RNA–Protein interactions for RNA: ENST00000550155.5

CNOT2-222, Transcript of CCR4-NOT transcription complex subunit 2, human

TSL 2

Gene CNOT2, Length 842 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT2-222	ENST00000550155	NSUN3	Q9H649	340 aa	Known RBP	7.83	□□□□□ -1.16
CNOT2-222	ENST00000550155	ANTXR1	Q9H6X2	564 aa		7.83	□□□□□ -1.16
CNOT2-222	ENST00000550155	TNFRSF10C	O14798	259 aa		7.82	□□□□□ -1.16
CNOT2-222	ENST00000550155	RPL10	P27635	214 aa	Known RBP	7.82	□□□□□ -1.16
CNOT2-222	ENST00000550155	TEK	Q02763	1124 aa		7.82	□□□□□ -1.16
CNOT2-222	ENST00000550155	INTS3	Q68E01	1043 aa	Known RBP	7.82	□□□□□ -1.16
CNOT2-222	ENST00000550155	ZNF654	Q8IZM8	581 aa		7.82	□□□□□ -1.16
CNOT2-222	ENST00000550155	ANKS4B	Q8N8V4	417 aa		7.82	□□□□□ -1.16
CNOT2-222	ENST00000550155	FBXO15	Q8NCQ5	510 aa	Predicted RBP	7.82	□□□□□ -1.16
CNOT2-222	ENST00000550155	ZNF512B	Q96KM6	892 aa	Predicted RBP	7.82	□□□□□ -1.16
CNOT2-222	ENST00000550155	SLC6A18	Q96N87	628 aa		7.82	□□□□□ -1.16
CNOT2-222	ENST00000550155	HDAC8	Q9BY41	377 aa		7.82	□□□□□ -1.16
CNOT2-222	ENST00000550155	DCP1A	Q9NPI6	582 aa	Predicted RBP	7.82	□□□□□ -1.16
CNOT2-222	ENST00000550155	ZMYM5	Q9UJ78	669 aa		7.82	□□□□□ -1.16
CNOT2-222	ENST00000550155	FBXL21	Q9UKT6	434 aa		7.82	□□□□□ -1.16
CNOT2-222	ENST00000550155	TRHR	P34981	398 aa	Predicted RBP	7.81	□□□□□ -1.16
CNOT2-222	ENST00000550155	NR0B2	Q15466	257 aa		7.81	□□□□□ -1.16
CNOT2-222	ENST00000550155	TMC3	Q7Z5M5	1100 aa		7.81	□□□□□ -1.16
CNOT2-222	ENST00000550155	TCTN2	Q96GX1	697 aa		7.81	□□□□□ -1.16
CNOT2-222	ENST00000550155	EPB41L4B	Q9H329	900 aa		7.81	□□□□□ -1.16
CNOT2-222	ENST00000550155	C19orf44	Q9H6X5	657 aa		7.81	□□□□□ -1.16
CNOT2-222	ENST00000550155	DDX41	Q9UJV9	622 aa	Known RBP	7.81	□□□□□ -1.16
CNOT2-222	ENST00000550155	TCFL5	Q9UL49	500 aa		7.81	□□□□□ -1.16
CNOT2-222	ENST00000550155	ZNRF3	Q9ULT6	936 aa		7.81	□□□□□ -1.16
CNOT2-222	ENST00000550155	PCDHB12	Q9Y5F1	795 aa		7.81	□□□□□ -1.16
CNOT2-222	ENST00000550155	DBX1	A6NMT0	343 aa		7.8	□□□□□ -1.16
CNOT2-222	ENST00000550155	SIGLEC6	O43699	453 aa		7.8	□□□□□ -1.16
CNOT2-222	ENST00000550155	RAP1GAP	P47736	663 aa		7.8	□□□□□ -1.16
CNOT2-222	ENST00000550155	SNX17	Q15036	470 aa		7.8	□□□□□ -1.16
CNOT2-222	ENST00000550155	SYDE1	Q6ZW31	735 aa	Predicted RBP	7.8	□□□□□ -1.16
CNOT2-222	ENST00000550155	WAPL	Q7Z5K2	1190 aa		7.8	□□□□□ -1.16
CNOT2-222	ENST00000550155	TMEM192	Q8IY95	271 aa		7.8	□□□□□ -1.16
CNOT2-222	ENST00000550155	USHBP1	Q8N6Y0	703 aa		7.8	□□□□□ -1.16
CNOT2-222	ENST00000550155	LINC00116	Q8NCU8	138 aa		7.8	□□□□□ -1.16
CNOT2-222	ENST00000550155	SPATA32	Q96LK8	384 aa		7.8	□□□□□ -1.16
CNOT2-222	ENST00000550155	CRBN	Q96SW2	442 aa		7.8	□□□□□ -1.16
CNOT2-222	ENST00000550155	SLC9A7	Q96T83	725 aa		7.8	□□□□□ -1.16
CNOT2-222	ENST00000550155	TM9SF2	Q99805	663 aa		7.8	□□□□□ -1.16
CNOT2-222	ENST00000550155	FOXP3	Q9BZS1	431 aa		7.8	□□□□□ -1.16
CNOT2-222	ENST00000550155	PRDM14	Q9GZV8	571 aa		7.8	□□□□□ -1.16
CNOT2-222	ENST00000550155	RNF32	Q9H0A6	362 aa		7.8	□□□□□ -1.16
CNOT2-222	ENST00000550155	CWC22	Q9HCG8	908 aa	Known RBP	7.8	□□□□□ -1.16
CNOT2-222	ENST00000550155	PRAMEF1	O95521	474 aa		7.79	□□□□□ -1.16
CNOT2-222	ENST00000550155	SYP	P08247	313 aa		7.79	□□□□□ -1.16
CNOT2-222	ENST00000550155	ENDOU	P21128	410 aa	Known RBP	7.79	□□□□□ -1.16
CNOT2-222	ENST00000550155	COL9A2	Q14055	689 aa	Predicted RBP	7.79	□□□□□ -1.16
CNOT2-222	ENST00000550155	SLC14A2	Q15849	920 aa		7.79	□□□□□ -1.16
CNOT2-222	ENST00000550155	SLC6A17	Q9H1V8	727 aa		7.79	□□□□□ -1.16
CNOT2-222	ENST00000550155	CHST7	Q9NS84	486 aa		7.79	□□□□□ -1.16
CNOT2-222	ENST00000550155	GPR160	Q9UJ42	338 aa		7.79	□□□□□ -1.16
CNOT2-222	ENST00000550155	FAM86C2P	A6NEL3	165 aa		7.78	□□□□□ -1.16
CNOT2-222	ENST00000550155	NFIB	O00712	420 aa		7.78	□□□□□ -1.16
CNOT2-222	ENST00000550155	RECK	O95980	971 aa		7.78	□□□□□ -1.16
CNOT2-222	ENST00000550155	TMEM253	P0C7T8	217 aa		7.78	□□□□□ -1.16
CNOT2-222	ENST00000550155	RACK1	P63244	317 aa	Known RBP	7.78	□□□□□ -1.16
CNOT2-222	ENST00000550155	SNW1	Q13573	536 aa	Known RBP	7.78	□□□□□ -1.16
CNOT2-222	ENST00000550155	AUH	Q13825	339 aa	Known RBP	7.78	□□□□□ -1.16
CNOT2-222	ENST00000550155	CCDC144CP	Q8IYA2	1237 aa		7.78	□□□□□ -1.16
CNOT2-222	ENST00000550155	SUCO	Q9UBS9	1254 aa	Known RBP	7.78	□□□□□ -1.16
CNOT2-222	ENST00000550155	FKTN	O75072	461 aa		7.77	□□□□□ -1.17
CNOT2-222	ENST00000550155	JAG1	P78504	1218 aa		7.77	□□□□□ -1.17
CNOT2-222	ENST00000550155	TRIM26	Q12899	539 aa	Predicted RBP	7.77	□□□□□ -1.17
CNOT2-222	ENST00000550155	TAB3	Q8N5C8	712 aa	Predicted RBP	7.77	□□□□□ -1.17
CNOT2-222	ENST00000550155	LINC01599	Q8WXQ3	324 aa		7.77	□□□□□ -1.17
CNOT2-222	ENST00000550155	MRRF	Q96E11	262 aa	Known RBP	7.77	□□□□□ -1.17
CNOT2-222	ENST00000550155	MEIS1	O00470	390 aa		7.76	□□□□□ -1.17
CNOT2-222	ENST00000550155	TSPAN15	O95858	294 aa		7.76	□□□□□ -1.17
CNOT2-222	ENST00000550155	PDE6B	P35913	854 aa		7.76	□□□□□ -1.17
CNOT2-222	ENST00000550155	PAK2	Q13177	524 aa		7.76	□□□□□ -1.17
CNOT2-222	ENST00000550155	ANKLE2	Q86XL3	938 aa		7.76	□□□□□ -1.17
CNOT2-222	ENST00000550155	IRF2BP1	Q8IU81	584 aa		7.76	□□□□□ -1.17
CNOT2-222	ENST00000550155	SMARCC1	Q92922	1105 aa	Predicted RBP	7.76	□□□□□ -1.17
CNOT2-222	ENST00000550155	SLC26A8	Q96RN1	970 aa		7.76	□□□□□ -1.17
CNOT2-222	ENST00000550155	DSCC1	Q9BVC3	393 aa		7.76	□□□□□ -1.17
CNOT2-222	ENST00000550155	SP110	Q9HB58	689 aa		7.76	□□□□□ -1.17
CNOT2-222	ENST00000550155	GFOD1	Q9NXC2	390 aa		7.76	□□□□□ -1.17
CNOT2-222	ENST00000550155	PRR13	Q9NZ81	148 aa		7.76	□□□□□ -1.17
CNOT2-222	ENST00000550155	PPT2	Q9UMR5	302 aa		7.76	□□□□□ -1.17
CNOT2-222	ENST00000550155	YBX2	Q9Y2T7	364 aa	Known RBP	7.76	□□□□□ -1.17
CNOT2-222	ENST00000550155	ZNF281	Q9Y2X9	895 aa		7.76	□□□□□ -1.17
CNOT2-222	ENST00000550155	KIR2DL1	P43626	348 aa	Predicted RBP	7.75	□□□□□ -1.17
CNOT2-222	ENST00000550155	KIR2DL2	P43627	348 aa	Predicted RBP	7.75	□□□□□ -1.17
CNOT2-222	ENST00000550155	PMS1	P54277	932 aa	Known RBP	7.75	□□□□□ -1.17
CNOT2-222	ENST00000550155	BBS9	Q3SYG4	887 aa		7.75	□□□□□ -1.17
CNOT2-222	ENST00000550155	NOL9	Q5SY16	702 aa	Known RBP	7.75	□□□□□ -1.17
CNOT2-222	ENST00000550155	RBBP8NL	Q8NC74	664 aa	Predicted RBP	7.75	□□□□□ -1.17
CNOT2-222	ENST00000550155	MAP6	Q96JE9	813 aa		7.75	□□□□□ -1.17
CNOT2-222	ENST00000550155	TOX2	Q96NM4	488 aa		7.75	□□□□□ -1.17
CNOT2-222	ENST00000550155	ACR	P10323	421 aa		7.74	□□□□□ -1.17
CNOT2-222	ENST00000550155	GUCY2C	P25092	1073 aa		7.74	□□□□□ -1.17
CNOT2-222	ENST00000550155	TIGD5	Q53EQ6	642 aa		7.74	□□□□□ -1.17
CNOT2-222	ENST00000550155	CWF19L1	Q69YN2	538 aa	Known RBP	7.74	□□□□□ -1.17
CNOT2-222	ENST00000550155	CEP128	Q6ZU80	1094 aa		7.74	□□□□□ -1.17
CNOT2-222	ENST00000550155	C7orf61	Q8IZ16	206 aa		7.74	□□□□□ -1.17
CNOT2-222	ENST00000550155	KCNN1	Q92952	543 aa		7.74	□□□□□ -1.17
CNOT2-222	ENST00000550155	INTS4	Q96HW7	963 aa	Known RBP	7.74	□□□□□ -1.17
CNOT2-222	ENST00000550155	EBF1	Q9UH73	591 aa		7.74	□□□□□ -1.17
CNOT2-222	ENST00000550155	EPB41L3	Q9Y2J2	1087 aa	Predicted RBP	7.74	□□□□□ -1.17
CNOT2-222	ENST00000550155	PSPN	O60542	156 aa		7.73	□□□□□ -1.17
CNOT2-222	ENST00000550155	USP2	O75604	605 aa	Predicted RBP	7.73	□□□□□ -1.17

Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms