RNA–Protein interactions for RNA: ENST00000549655.5

BRF1-215, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 1,962 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-215ENST00000549655 BMP15O95972 392 aa21.92■■□□□ 1.1
BRF1-215ENST00000549655 SLURP2P0DP57 97 aa21.92■■□□□ 1.1
BRF1-215ENST00000549655 PDHBP11177 359 aa21.92■■□□□ 1.1
BRF1-215ENST00000549655 CFAP100Q494V2 611 aa21.92■■□□□ 1.1
BRF1-215ENST00000549655 TTC38Q5R3I4 469 aa21.92■■□□□ 1.1
BRF1-215ENST00000549655 LRRC47Q8N1G4 583 aaKnown RBP21.92■■□□□ 1.1
BRF1-215ENST00000549655 BARHL2Q9NY43 387 aa21.92■■□□□ 1.1
BRF1-215ENST00000549655 CLIP2Q9UDT6 1046 aa21.92■■□□□ 1.1
BRF1-215ENST00000549655 GOLGB1Q14789 3259 aaKnown RBP21.92■■□□□ 1.1
BRF1-215ENST00000549655 STXBP3O00186 592 aa21.91■■□□□ 1.1
BRF1-215ENST00000549655 SMARCA1P28370 1054 aa21.91■■□□□ 1.1
BRF1-215ENST00000549655 ZNF174Q15697 407 aa21.91■■□□□ 1.1
BRF1-215ENST00000549655 ZSCAN29Q8IWY8 852 aaPredicted RBP21.91■■□□□ 1.1
BRF1-215ENST00000549655 LARGE2Q8N3Y3 721 aa21.91■■□□□ 1.1
BRF1-215ENST00000549655 CCDC148Q8NFR7 591 aa21.91■■□□□ 1.1
BRF1-215ENST00000549655 TDRD3Q9H7E2 651 aaKnown RBP21.91■■□□□ 1.1
BRF1-215ENST00000549655 DNAJC18Q9H819 358 aa21.91■■□□□ 1.1
BRF1-215ENST00000549655 ZNF277Q9NRM2 450 aaPredicted RBP21.91■■□□□ 1.1
BRF1-215ENST00000549655 FAM13BQ9NYF5 915 aa21.91■■□□□ 1.1
BRF1-215ENST00000549655 PI4KBQ9UBF8 816 aa21.91■■□□□ 1.1
BRF1-215ENST00000549655 MPHOSPH10O00566 681 aaKnown RBP21.9■■□□□ 1.1
BRF1-215ENST00000549655 TRAPPC10P48553 1259 aa21.9■■□□□ 1.1
BRF1-215ENST00000549655 SH3BP5LQ7L8J4 393 aa21.9■■□□□ 1.1
BRF1-215ENST00000549655 RRP36Q96EU6 259 aaKnown RBP21.9■■□□□ 1.1
BRF1-215ENST00000549655 CCDC17Q96LX7 622 aa21.9■■□□□ 1.1
BRF1-215ENST00000549655 CSRNP2Q9H175 543 aa21.9■■□□□ 1.1
BRF1-215ENST00000549655 CCDC39Q9UFE4 941 aa21.9■■□□□ 1.1
BRF1-215ENST00000549655 SIPA1L1O43166 1804 aa21.89■■□□□ 1.1
BRF1-215ENST00000549655 PSME4Q14997 1843 aa21.89■■□□□ 1.1
BRF1-215ENST00000549655 KIF13BQ9NQT8 1826 aa21.89■■□□□ 1.1
BRF1-215ENST00000549655 FRMPD2Q68DX3 1309 aaPredicted RBP21.89■■□□□ 1.1
BRF1-215ENST00000549655 ZBTB7AO95365 584 aa21.89■■□□□ 1.09
BRF1-215ENST00000549655 IQCB1Q15051 598 aa21.89■■□□□ 1.09
BRF1-215ENST00000549655 ZRSR1Q15695 479 aaKnown RBP21.89■■□□□ 1.09
BRF1-215ENST00000549655 LONRF3Q496Y0 759 aa21.89■■□□□ 1.09
BRF1-215ENST00000549655 GALNT17Q6IS24 598 aa21.89■■□□□ 1.09
BRF1-215ENST00000549655 RSBN1LQ6PCB5 846 aaPredicted RBP21.89■■□□□ 1.09
BRF1-215ENST00000549655 FAM177A1Q8N128 213 aaPredicted RBP21.89■■□□□ 1.09
BRF1-215ENST00000549655 PRMT6Q96LA8 375 aaPredicted RBP21.89■■□□□ 1.09
BRF1-215ENST00000549655 M0R2N6 131 aa21.88■■□□□ 1.09
BRF1-215ENST00000549655 RAD17O75943 681 aa21.88■■□□□ 1.09
BRF1-215ENST00000549655 PTMAP06454 111 aaKnown RBP21.88■■□□□ 1.09
BRF1-215ENST00000549655 ASPRV1Q53RT3 343 aa21.88■■□□□ 1.09
BRF1-215ENST00000549655 KRBA2Q6ZNG9 492 aa21.88■■□□□ 1.09
BRF1-215ENST00000549655 HOMER1Q86YM7 354 aa21.88■■□□□ 1.09
BRF1-215ENST00000549655 DAGLBQ8NCG7 672 aa21.88■■□□□ 1.09
BRF1-215ENST00000549655 UBA5Q9GZZ9 404 aa21.88■■□□□ 1.09
BRF1-215ENST00000549655 VAT1LQ9HCJ6 419 aa21.88■■□□□ 1.09
BRF1-215ENST00000549655 SEC63Q9UGP8 760 aaKnown RBP21.88■■□□□ 1.09
BRF1-215ENST00000549655 GREB1LQ9C091 1923 aaPredicted RBP21.88■■□□□ 1.09
BRF1-215ENST00000549655 FAM196BA6NMK8 535 aa21.88■■□□□ 1.09
BRF1-215ENST00000549655 SNHG28P0DPA3 235 aa21.88■■□□□ 1.09
BRF1-215ENST00000549655 ZSCAN30Q86W11 494 aa21.88■■□□□ 1.09
BRF1-215ENST00000549655 CEP57L1Q8IYX8 460 aa21.88■■□□□ 1.09
BRF1-215ENST00000549655 CNNM3Q8NE01 707 aa21.88■■□□□ 1.09
BRF1-215ENST00000549655 RASGRP4Q8TDF6 673 aa21.88■■□□□ 1.09
BRF1-215ENST00000549655 PSMD14O00487 310 aa21.87■■□□□ 1.09
BRF1-215ENST00000549655 PTGDRQ13258 359 aa21.87■■□□□ 1.09
BRF1-215ENST00000549655 FERMT2Q96AC1 680 aa21.87■■□□□ 1.09
BRF1-215ENST00000549655 TRIM34Q9BYJ4 488 aa21.87■■□□□ 1.09
BRF1-215ENST00000549655 RIOX1Q9H6W3 641 aa21.87■■□□□ 1.09
BRF1-215ENST00000549655 VIL1P09327 827 aaKnown RBP21.87■■□□□ 1.09
BRF1-215ENST00000549655 ATP2C1P98194 919 aaPredicted RBP21.87■■□□□ 1.09
BRF1-215ENST00000549655 ATP2B2Q01814 1243 aa21.87■■□□□ 1.09
BRF1-215ENST00000549655 CERKLQ49MI3 558 aaPredicted RBP21.87■■□□□ 1.09
BRF1-215ENST00000549655 FOXP4Q8IVH2 680 aaPredicted RBP21.87■■□□□ 1.09
BRF1-215ENST00000549655 PIGSQ96S52 555 aa21.87■■□□□ 1.09
BRF1-215ENST00000549655 NAT10Q9H0A0 1025 aaKnown RBP21.87■■□□□ 1.09
BRF1-215ENST00000549655 PCDHA6Q9UN73 950 aa21.87■■□□□ 1.09
BRF1-215ENST00000549655 PCDHA8Q9Y5H6 950 aa21.87■■□□□ 1.09
BRF1-215ENST00000549655 COL4A5P29400 1685 aa21.86■■□□□ 1.09
BRF1-215ENST00000549655 BIN1O00499 593 aa21.86■■□□□ 1.09
BRF1-215ENST00000549655 POLR2DO15514 142 aaKnown RBP21.86■■□□□ 1.09
BRF1-215ENST00000549655 ENTPD3O75355 529 aa21.86■■□□□ 1.09
BRF1-215ENST00000549655 NAPAP54920 295 aa21.86■■□□□ 1.09
BRF1-215ENST00000549655 PPP4R3BQ5MIZ7 849 aa21.86■■□□□ 1.09
BRF1-215ENST00000549655 SOGA3Q5TF21 947 aa21.86■■□□□ 1.09
BRF1-215ENST00000549655 USP49Q70CQ1 688 aa21.86■■□□□ 1.09
BRF1-215ENST00000549655 METTL16Q86W50 562 aaKnown RBP21.86■■□□□ 1.09
BRF1-215ENST00000549655 CCDC12Q8WUD4 166 aaPredicted RBP21.86■■□□□ 1.09
BRF1-215ENST00000549655 ZMYND12Q9H0C1 365 aa21.86■■□□□ 1.09
BRF1-215ENST00000549655 VPS33BQ9H267 617 aa21.86■■□□□ 1.09
BRF1-215ENST00000549655 PIM2Q9P1W9 311 aa21.86■■□□□ 1.09
BRF1-215ENST00000549655 CCDC194A0A1B0GVG4 234 aa21.85■■□□□ 1.09
BRF1-215ENST00000549655 GOLGA6L19H0YKK7 550 aa21.85■■□□□ 1.09
BRF1-215ENST00000549655 MCM7P33993 719 aa21.85■■□□□ 1.09
BRF1-215ENST00000549655 TGFB2P61812 414 aa21.85■■□□□ 1.09
BRF1-215ENST00000549655 PNOCQ13519 176 aa21.85■■□□□ 1.09
BRF1-215ENST00000549655 DPCR1Q3MIW9 517 aa21.85■■□□□ 1.09
BRF1-215ENST00000549655 CCDC125Q86Z20 511 aa21.85■■□□□ 1.09
BRF1-215ENST00000549655 GMLQ99445 158 aa21.85■■□□□ 1.09
BRF1-215ENST00000549655 GPCPD1Q9NPB8 672 aa21.85■■□□□ 1.09
BRF1-215ENST00000549655 TUBE1Q9UJT0 475 aa21.85■■□□□ 1.09
BRF1-215ENST00000549655 ATF5Q9Y2D1 282 aaPredicted RBP21.85■■□□□ 1.09
BRF1-215ENST00000549655 MYH4Q9Y623 1939 aa21.85■■□□□ 1.09
BRF1-215ENST00000549655 NLRP12P59046 1061 aa21.85■■□□□ 1.09
BRF1-215ENST00000549655 ZNF543Q08ER8 600 aa21.85■■□□□ 1.09
BRF1-215ENST00000549655 TATDN1Q6P1N9 297 aa21.85■■□□□ 1.09
BRF1-215ENST00000549655 DHX40Q8IX18 779 aaKnown RBP21.85■■□□□ 1.09
BRF1-215ENST00000549655 ELOA2Q8IYF1 753 aaPredicted RBP21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms