RNA–Protein interactions for RNA: ENST00000549274.1

SMARCD1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-206ENST00000549274 SPRYD3Q8NCJ5 442 aa11.39□□□□□ -0.59
SMARCD1-206ENST00000549274 CHURC1Q8WUH1 139 aa11.39□□□□□ -0.59
SMARCD1-206ENST00000549274 CLMNQ96JQ2 1002 aa11.39□□□□□ -0.59
SMARCD1-206ENST00000549274 FEM1BQ9UK73 627 aa11.39□□□□□ -0.59
SMARCD1-206ENST00000549274 NAP1L2Q9ULW6 460 aaPredicted RBP11.39□□□□□ -0.59
SMARCD1-206ENST00000549274 SLC45A1Q9Y2W3 748 aa11.39□□□□□ -0.59
SMARCD1-206ENST00000549274 KIF3AQ9Y496 699 aa11.39□□□□□ -0.59
SMARCD1-206ENST00000549274 MYPNQ86TC9 1320 aa11.38□□□□□ -0.59
SMARCD1-206ENST00000549274 TRIM75PA6NK02 468 aa11.38□□□□□ -0.59
SMARCD1-206ENST00000549274 GOLGA8BA8MQT2 603 aa11.38□□□□□ -0.59
SMARCD1-206ENST00000549274 CPLX1O14810 134 aa11.38□□□□□ -0.59
SMARCD1-206ENST00000549274 IRF6O14896 467 aa11.38□□□□□ -0.59
SMARCD1-206ENST00000549274 NMT2O60551 498 aa11.38□□□□□ -0.59
SMARCD1-206ENST00000549274 SNHG28P0DPA3 235 aa11.38□□□□□ -0.59
SMARCD1-206ENST00000549274 BMP3P12645 472 aa11.38□□□□□ -0.59
SMARCD1-206ENST00000549274 FMR1Q06787 632 aaKnown RBP eCLIP11.38□□□□□ -0.59
SMARCD1-206ENST00000549274 MTMR2Q13614 643 aa11.38□□□□□ -0.59
SMARCD1-206ENST00000549274 NBR1Q14596 966 aa11.38□□□□□ -0.59
SMARCD1-206ENST00000549274 RTN1Q16799 776 aa11.38□□□□□ -0.59
SMARCD1-206ENST00000549274 DEFB115Q30KQ5 88 aa11.38□□□□□ -0.59
SMARCD1-206ENST00000549274 DLK2Q6UY11 383 aa11.38□□□□□ -0.59
SMARCD1-206ENST00000549274 MOB2Q70IA6 237 aa11.38□□□□□ -0.59
SMARCD1-206ENST00000549274 RASAL3Q86YV0 1011 aa11.38□□□□□ -0.59
SMARCD1-206ENST00000549274 LRRC47Q8N1G4 583 aaKnown RBP11.38□□□□□ -0.59
SMARCD1-206ENST00000549274 LRRC2Q9BYS8 371 aa11.38□□□□□ -0.59
SMARCD1-206ENST00000549274 SLKQ9H2G2 1235 aaPredicted RBP11.38□□□□□ -0.59
SMARCD1-206ENST00000549274 GOLGA8AA7E2F4 631 aa11.37□□□□□ -0.59
SMARCD1-206ENST00000549274 USP17L15C9J2P7 530 aa11.37□□□□□ -0.59
SMARCD1-206ENST00000549274 USP17L13C9JLJ4 530 aa11.37□□□□□ -0.59
SMARCD1-206ENST00000549274 USP17L11C9JVI0 530 aa11.37□□□□□ -0.59
SMARCD1-206ENST00000549274 USP17L18D6R9N7 530 aa11.37□□□□□ -0.59
SMARCD1-206ENST00000549274 USP17L22D6RA61 530 aa11.37□□□□□ -0.59
SMARCD1-206ENST00000549274 USP17L17D6RBQ6 530 aa11.37□□□□□ -0.59
SMARCD1-206ENST00000549274 USP17L19D6RCP7 530 aa11.37□□□□□ -0.59
SMARCD1-206ENST00000549274 USP17L20D6RJB6 530 aa11.37□□□□□ -0.59
SMARCD1-206ENST00000549274 RAD21O60216 631 aa11.37□□□□□ -0.59
SMARCD1-206ENST00000549274 NDUFB10O96000 172 aa11.37□□□□□ -0.59
SMARCD1-206ENST00000549274 SLURP2P0DP57 97 aa11.37□□□□□ -0.59
SMARCD1-206ENST00000549274 PDHBP11177 359 aa11.37□□□□□ -0.59
SMARCD1-206ENST00000549274 CPA1P15085 419 aa11.37□□□□□ -0.59
SMARCD1-206ENST00000549274 OSBPP22059 807 aa11.37□□□□□ -0.59
SMARCD1-206ENST00000549274 STAT2P52630 851 aa11.37□□□□□ -0.59
SMARCD1-206ENST00000549274 APOBRQ0VD83 1088 aa11.37□□□□□ -0.59
SMARCD1-206ENST00000549274 USP17L24Q0WX57 530 aa11.37□□□□□ -0.59
SMARCD1-206ENST00000549274 TROAPQ12815 778 aa11.37□□□□□ -0.59
SMARCD1-206ENST00000549274 IKQ13123 557 aaPredicted RBP11.37□□□□□ -0.59
SMARCD1-206ENST00000549274 TOB2Q14106 344 aaPredicted RBP11.37□□□□□ -0.59
SMARCD1-206ENST00000549274 GRM4Q14833 912 aa11.37□□□□□ -0.59
SMARCD1-206ENST00000549274 CCDC96Q2M329 555 aa11.37□□□□□ -0.59
SMARCD1-206ENST00000549274 MICU3Q86XE3 530 aa11.37□□□□□ -0.59
SMARCD1-206ENST00000549274 FANCBQ8NB91 859 aa11.37□□□□□ -0.59
SMARCD1-206ENST00000549274 FZD1Q9UP38 647 aa11.37□□□□□ -0.59
SMARCD1-206ENST00000549274 AGTPBP1Q9UPW5 1226 aa11.37□□□□□ -0.59
SMARCD1-206ENST00000549274 A0A1W2PRG0 241 aa11.36□□□□□ -0.59
SMARCD1-206ENST00000549274 TESPA1A2RU30 521 aaPredicted RBP11.36□□□□□ -0.59
SMARCD1-206ENST00000549274 K7ELQ4 463 aaPredicted RBP11.36□□□□□ -0.59
SMARCD1-206ENST00000549274 PFKFB2O60825 505 aa11.36□□□□□ -0.59
SMARCD1-206ENST00000549274 ALDH1A1P00352 501 aa11.36□□□□□ -0.59
SMARCD1-206ENST00000549274 HSPA6P17066 643 aa11.36□□□□□ -0.59
SMARCD1-206ENST00000549274 PDIA3P30101 505 aaKnown RBP11.36□□□□□ -0.59
SMARCD1-206ENST00000549274 HOXA7P31268 230 aaPredicted RBP11.36□□□□□ -0.59
SMARCD1-206ENST00000549274 MAP2K2P36507 400 aa11.36□□□□□ -0.59
SMARCD1-206ENST00000549274 HMGCS2P54868 508 aa11.36□□□□□ -0.59
SMARCD1-206ENST00000549274 C1QTNF8P60827 252 aa11.36□□□□□ -0.59
SMARCD1-206ENST00000549274 IRX3P78415 501 aaPredicted RBP11.36□□□□□ -0.59
SMARCD1-206ENST00000549274 JAG1P78504 1218 aa11.36□□□□□ -0.59
SMARCD1-206ENST00000549274 AKAP17AQ02040 695 aaKnown RBP11.36□□□□□ -0.59
SMARCD1-206ENST00000549274 ZNF543Q08ER8 600 aa11.36□□□□□ -0.59
SMARCD1-206ENST00000549274 GADL1Q6ZQY3 521 aa11.36□□□□□ -0.59
SMARCD1-206ENST00000549274 ANKRD23Q86SG2 305 aa11.36□□□□□ -0.59
SMARCD1-206ENST00000549274 SIAH1Q8IUQ4 282 aa11.36□□□□□ -0.59
SMARCD1-206ENST00000549274 TRIM22Q8IYM9 498 aa11.36□□□□□ -0.59
SMARCD1-206ENST00000549274 MB21D1Q8N884 522 aa11.36□□□□□ -0.59
SMARCD1-206ENST00000549274 SP7Q8TDD2 431 aaPredicted RBP11.36□□□□□ -0.59
SMARCD1-206ENST00000549274 ACER1Q8TDN7 264 aa11.36□□□□□ -0.59
SMARCD1-206ENST00000549274 NUP133Q8WUM0 1156 aa11.36□□□□□ -0.59
SMARCD1-206ENST00000549274 TCEANC2Q96MN5 208 aa11.36□□□□□ -0.59
SMARCD1-206ENST00000549274 LLPHQ9BRT6 129 aaKnown RBP11.36□□□□□ -0.59
SMARCD1-206ENST00000549274 HOXC10Q9NYD6 342 aa11.36□□□□□ -0.59
SMARCD1-206ENST00000549274 ISY1Q9ULR0 285 aaKnown RBP11.36□□□□□ -0.59
SMARCD1-206ENST00000549274 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.36□□□□□ -0.59
SMARCD1-206ENST00000549274 CTDP1Q9Y5B0 961 aaPredicted RBP11.36□□□□□ -0.59
SMARCD1-206ENST00000549274 MYH6P13533 1939 aa11.35□□□□□ -0.59
SMARCD1-206ENST00000549274 CCL15-CCL14A0A0B4J2E2 113 aa11.35□□□□□ -0.59
SMARCD1-206ENST00000549274 PDIA4P13667 645 aaKnown RBP11.35□□□□□ -0.59
SMARCD1-206ENST00000549274 VCAM1P19320 739 aa11.35□□□□□ -0.59
SMARCD1-206ENST00000549274 HMGN5P82970 282 aaKnown RBP11.35□□□□□ -0.59
SMARCD1-206ENST00000549274 ZYXQ15942 572 aaKnown RBP11.35□□□□□ -0.59
SMARCD1-206ENST00000549274 CCL15Q16663 113 aa11.35□□□□□ -0.59
SMARCD1-206ENST00000549274 BTNL9Q6UXG8 535 aa11.35□□□□□ -0.59
SMARCD1-206ENST00000549274 CLEC10AQ8IUN9 316 aa11.35□□□□□ -0.59
SMARCD1-206ENST00000549274 TEX2Q8IWB9 1127 aa11.35□□□□□ -0.59
SMARCD1-206ENST00000549274 FAM177A1Q8N128 213 aaPredicted RBP11.35□□□□□ -0.59
SMARCD1-206ENST00000549274 PRPF38AQ8NAV1 312 aaKnown RBP11.35□□□□□ -0.59
SMARCD1-206ENST00000549274 WASF1Q92558 559 aa11.35□□□□□ -0.59
SMARCD1-206ENST00000549274 SPZ1Q9BXG8 430 aa11.35□□□□□ -0.59
SMARCD1-206ENST00000549274 TANGO6Q9C0B7 1094 aa11.35□□□□□ -0.59
SMARCD1-206ENST00000549274 EMILIN3Q9NT22 766 aa11.35□□□□□ -0.59
SMARCD1-206ENST00000549274 PALM3A6NDB9 673 aaPredicted RBP11.34□□□□□ -0.59
SMARCD1-206ENST00000549274 KLRF2D3W0D1 207 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms