3-215ENST00000550828 ZSWIM8A7E2V4 1837 aa15.76■□□□□ 0.11
ERBB3-215ENST00000550828 PDE4DIPQ5VU43 2346 aa15.76■□□□□ 0.11
ERBB3-215ENST00000550828 MANSC4A6NHS7 340 aaPredicted RBP15.76■□□□□ 0.11
ERBB3-215ENST00000550828 GOLGA8AA7E2F4 631 aa15.76■□□□□ 0.11
ERBB3-215ENST00000550828 SLC1A4P43007 532 aa15.76■□□□□ 0.11
ERBB3-215ENST00000550828 FUT2Q10981 343 aa15.76■□□□□ 0.11
ERBB3-215ENST00000550828 STK3Q13188 491 aa15.76■□□□□ 0.11
ERBB3-215ENST00000550828 NOGQ13253 232 aa15.76■□□□□ 0.11
ERBB3-215ENST00000550828 ZNF274Q96GC6 653 aaPredicted RBP15.76■□□□□ 0.11
ERBB3-215ENST00000550828 MAP3K14Q99558 947 aa15.76■□□□□ 0.11
ERBB3-215ENST00000550828 NAP1L2Q9ULW6 460 aaPredicted RBP15.76■□□□□ 0.11
ERBB3-215ENST00000550828 CYTH3O43739 400 aa15.75■□□□□ 0.11
ERBB3-215ENST00000550828 ST18O60284 1047 aa15.75■□□□□ 0.11
ERBB3-215ENST00000550828 PFKFB2O60825 505 aa15.75■□□□□ 0.11
ERBB3-215ENST00000550828 PARP1P09874 1014 aaKnown RBP15.75■□□□□ 0.11
ERBB3-215ENST00000550828 HOXA7P31268 230 aaPredicted RBP15.75■□□□□ 0.11
ERBB3-215ENST00000550828 SLC16A2P36021 539 aa15.75■□□□□ 0.11
ERBB3-215ENST00000550828 RCAN1P53805 252 aa15.75■□□□□ 0.11
ERBB3-215ENST00000550828 CCT2P78371 535 aaKnown RBP15.75■□□□□ 0.11
ERBB3-215ENST00000550828 SCRN1Q12765 414 aa15.75■□□□□ 0.11
ERBB3-215ENST00000550828 ANKRD1Q15327 319 aa15.75■□□□□ 0.11
ERBB3-215ENST00000550828 RTN1Q16799 776 aa15.75■□□□□ 0.11
ERBB3-215ENST00000550828 ASPRV1Q53RT3 343 aa15.75■□□□□ 0.11
ERBB3-215ENST00000550828 CATSPERGQ6ZRH7 1159 aa15.75■□□□□ 0.11
ERBB3-215ENST00000550828 FASTKD5Q7L8L6 764 aaKnown RBP15.75■□□□□ 0.11
ERBB3-215ENST00000550828 ANKRD23Q86SG2 305 aa15.75■□□□□ 0.11
ERBB3-215ENST00000550828 CMTR1Q8N1G2 835 aaKnown RBP15.75■□□□□ 0.11
ERBB3-215ENST00000550828 FANCBQ8NB91 859 aa15.75■□□□□ 0.11
ERBB3-215ENST00000550828 UBA5Q9GZZ9 404 aa15.75■□□□□ 0.11
ERBB3-215ENST00000550828 ASCC2Q9H1I8 757 aaPredicted RBP15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms