RNA–Protein interactions for RNA: ENST00000549396.5

PPFIA2-216, Transcript of PTPRF interacting protein alpha 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PPFIA2, Length 5,363 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-216ENST00000549396 KLHDC4Q8TBB5 520 aa10.3□□□□□ -0.76
PPFIA2-216ENST00000549396 TIGD1Q96MW7 591 aa10.3□□□□□ -0.76
PPFIA2-216ENST00000549396 HOMER2Q9NSB8 354 aa10.3□□□□□ -0.76
PPFIA2-216ENST00000549396 COL4A3BPQ9Y5P4 624 aa10.3□□□□□ -0.76
PPFIA2-216ENST00000549396 OPA1O60313 960 aa10.3□□□□□ -0.76
PPFIA2-216ENST00000549396 STK10O94804 968 aaKnown RBP10.3□□□□□ -0.76
PPFIA2-216ENST00000549396 FMNL1O95466 1100 aaPredicted RBP10.3□□□□□ -0.76
PPFIA2-216ENST00000549396 POSTNQ15063 836 aa10.3□□□□□ -0.76
PPFIA2-216ENST00000549396 CDC37Q16543 378 aaPredicted RBP10.3□□□□□ -0.76
PPFIA2-216ENST00000549396 SPATA31A1Q5TZJ5 1347 aa10.3□□□□□ -0.76
PPFIA2-216ENST00000549396 KLRF2D3W0D1 207 aa10.29□□□□□ -0.76
PPFIA2-216ENST00000549396 TTLL11Q8NHH1 800 aa10.29□□□□□ -0.76
PPFIA2-216ENST00000549396 ZKSCAN3Q9BRR0 538 aa10.29□□□□□ -0.76
PPFIA2-216ENST00000549396 JADE2Q9NQC1 790 aa10.29□□□□□ -0.76
PPFIA2-216ENST00000549396 MTRF1LQ9UGC7 380 aaKnown RBP10.29□□□□□ -0.76
PPFIA2-216ENST00000549396 MYSM1Q5VVJ2 828 aa10.29□□□□□ -0.76
PPFIA2-216ENST00000549396 NSMFQ6X4W1 530 aa10.29□□□□□ -0.76
PPFIA2-216ENST00000549396 TMTC1Q8IUR5 882 aa10.29□□□□□ -0.76
PPFIA2-216ENST00000549396 ADPGKQ9BRR6 497 aa10.29□□□□□ -0.76
PPFIA2-216ENST00000549396 TRIM6Q9C030 488 aaPredicted RBP10.29□□□□□ -0.76
PPFIA2-216ENST00000549396 NSRP1Q9H0G5 558 aaKnown RBP10.29□□□□□ -0.76
PPFIA2-216ENST00000549396 INCENPQ9NQS7 918 aa10.29□□□□□ -0.76
PPFIA2-216ENST00000549396 STK17AQ9UEE5 414 aa10.29□□□□□ -0.76
PPFIA2-216ENST00000549396 HSF2BPO75031 334 aa10.29□□□□□ -0.76
PPFIA2-216ENST00000549396 MYCLP12524 364 aaPredicted RBP10.29□□□□□ -0.76
PPFIA2-216ENST00000549396 GNG11P61952 73 aa10.29□□□□□ -0.76
PPFIA2-216ENST00000549396 SURF1Q15526 300 aa10.29□□□□□ -0.76
PPFIA2-216ENST00000549396 LEO1Q8WVC0 666 aaPredicted RBP10.29□□□□□ -0.76
PPFIA2-216ENST00000549396 GTPBP6O43824 516 aaPredicted RBP10.29□□□□□ -0.76
PPFIA2-216ENST00000549396 ASIC2Q16515 512 aa10.29□□□□□ -0.76
PPFIA2-216ENST00000549396 LRRC24Q50LG9 513 aa10.29□□□□□ -0.76
PPFIA2-216ENST00000549396 TAF3Q5VWG9 929 aa10.29□□□□□ -0.76
PPFIA2-216ENST00000549396 SPECC1LQ69YQ0 1117 aa10.29□□□□□ -0.76
PPFIA2-216ENST00000549396 TAX1BP1Q86VP1 789 aa10.29□□□□□ -0.76
PPFIA2-216ENST00000549396 DEPTORQ8TB45 409 aa10.29□□□□□ -0.76
PPFIA2-216ENST00000549396 ZNF512BQ96KM6 892 aaPredicted RBP10.29□□□□□ -0.76
PPFIA2-216ENST00000549396 LARSQ9P2J5 1176 aaKnown RBP10.29□□□□□ -0.76
PPFIA2-216ENST00000549396 STK36Q9NRP7 1315 aa10.29□□□□□ -0.76
PPFIA2-216ENST00000549396 POLR1AO95602 1720 aaPredicted RBP10.29□□□□□ -0.76
PPFIA2-216ENST00000549396 IQCA1LA6NCM1 817 aa10.29□□□□□ -0.76
PPFIA2-216ENST00000549396 CCDC169A6NNP5 214 aa10.29□□□□□ -0.76
PPFIA2-216ENST00000549396 A6NNZ2 444 aa10.29□□□□□ -0.76
PPFIA2-216ENST00000549396 ASNSP08243 561 aa10.29□□□□□ -0.76
PPFIA2-216ENST00000549396 SKILP12757 684 aa10.29□□□□□ -0.76
PPFIA2-216ENST00000549396 CMA1P23946 247 aa10.29□□□□□ -0.76
PPFIA2-216ENST00000549396 ATP5DP30049 168 aa10.29□□□□□ -0.76
PPFIA2-216ENST00000549396 CCND2P30279 289 aa10.29□□□□□ -0.76
PPFIA2-216ENST00000549396 TXKP42681 527 aa10.29□□□□□ -0.76
PPFIA2-216ENST00000549396 NKX1-1Q15270 411 aaPredicted RBP10.29□□□□□ -0.76
PPFIA2-216ENST00000549396 TUBB8Q3ZCM7 444 aa10.29□□□□□ -0.76
PPFIA2-216ENST00000549396 LARP6Q9BRS8 491 aaKnown RBP10.29□□□□□ -0.76
PPFIA2-216ENST00000549396 MLXIPQ9HAP2 919 aa10.29□□□□□ -0.76
PPFIA2-216ENST00000549396 DBNLQ9UJU6 430 aaKnown RBP10.29□□□□□ -0.76
PPFIA2-216ENST00000549396 FERP16591 822 aa10.28□□□□□ -0.76
PPFIA2-216ENST00000549396 TNFAIP3P21580 790 aa10.28□□□□□ -0.76
PPFIA2-216ENST00000549396 PTPN12Q05209 780 aaKnown RBP10.28□□□□□ -0.76
PPFIA2-216ENST00000549396 ELMSAN1Q6PJG2 1045 aa10.28□□□□□ -0.76
PPFIA2-216ENST00000549396 UBL4BQ8N7F7 174 aa10.28□□□□□ -0.76
PPFIA2-216ENST00000549396 CCDC26Q8TAB7 109 aa10.28□□□□□ -0.76
PPFIA2-216ENST00000549396 LSG1Q9H089 658 aaKnown RBP10.28□□□□□ -0.76
PPFIA2-216ENST00000549396 GDPD2Q9HCC8 539 aa10.28□□□□□ -0.76
PPFIA2-216ENST00000549396 PCDHA4Q9UN74 947 aa10.28□□□□□ -0.76
PPFIA2-216ENST00000549396 PALM3A6NDB9 673 aaPredicted RBP10.28□□□□□ -0.76
PPFIA2-216ENST00000549396 BRD1O95696 1058 aa10.28□□□□□ -0.76
PPFIA2-216ENST00000549396 CFBP00751 764 aa10.28□□□□□ -0.76
PPFIA2-216ENST00000549396 FGAP02671 866 aa10.28□□□□□ -0.76
PPFIA2-216ENST00000549396 PHKA1P46020 1223 aa10.28□□□□□ -0.76
PPFIA2-216ENST00000549396 MAP2K1Q02750 393 aaPredicted RBP10.28□□□□□ -0.76
PPFIA2-216ENST00000549396 SLC9C1Q4G0N8 1177 aa10.28□□□□□ -0.76
PPFIA2-216ENST00000549396 RGS22Q8NE09 1264 aa10.28□□□□□ -0.76
PPFIA2-216ENST00000549396 ZNF341Q9BYN7 854 aa10.28□□□□□ -0.76
PPFIA2-216ENST00000549396 DNAJC25Q9H1X3 360 aa10.28□□□□□ -0.76
PPFIA2-216ENST00000549396 PRPF3O43395 683 aaKnown RBP10.28□□□□□ -0.76
PPFIA2-216ENST00000549396 BIRC3Q13489 604 aa10.28□□□□□ -0.76
PPFIA2-216ENST00000549396 CHST3Q7LGC8 479 aa10.28□□□□□ -0.76
PPFIA2-216ENST00000549396 TEX2Q8IWB9 1127 aa10.28□□□□□ -0.76
PPFIA2-216ENST00000549396 CSGALNACT2Q8N6G5 542 aa10.28□□□□□ -0.76
PPFIA2-216ENST00000549396 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.28□□□□□ -0.76
PPFIA2-216ENST00000549396 IFT122Q9HBG6 1241 aa10.28□□□□□ -0.76
PPFIA2-216ENST00000549396 LCMT1Q9UIC8 334 aa10.28□□□□□ -0.76
PPFIA2-216ENST00000549396 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.28□□□□□ -0.76
PPFIA2-216ENST00000549396 CD2APQ9Y5K6 639 aa10.28□□□□□ -0.76
PPFIA2-216ENST00000549396 FLOT1O75955 427 aa10.28□□□□□ -0.76
PPFIA2-216ENST00000549396 RETREG2Q8NC44 543 aa10.28□□□□□ -0.76
PPFIA2-216ENST00000549396 NEK9Q8TD19 979 aa10.28□□□□□ -0.76
PPFIA2-216ENST00000549396 KIFC2Q96AC6 838 aa10.28□□□□□ -0.76
PPFIA2-216ENST00000549396 HLTFQ14527 1009 aaKnown RBP eCLIP10.27□□□□□ -0.76
PPFIA2-216ENST00000549396 EAPPQ56P03 285 aaPredicted RBP10.27□□□□□ -0.76
PPFIA2-216ENST00000549396 MIS18BP1Q6P0N0 1132 aa10.27□□□□□ -0.76
PPFIA2-216ENST00000549396 CSRNP1Q96S65 589 aa10.27□□□□□ -0.76
PPFIA2-216ENST00000549396 CCPG1Q9ULG6 757 aa10.27□□□□□ -0.76
PPFIA2-216ENST00000549396 SETD1BQ9UPS6 1966 aaKnown RBP10.27□□□□□ -0.77
PPFIA2-216ENST00000549396 SPATA31A5Q5VU36 1347 aa10.27□□□□□ -0.77
PPFIA2-216ENST00000549396 SPATA31A7Q8IWB4 1347 aa10.27□□□□□ -0.77
PPFIA2-216ENST00000549396 BMP3P12645 472 aa10.27□□□□□ -0.77
PPFIA2-216ENST00000549396 ZNF445P59923 1031 aa10.27□□□□□ -0.77
PPFIA2-216ENST00000549396 TBC1D8BQ0IIM8 1120 aa10.27□□□□□ -0.77
PPFIA2-216ENST00000549396 CALR3Q96L12 384 aaKnown RBP10.27□□□□□ -0.77
PPFIA2-216ENST00000549396 A0A0D9SFI3 127 aa10.27□□□□□ -0.77
PPFIA2-216ENST00000549396 TCP10Q12799 353 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms