RNA–Protein interactions for RNA: ENST00000549688.1

CALCOCO1-215, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 4

Gene CALCOCO1, Length 549 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-215ENST00000549688 GTF2A2P52657 109 aa8.29□□□□□ -1.08
CALCOCO1-215ENST00000549688 CCT2P78371 535 aaKnown RBP8.29□□□□□ -1.08
CALCOCO1-215ENST00000549688 SSRP1Q08945 709 aaKnown RBP8.29□□□□□ -1.08
CALCOCO1-215ENST00000549688 ZNF543Q08ER8 600 aa8.29□□□□□ -1.08
CALCOCO1-215ENST00000549688 SPP2Q13103 211 aa8.29□□□□□ -1.08
CALCOCO1-215ENST00000549688 SNAPC2Q13487 334 aa8.29□□□□□ -1.08
CALCOCO1-215ENST00000549688 MTMR2Q13614 643 aa8.29□□□□□ -1.08
CALCOCO1-215ENST00000549688 TRIM29Q14134 588 aa8.29□□□□□ -1.08
CALCOCO1-215ENST00000549688 RRP1BQ14684 758 aaKnown RBP8.29□□□□□ -1.08
CALCOCO1-215ENST00000549688 CCDC96Q2M329 555 aa8.29□□□□□ -1.08
CALCOCO1-215ENST00000549688 SH3D19Q5HYK7 790 aa8.29□□□□□ -1.08
CALCOCO1-215ENST00000549688 CCDC83Q8IWF9 413 aa8.29□□□□□ -1.08
CALCOCO1-215ENST00000549688 REM2Q8IYK8 340 aaPredicted RBP8.29□□□□□ -1.08
CALCOCO1-215ENST00000549688 LRRC47Q8N1G4 583 aaKnown RBP8.29□□□□□ -1.08
CALCOCO1-215ENST00000549688 ZNF784Q8NCA9 323 aaPredicted RBP8.29□□□□□ -1.08
CALCOCO1-215ENST00000549688 RRP36Q96EU6 259 aaKnown RBP8.29□□□□□ -1.08
CALCOCO1-215ENST00000549688 ELP3Q9H9T3 547 aa8.29□□□□□ -1.08
CALCOCO1-215ENST00000549688 GPHNQ9NQX3 736 aaPredicted RBP8.29□□□□□ -1.08
CALCOCO1-215ENST00000549688 ISY1Q9ULR0 285 aaKnown RBP8.29□□□□□ -1.08
CALCOCO1-215ENST00000549688 CIZ1Q9ULV3 898 aaPredicted RBP8.29□□□□□ -1.08
CALCOCO1-215ENST00000549688 KCNH4Q9UQ05 1017 aa8.29□□□□□ -1.08
CALCOCO1-215ENST00000549688 AFG3L2Q9Y4W6 797 aa8.29□□□□□ -1.08
CALCOCO1-215ENST00000549688 LOC285556D6RIA3 1793 aa8.29□□□□□ -1.08
CALCOCO1-215ENST00000549688 PTPRFP10586 1907 aa8.29□□□□□ -1.08
CALCOCO1-215ENST00000549688 MYPNQ86TC9 1320 aa8.29□□□□□ -1.08
CALCOCO1-215ENST00000549688 TRIM75PA6NK02 468 aa8.28□□□□□ -1.08
CALCOCO1-215ENST00000549688 TMEM88BA6NKF7 163 aa8.28□□□□□ -1.08
CALCOCO1-215ENST00000549688 UBE2Q2LH0YL09 131 aa8.28□□□□□ -1.08
CALCOCO1-215ENST00000549688 PRPF3O43395 683 aaKnown RBP8.28□□□□□ -1.08
CALCOCO1-215ENST00000549688 FMNL1O95466 1100 aaPredicted RBP8.28□□□□□ -1.08
CALCOCO1-215ENST00000549688 CETPP11597 493 aa8.28□□□□□ -1.08
CALCOCO1-215ENST00000549688 HUNKP57058 714 aa8.28□□□□□ -1.08
CALCOCO1-215ENST00000549688 IKQ13123 557 aaPredicted RBP8.28□□□□□ -1.08
CALCOCO1-215ENST00000549688 COL9A3Q14050 684 aaPredicted RBP8.28□□□□□ -1.08
CALCOCO1-215ENST00000549688 BTNL9Q6UXG8 535 aa8.28□□□□□ -1.08
CALCOCO1-215ENST00000549688 SIAH1Q8IUQ4 282 aa8.28□□□□□ -1.08
CALCOCO1-215ENST00000549688 NECAB1Q8N987 351 aa8.28□□□□□ -1.08
CALCOCO1-215ENST00000549688 CCDC148Q8NFR7 591 aa8.28□□□□□ -1.08
CALCOCO1-215ENST00000549688 SMARCC2Q8TAQ2 1214 aa8.28□□□□□ -1.08
CALCOCO1-215ENST00000549688 GTF3C2Q8WUA4 911 aaPredicted RBP8.28□□□□□ -1.08
CALCOCO1-215ENST00000549688 CCDC102AQ96A19 550 aa8.28□□□□□ -1.08
CALCOCO1-215ENST00000549688 OPTNQ96CV9 577 aa8.28□□□□□ -1.08
CALCOCO1-215ENST00000549688 OTUD5Q96G74 571 aa8.28□□□□□ -1.08
CALCOCO1-215ENST00000549688 MYL10Q9BUA6 226 aa8.28□□□□□ -1.08
CALCOCO1-215ENST00000549688 TANGO6Q9C0B7 1094 aa8.28□□□□□ -1.08
CALCOCO1-215ENST00000549688 GLT8D2Q9H1C3 349 aa8.28□□□□□ -1.08
CALCOCO1-215ENST00000549688 SENP2Q9HC62 589 aa8.28□□□□□ -1.08
CALCOCO1-215ENST00000549688 MAD2L2Q9UI95 211 aa8.28□□□□□ -1.08
CALCOCO1-215ENST00000549688 PNMA3Q9UL41 463 aa8.28□□□□□ -1.08
CALCOCO1-215ENST00000549688 SLC45A1Q9Y2W3 748 aa8.28□□□□□ -1.08
CALCOCO1-215ENST00000549688 A0A0G2JLL6 359 aaPredicted RBP8.27□□□□□ -1.09
CALCOCO1-215ENST00000549688 A0A1W2PRG0 241 aa8.27□□□□□ -1.09
CALCOCO1-215ENST00000549688 PTPDC1A2A3K4 754 aa8.27□□□□□ -1.09
CALCOCO1-215ENST00000549688 USP17L15C9J2P7 530 aa8.27□□□□□ -1.09
CALCOCO1-215ENST00000549688 USP17L13C9JLJ4 530 aa8.27□□□□□ -1.09
CALCOCO1-215ENST00000549688 USP17L11C9JVI0 530 aa8.27□□□□□ -1.09
CALCOCO1-215ENST00000549688 USP17L18D6R9N7 530 aa8.27□□□□□ -1.09
CALCOCO1-215ENST00000549688 USP17L22D6RA61 530 aa8.27□□□□□ -1.09
CALCOCO1-215ENST00000549688 USP17L17D6RBQ6 530 aa8.27□□□□□ -1.09
CALCOCO1-215ENST00000549688 USP17L19D6RCP7 530 aa8.27□□□□□ -1.09
CALCOCO1-215ENST00000549688 USP17L20D6RJB6 530 aa8.27□□□□□ -1.09
CALCOCO1-215ENST00000549688 IRF6O14896 467 aa8.27□□□□□ -1.09
CALCOCO1-215ENST00000549688 LARGE1O95461 756 aa8.27□□□□□ -1.09
CALCOCO1-215ENST00000549688 SLURP2P0DP57 97 aa8.27□□□□□ -1.09
CALCOCO1-215ENST00000549688 CDC27P30260 824 aa8.27□□□□□ -1.09
CALCOCO1-215ENST00000549688 ADD1P35611 737 aaKnown RBP8.27□□□□□ -1.09
CALCOCO1-215ENST00000549688 ECE1P42892 770 aa8.27□□□□□ -1.09
CALCOCO1-215ENST00000549688 INHBEP58166 350 aa8.27□□□□□ -1.09
CALCOCO1-215ENST00000549688 JAG1P78504 1218 aa8.27□□□□□ -1.09
CALCOCO1-215ENST00000549688 NUCB2P80303 420 aa8.27□□□□□ -1.09
CALCOCO1-215ENST00000549688 USP17L24Q0WX57 530 aa8.27□□□□□ -1.09
CALCOCO1-215ENST00000549688 CST9Q5W186 159 aa8.27□□□□□ -1.09
CALCOCO1-215ENST00000549688 OTUD7BQ6GQQ9 843 aa8.27□□□□□ -1.09
CALCOCO1-215ENST00000549688 GALNT17Q6IS24 598 aa8.27□□□□□ -1.09
CALCOCO1-215ENST00000549688 RGMBQ6NW40 437 aa8.27□□□□□ -1.09
CALCOCO1-215ENST00000549688 PPP1R18Q6NYC8 613 aa8.27□□□□□ -1.09
CALCOCO1-215ENST00000549688 PRRT2Q7Z6L0 340 aaPredicted RBP8.27□□□□□ -1.09
CALCOCO1-215ENST00000549688 SAPCD2Q86UD0 394 aa8.27□□□□□ -1.09
CALCOCO1-215ENST00000549688 CLEC10AQ8IUN9 316 aa8.27□□□□□ -1.09
CALCOCO1-215ENST00000549688 CCDC144CPQ8IYA2 1237 aa8.27□□□□□ -1.09
CALCOCO1-215ENST00000549688 PRPF38AQ8NAV1 312 aaKnown RBP8.27□□□□□ -1.09
CALCOCO1-215ENST00000549688 NSUN7Q8NE18 718 aaKnown RBP8.27□□□□□ -1.09
CALCOCO1-215ENST00000549688 NKX2-3Q8TAU0 364 aa8.27□□□□□ -1.09
CALCOCO1-215ENST00000549688 ACER1Q8TDN7 264 aa8.27□□□□□ -1.09
CALCOCO1-215ENST00000549688 WNK4Q96J92 1243 aa8.27□□□□□ -1.09
CALCOCO1-215ENST00000549688 SLF1Q9BQI6 1058 aa8.27□□□□□ -1.09
CALCOCO1-215ENST00000549688 LARP6Q9BRS8 491 aaKnown RBP8.27□□□□□ -1.09
CALCOCO1-215ENST00000549688 RIOX1Q9H6W3 641 aa8.27□□□□□ -1.09
CALCOCO1-215ENST00000549688 NCOA5Q9HCD5 579 aaKnown RBP8.27□□□□□ -1.09
CALCOCO1-215ENST00000549688 ZCCHC17Q9NP64 241 aaKnown RBP8.27□□□□□ -1.09
CALCOCO1-215ENST00000549688 SH3GLB2Q9NR46 395 aa8.27□□□□□ -1.09
CALCOCO1-215ENST00000549688 HOXC10Q9NYD6 342 aa8.27□□□□□ -1.09
CALCOCO1-215ENST00000549688 ORC3Q9UBD5 711 aaPredicted RBP8.27□□□□□ -1.09
CALCOCO1-215ENST00000549688 CTDP1Q9Y5B0 961 aaPredicted RBP8.27□□□□□ -1.09
CALCOCO1-215ENST00000549688 TLL2Q9Y6L7 1015 aa8.27□□□□□ -1.09
CALCOCO1-215ENST00000549688 CNTNAP5Q8WYK1 1306 aa8.27□□□□□ -1.09
CALCOCO1-215ENST00000549688 PNMA6FA0A0J9YX94 578 aa8.26□□□□□ -1.09
CALCOCO1-215ENST00000549688 MANSC4A6NHS7 340 aaPredicted RBP8.26□□□□□ -1.09
CALCOCO1-215ENST00000549688 TMEM232C9JQI7 657 aa8.26□□□□□ -1.09
CALCOCO1-215ENST00000549688 H3BQV1 296 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 101.8 ms