RNA–Protein interactions for RNA: ENST00000550436.4

SVOP-203, Transcript of SV2 related protein, humanhuman

TSL 4

Gene SVOP, Length 695 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVOP-203ENST00000550436 FBXO28Q9NVF7 368 aa18.21■□□□□ 0.51
SVOP-203ENST00000550436 EYSQ5T1H1 3165 aa18.21■□□□□ 0.51
SVOP-203ENST00000550436 MYO9BQ13459 2157 aa18.2■□□□□ 0.5
SVOP-203ENST00000550436 GOLIM4O00461 696 aa18.2■□□□□ 0.5
SVOP-203ENST00000550436 PGK1P00558 417 aa18.2■□□□□ 0.5
SVOP-203ENST00000550436 TMEM132BQ14DG7 1078 aa18.2■□□□□ 0.5
SVOP-203ENST00000550436 DNAJC2Q99543 621 aaKnown RBP18.2■□□□□ 0.5
SVOP-203ENST00000550436 PRUNE2Q8WUY3 3088 aa18.2■□□□□ 0.5
SVOP-203ENST00000550436 TMEM179Q6ZVK1 233 aa18.19■□□□□ 0.5
SVOP-203ENST00000550436 RHPN1Q8TCX5 695 aa18.19■□□□□ 0.5
SVOP-203ENST00000550436 MROH8Q9H579 483 aa18.19■□□□□ 0.5
SVOP-203ENST00000550436 DDX19BQ9UMR2 479 aa18.19■□□□□ 0.5
SVOP-203ENST00000550436 TMX2Q9Y320 296 aa18.19■□□□□ 0.5
SVOP-203ENST00000550436 VCANP13611 3396 aa18.19■□□□□ 0.5
SVOP-203ENST00000550436 ICA1Q05084 483 aa18.18■□□□□ 0.5
SVOP-203ENST00000550436 VCPKMTQ9H867 229 aa18.18■□□□□ 0.5
SVOP-203ENST00000550436 XPNPEP3Q9NQH7 507 aa18.18■□□□□ 0.5
SVOP-203ENST00000550436 PHF24Q9UPV7 400 aa18.18■□□□□ 0.5
SVOP-203ENST00000550436 FCER1AP12319 257 aa18.17■□□□□ 0.5
SVOP-203ENST00000550436 IRX5P78411 483 aaPredicted RBP18.17■□□□□ 0.5
SVOP-203ENST00000550436 SMAD3P84022 425 aaKnown RBP18.17■□□□□ 0.5
SVOP-203ENST00000550436 ABRAQ8N0Z2 381 aa18.17■□□□□ 0.5
SVOP-203ENST00000550436 MB21D1Q8N884 522 aa18.17■□□□□ 0.5
SVOP-203ENST00000550436 ZBTB40Q9NUA8 1239 aa18.17■□□□□ 0.5
SVOP-203ENST00000550436 PQBP1O60828 265 aaKnown RBP18.16■□□□□ 0.5
SVOP-203ENST00000550436 MBD4O95243 580 aa18.16■□□□□ 0.5
SVOP-203ENST00000550436 EEF2P13639 858 aaKnown RBP18.16■□□□□ 0.5
SVOP-203ENST00000550436 CDK8P49336 464 aa18.16■□□□□ 0.5
SVOP-203ENST00000550436 TTF1Q15361 905 aaPredicted RBP18.16■□□□□ 0.5
SVOP-203ENST00000550436 ERC1Q8IUD2 1116 aa18.16■□□□□ 0.5
SVOP-203ENST00000550436 MMP19Q99542 508 aa18.16■□□□□ 0.5
SVOP-203ENST00000550436 ARHGEF10LQ9HCE6 1279 aa18.16■□□□□ 0.5
SVOP-203ENST00000550436 SLC5A4Q9NY91 659 aa18.16■□□□□ 0.5
SVOP-203ENST00000550436 CDH23Q9H251 3354 aa18.15■□□□□ 0.5
SVOP-203ENST00000550436 CLTBP09497 229 aa18.15■□□□□ 0.5
SVOP-203ENST00000550436 ZNF865P0CJ78 1059 aaPredicted RBP18.15■□□□□ 0.5
SVOP-203ENST00000550436 RARBP10826 455 aa18.15■□□□□ 0.5
SVOP-203ENST00000550436 ZNF792Q3KQV3 632 aa18.15■□□□□ 0.5
SVOP-203ENST00000550436 C1orf53Q5VUE5 145 aa18.15■□□□□ 0.5
SVOP-203ENST00000550436 TMED8Q6PL24 325 aaPredicted RBP18.15■□□□□ 0.5
SVOP-203ENST00000550436 RNPC3Q96LT9 517 aaKnown RBP18.15■□□□□ 0.5
SVOP-203ENST00000550436 TINF2Q9BSI4 451 aa18.15■□□□□ 0.5
SVOP-203ENST00000550436 SWAP70Q9UH65 585 aa18.15■□□□□ 0.5
SVOP-203ENST00000550436 ADAMTS5Q9UNA0 930 aa18.15■□□□□ 0.5
SVOP-203ENST00000550436 SPTBN5Q9NRC6 3674 aaKnown RBP18.14■□□□□ 0.5
SVOP-203ENST00000550436 MCM3APO60318 1980 aa18.14■□□□□ 0.49
SVOP-203ENST00000550436 A0A1W2PQ45 241 aaPredicted RBP18.14■□□□□ 0.49
SVOP-203ENST00000550436 A0A1W2PQY0 241 aa18.14■□□□□ 0.49
SVOP-203ENST00000550436 USP17L12C9JPN9 530 aa18.14■□□□□ 0.49
SVOP-203ENST00000550436 USP17L21D6R901 530 aa18.14■□□□□ 0.49
SVOP-203ENST00000550436 WDR46O15213 610 aaKnown RBP18.14■□□□□ 0.49
SVOP-203ENST00000550436 FOSL2P15408 326 aa18.14■□□□□ 0.49
SVOP-203ENST00000550436 C12orf60Q5U649 245 aa18.14■□□□□ 0.49
SVOP-203ENST00000550436 RIOX2Q8IUF8 465 aa18.14■□□□□ 0.49
SVOP-203ENST00000550436 USP38Q8NB14 1042 aa18.14■□□□□ 0.49
SVOP-203ENST00000550436 REPS2Q8NFH8 660 aa18.14■□□□□ 0.49
SVOP-203ENST00000550436 BOLA2Q9H3K6 86 aa18.14■□□□□ 0.49
SVOP-203ENST00000550436 TACC3Q9Y6A5 838 aa18.14■□□□□ 0.49
SVOP-203ENST00000550436 KIAA0355O15063 1070 aa18.13■□□□□ 0.49
SVOP-203ENST00000550436 RAD21O60216 631 aa18.13■□□□□ 0.49
SVOP-203ENST00000550436 ADD2P35612 726 aa18.13■□□□□ 0.49
SVOP-203ENST00000550436 STAT3P40763 770 aa18.13■□□□□ 0.49
SVOP-203ENST00000550436 GRIN2CQ14957 1233 aa18.13■□□□□ 0.49
SVOP-203ENST00000550436 FAM83BQ5T0W9 1011 aa18.13■□□□□ 0.49
SVOP-203ENST00000550436 SIRT2Q8IXJ6 389 aa18.13■□□□□ 0.49
SVOP-203ENST00000550436 NUP88Q99567 741 aaPredicted RBP18.13■□□□□ 0.49
SVOP-203ENST00000550436 ZNF214Q9UL59 606 aaPredicted RBP18.13■□□□□ 0.49
SVOP-203ENST00000550436 MYADML2A6NDP7 307 aa18.12■□□□□ 0.49
SVOP-203ENST00000550436 VWA5AO00534 786 aa18.12■□□□□ 0.49
SVOP-203ENST00000550436 ADAMTS4O75173 837 aa18.12■□□□□ 0.49
SVOP-203ENST00000550436 SLC25A27O95847 323 aa18.12■□□□□ 0.49
SVOP-203ENST00000550436 RAG1P15918 1043 aa18.12■□□□□ 0.49
SVOP-203ENST00000550436 FAAP100Q0VG06 881 aa18.12■□□□□ 0.49
SVOP-203ENST00000550436 KCTD2Q14681 263 aa18.12■□□□□ 0.49
SVOP-203ENST00000550436 STK11IPQ8N1F8 1099 aa18.12■□□□□ 0.49
SVOP-203ENST00000550436 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.12■□□□□ 0.49
SVOP-203ENST00000550436 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.12■□□□□ 0.49
SVOP-203ENST00000550436 PRDM6Q9NQX0 595 aa18.12■□□□□ 0.49
SVOP-203ENST00000550436 TMEM39AQ9NV64 488 aa18.12■□□□□ 0.49
SVOP-203ENST00000550436 MYH7P12883 1935 aa18.11■□□□□ 0.49
SVOP-203ENST00000550436 IFIT2P09913 472 aaKnown RBP18.11■□□□□ 0.49
SVOP-203ENST00000550436 RRP1P56182 461 aaKnown RBP18.11■□□□□ 0.49
SVOP-203ENST00000550436 C16orf86Q6ZW13 317 aa18.11■□□□□ 0.49
SVOP-203ENST00000550436 RNF180Q86T96 592 aa18.11■□□□□ 0.49
SVOP-203ENST00000550436 RPAP2Q8IXW5 612 aaPredicted RBP18.11■□□□□ 0.49
SVOP-203ENST00000550436 CLASRPQ8N2M8 674 aaKnown RBP18.11■□□□□ 0.49
SVOP-203ENST00000550436 CCDC17Q96LX7 622 aa18.11■□□□□ 0.49
SVOP-203ENST00000550436 CHMP4BQ9H444 224 aaKnown RBP18.11■□□□□ 0.49
SVOP-203ENST00000550436 SH2D4AQ9H788 454 aa18.11■□□□□ 0.49
SVOP-203ENST00000550436 PAG1Q9NWQ8 432 aa18.11■□□□□ 0.49
SVOP-203ENST00000550436 PPP1R9AQ9ULJ8 1098 aa18.11■□□□□ 0.49
SVOP-203ENST00000550436 RIPK3Q9Y572 518 aa18.11■□□□□ 0.49
SVOP-203ENST00000550436 GRXCR1A8MXD5 290 aa18.1■□□□□ 0.49
SVOP-203ENST00000550436 SNAI1O95863 264 aaPredicted RBP18.1■□□□□ 0.49
SVOP-203ENST00000550436 SLC4A3P48751 1232 aa18.1■□□□□ 0.49
SVOP-203ENST00000550436 ACLYP53396 1101 aa18.1■□□□□ 0.49
SVOP-203ENST00000550436 FPGSQ05932 587 aa18.1■□□□□ 0.49
SVOP-203ENST00000550436 CTR9Q6PD62 1173 aa18.1■□□□□ 0.49
SVOP-203ENST00000550436 KIF1BPQ96EK5 621 aa18.1■□□□□ 0.49
SVOP-203ENST00000550436 ATP8A2Q9NTI2 1148 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms