RNA–Protein interactions for RNA: ENST00000550647.5

RAB3IP-213, Transcript of RAB3A interacting protein, humanhuman

TSL 3

Gene RAB3IP, Length 742 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-213ENST00000550647 NSMFQ6X4W1 530 aa7.14□□□□□ -1.27
RAB3IP-213ENST00000550647 NOL8Q76FK4 1167 aaKnown RBP7.14□□□□□ -1.27
RAB3IP-213ENST00000550647 DYMQ7RTS9 669 aa7.14□□□□□ -1.27
RAB3IP-213ENST00000550647 JAMLQ86YT9 394 aa7.14□□□□□ -1.27
RAB3IP-213ENST00000550647 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.14□□□□□ -1.27
RAB3IP-213ENST00000550647 AFAP1L2Q8N4X5 818 aa7.14□□□□□ -1.27
RAB3IP-213ENST00000550647 PSMG3-AS1Q96PY0 264 aa7.14□□□□□ -1.27
RAB3IP-213ENST00000550647 TRIM39Q9HCM9 518 aa7.14□□□□□ -1.27
RAB3IP-213ENST00000550647 MCM8Q9UJA3 840 aa7.14□□□□□ -1.27
RAB3IP-213ENST00000550647 F8W735 103 aaPredicted RBP7.13□□□□□ -1.27
RAB3IP-213ENST00000550647 EFCAB14O75071 495 aa7.13□□□□□ -1.27
RAB3IP-213ENST00000550647 SCG5P05408 212 aa7.13□□□□□ -1.27
RAB3IP-213ENST00000550647 DRD2P14416 443 aa7.13□□□□□ -1.27
RAB3IP-213ENST00000550647 CNGA1P29973 690 aa7.13□□□□□ -1.27
RAB3IP-213ENST00000550647 ETV3P41162 512 aa7.13□□□□□ -1.27
RAB3IP-213ENST00000550647 GABREP78334 506 aa7.13□□□□□ -1.27
RAB3IP-213ENST00000550647 MAP4K2Q12851 820 aa7.13□□□□□ -1.27
RAB3IP-213ENST00000550647 GRB10Q13322 594 aa7.13□□□□□ -1.27
RAB3IP-213ENST00000550647 FERMT3Q86UX7 667 aa7.13□□□□□ -1.27
RAB3IP-213ENST00000550647 LRRTM3Q86VH5 581 aa7.13□□□□□ -1.27
RAB3IP-213ENST00000550647 PPM1KQ8N3J5 372 aa7.13□□□□□ -1.27
RAB3IP-213ENST00000550647 FGD4Q96M96 766 aa7.13□□□□□ -1.27
RAB3IP-213ENST00000550647 CCDC140Q96MF4 163 aa7.13□□□□□ -1.27
RAB3IP-213ENST00000550647 IER2Q9BTL4 223 aa7.13□□□□□ -1.27
RAB3IP-213ENST00000550647 MKRN2Q9H000 416 aaKnown RBP7.13□□□□□ -1.27
RAB3IP-213ENST00000550647 FHOD1Q9Y613 1164 aa7.13□□□□□ -1.27
RAB3IP-213ENST00000550647 FAM83GA6ND36 823 aa7.12□□□□□ -1.27
RAB3IP-213ENST00000550647 NOP56O00567 594 aaKnown RBP7.12□□□□□ -1.27
RAB3IP-213ENST00000550647 GNB5O14775 395 aa7.12□□□□□ -1.27
RAB3IP-213ENST00000550647 PRODHO43272 600 aa7.12□□□□□ -1.27
RAB3IP-213ENST00000550647 RNGTTO60942 597 aaKnown RBP7.12□□□□□ -1.27
RAB3IP-213ENST00000550647 GRIA2P42262 883 aa7.12□□□□□ -1.27
RAB3IP-213ENST00000550647 TRIM28Q13263 835 aaKnown RBP7.12□□□□□ -1.27
RAB3IP-213ENST00000550647 LETMD1Q6P1Q0 360 aa7.12□□□□□ -1.27
RAB3IP-213ENST00000550647 DDX42Q86XP3 938 aaKnown RBP eCLIP7.12□□□□□ -1.27
RAB3IP-213ENST00000550647 C12orf50Q8NA57 414 aaPredicted RBP7.12□□□□□ -1.27
RAB3IP-213ENST00000550647 SYTL5Q8TDW5 730 aaPredicted RBP7.12□□□□□ -1.27
RAB3IP-213ENST00000550647 DDX1Q92499 740 aaKnown RBP7.12□□□□□ -1.27
RAB3IP-213ENST00000550647 EZH1Q92800 747 aaPredicted RBP7.12□□□□□ -1.27
RAB3IP-213ENST00000550647 COX4I2Q96KJ9 171 aa7.12□□□□□ -1.27
RAB3IP-213ENST00000550647 TARS2Q9BW92 718 aaKnown RBP7.12□□□□□ -1.27
RAB3IP-213ENST00000550647 FAM126AQ9BYI3 521 aaPredicted RBP7.12□□□□□ -1.27
RAB3IP-213ENST00000550647 ENAMQ9NRM1 1142 aa7.12□□□□□ -1.27
RAB3IP-213ENST00000550647 FAM86C1Q9NVL1 165 aa7.12□□□□□ -1.27
RAB3IP-213ENST00000550647 CHPF2Q9P2E5 772 aa7.12□□□□□ -1.27
RAB3IP-213ENST00000550647 CGGBP1Q9UFW8 167 aaPredicted RBP7.12□□□□□ -1.27
RAB3IP-213ENST00000550647 SFMBT1Q9UHJ3 866 aa7.12□□□□□ -1.27
RAB3IP-213ENST00000550647 DIS3Q9Y2L1 958 aaKnown RBP7.12□□□□□ -1.27
RAB3IP-213ENST00000550647 TBX1O43435 398 aa7.11□□□□□ -1.27
RAB3IP-213ENST00000550647 DLX3O60479 287 aa7.11□□□□□ -1.27
RAB3IP-213ENST00000550647 DNAJC8O75937 253 aaPredicted RBP7.11□□□□□ -1.27
RAB3IP-213ENST00000550647 SDSP20132 328 aa7.11□□□□□ -1.27
RAB3IP-213ENST00000550647 NBPF9Q3BBW0 867 aa7.11□□□□□ -1.27
RAB3IP-213ENST00000550647 AHI1Q8N157 1196 aa7.11□□□□□ -1.27
RAB3IP-213ENST00000550647 WHAMMQ8TF30 809 aa7.11□□□□□ -1.27
RAB3IP-213ENST00000550647 ZNF512BQ96KM6 892 aaPredicted RBP7.11□□□□□ -1.27
RAB3IP-213ENST00000550647 PLVAPQ9BX97 442 aa7.11□□□□□ -1.27
RAB3IP-213ENST00000550647 CEP41Q9BYV8 373 aa7.11□□□□□ -1.27
RAB3IP-213ENST00000550647 SSU72Q9NP77 194 aaKnown RBP7.11□□□□□ -1.27
RAB3IP-213ENST00000550647 SUGT1Q9Y2Z0 365 aa7.11□□□□□ -1.27
RAB3IP-213ENST00000550647 PCDHB12Q9Y5F1 795 aa7.11□□□□□ -1.27
RAB3IP-213ENST00000550647 SLITRK5O94991 958 aa7.1□□□□□ -1.27
RAB3IP-213ENST00000550647 EYA4O95677 639 aa7.1□□□□□ -1.27
RAB3IP-213ENST00000550647 LORP23490 312 aaPredicted RBP7.1□□□□□ -1.27
RAB3IP-213ENST00000550647 HOXC12P31275 282 aa7.1□□□□□ -1.27
RAB3IP-213ENST00000550647 PREPP48147 710 aa7.1□□□□□ -1.27
RAB3IP-213ENST00000550647 GFRA1P56159 465 aa7.1□□□□□ -1.27
RAB3IP-213ENST00000550647 ZNF445P59923 1031 aa7.1□□□□□ -1.27
RAB3IP-213ENST00000550647 NFKB2Q00653 900 aa7.1□□□□□ -1.27
RAB3IP-213ENST00000550647 ZNF385CQ66K41 422 aaPredicted RBP7.1□□□□□ -1.27
RAB3IP-213ENST00000550647 SEZ6L2Q6UXD5 910 aa7.1□□□□□ -1.27
RAB3IP-213ENST00000550647 MAMDC2Q7Z304 686 aaPredicted RBP7.1□□□□□ -1.27
RAB3IP-213ENST00000550647 ADAT2Q7Z6V5 191 aaKnown RBP7.1□□□□□ -1.27
RAB3IP-213ENST00000550647 SLC7A14Q8TBB6 771 aa7.1□□□□□ -1.27
RAB3IP-213ENST00000550647 CEP89Q96ST8 783 aa7.1□□□□□ -1.27
RAB3IP-213ENST00000550647 NKX2-4Q9H2Z4 354 aa7.1□□□□□ -1.27
RAB3IP-213ENST00000550647 AKT3Q9Y243 479 aa7.1□□□□□ -1.27
RAB3IP-213ENST00000550647 ARHGEF15O94989 841 aa7.09□□□□□ -1.27
RAB3IP-213ENST00000550647 ASLP04424 464 aa7.09□□□□□ -1.27
RAB3IP-213ENST00000550647 UVSSAQ2YD98 709 aa7.09□□□□□ -1.27
RAB3IP-213ENST00000550647 BRDTQ58F21 947 aaPredicted RBP7.09□□□□□ -1.27
RAB3IP-213ENST00000550647 HSP90AB2PQ58FF8 381 aa7.09□□□□□ -1.27
RAB3IP-213ENST00000550647 CT47A1Q5JQC4 288 aaPredicted RBP7.09□□□□□ -1.27
RAB3IP-213ENST00000550647 ODR4Q5SWX8 454 aa7.09□□□□□ -1.27
RAB3IP-213ENST00000550647 XAGE3Q8WTP9 111 aa7.09□□□□□ -1.27
RAB3IP-213ENST00000550647 KCTD13Q8WZ19 329 aa7.09□□□□□ -1.27
RAB3IP-213ENST00000550647 PTPRN2Q92932 1015 aa7.09□□□□□ -1.27
RAB3IP-213ENST00000550647 C1orf159Q96HA4 380 aa7.09□□□□□ -1.27
RAB3IP-213ENST00000550647 FAM46AQ96IP4 442 aaKnown RBP7.09□□□□□ -1.27
RAB3IP-213ENST00000550647 MIPEPQ99797 713 aa7.09□□□□□ -1.27
RAB3IP-213ENST00000550647 ORAI3Q9BRQ5 295 aa7.09□□□□□ -1.27
RAB3IP-213ENST00000550647 YIPF2Q9BWQ6 316 aa7.09□□□□□ -1.27
RAB3IP-213ENST00000550647 SEMA6CQ9H3T2 930 aa7.09□□□□□ -1.27
RAB3IP-213ENST00000550647 RRAGCQ9HB90 399 aa7.09□□□□□ -1.27
RAB3IP-213ENST00000550647 FAN1Q9Y2M0 1017 aa7.09□□□□□ -1.27
RAB3IP-213ENST00000550647 CPP00450 1065 aa7.08□□□□□ -1.28
RAB3IP-213ENST00000550647 CPEP16870 476 aa7.08□□□□□ -1.28
RAB3IP-213ENST00000550647 DHCR24Q15392 516 aa7.08□□□□□ -1.28
RAB3IP-213ENST00000550647 SLC35F1Q5T1Q4 408 aa7.08□□□□□ -1.28
RAB3IP-213ENST00000550647 GTF2IRD2BQ6EKJ0 949 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms