RNA–Protein interactions for RNA: ENST00000549226.5

CACNB3-211, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 2

Gene CACNB3, Length 929 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-211ENST00000549226 ZNF713Q8N859 430 aaPredicted RBP16.39■□□□□ 0.21
CACNB3-211ENST00000549226 ACER1Q8TDN7 264 aa16.39■□□□□ 0.21
CACNB3-211ENST00000549226 PHKBQ93100 1093 aa16.39■□□□□ 0.21
CACNB3-211ENST00000549226 ZKSCAN4Q969J2 545 aaPredicted RBP16.39■□□□□ 0.21
CACNB3-211ENST00000549226 GPBP1L1Q9HC44 474 aaPredicted RBP16.39■□□□□ 0.21
CACNB3-211ENST00000549226 H3BQV1 296 aa16.38■□□□□ 0.21
CACNB3-211ENST00000549226 WDR46O15213 610 aaKnown RBP16.38■□□□□ 0.21
CACNB3-211ENST00000549226 BRD1O95696 1058 aa16.38■□□□□ 0.21
CACNB3-211ENST00000549226 POTEIP0CG38 1075 aa16.38■□□□□ 0.21
CACNB3-211ENST00000549226 POTEJP0CG39 1038 aa16.38■□□□□ 0.21
CACNB3-211ENST00000549226 FDPSP14324 419 aaKnown RBP16.38■□□□□ 0.21
CACNB3-211ENST00000549226 ECE1P42892 770 aa16.38■□□□□ 0.21
CACNB3-211ENST00000549226 BACE1P56817 501 aa16.38■□□□□ 0.21
CACNB3-211ENST00000549226 PPATQ06203 517 aa16.38■□□□□ 0.21
CACNB3-211ENST00000549226 IFFO2Q5TF58 517 aa16.38■□□□□ 0.21
CACNB3-211ENST00000549226 ERO1BQ86YB8 467 aa16.38■□□□□ 0.21
CACNB3-211ENST00000549226 C8orf76Q96K31 380 aa16.38■□□□□ 0.21
CACNB3-211ENST00000549226 C12orf42Q96LP6 360 aa16.38■□□□□ 0.21
CACNB3-211ENST00000549226 ALG1Q9BT22 464 aa16.38■□□□□ 0.21
CACNB3-211ENST00000549226 RIOX1Q9H6W3 641 aa16.38■□□□□ 0.21
CACNB3-211ENST00000549226 SEC63Q9UGP8 760 aaKnown RBP16.38■□□□□ 0.21
CACNB3-211ENST00000549226 MTMR7Q9Y216 660 aa16.38■□□□□ 0.21
CACNB3-211ENST00000549226 ATP6V1DQ9Y5K8 247 aa16.38■□□□□ 0.21
CACNB3-211ENST00000549226 SNCAIPQ9Y6H5 919 aa16.38■□□□□ 0.21
CACNB3-211ENST00000549226 DOCK1Q14185 1865 aa16.37■□□□□ 0.21
CACNB3-211ENST00000549226 TRAF1Q13077 416 aa16.37■□□□□ 0.21
CACNB3-211ENST00000549226 PFKFB3Q16875 520 aaPredicted RBP16.37■□□□□ 0.21
CACNB3-211ENST00000549226 LDLRAD1Q5T700 205 aa16.37■□□□□ 0.21
CACNB3-211ENST00000549226 BTNL9Q6UXG8 535 aa16.37■□□□□ 0.21
CACNB3-211ENST00000549226 FAM160B2Q86V87 743 aa16.37■□□□□ 0.21
CACNB3-211ENST00000549226 STAG2Q8N3U4 1231 aa16.37■□□□□ 0.21
CACNB3-211ENST00000549226 ZNF526Q8TF50 670 aaPredicted RBP16.37■□□□□ 0.21
CACNB3-211ENST00000549226 CHURC1Q8WUH1 139 aa16.37■□□□□ 0.21
CACNB3-211ENST00000549226 RRP36Q96EU6 259 aaKnown RBP16.37■□□□□ 0.21
CACNB3-211ENST00000549226 ZHX2Q9Y6X8 837 aa16.37■□□□□ 0.21
CACNB3-211ENST00000549226 PAPPA2Q9BXP8 1791 aa16.36■□□□□ 0.21
CACNB3-211ENST00000549226 SPDYE5A6NIY4 337 aa16.36■□□□□ 0.21
CACNB3-211ENST00000549226 RAD21O60216 631 aa16.36■□□□□ 0.21
CACNB3-211ENST00000549226 GOLGA8HP0CJ92 632 aa16.36■□□□□ 0.21
CACNB3-211ENST00000549226 ZSCAN22P10073 491 aaPredicted RBP16.36■□□□□ 0.21
CACNB3-211ENST00000549226 SCG2P13521 617 aa16.36■□□□□ 0.21
CACNB3-211ENST00000549226 STAT2P52630 851 aa16.36■□□□□ 0.21
CACNB3-211ENST00000549226 PRKG1Q13976 671 aa16.36■□□□□ 0.21
CACNB3-211ENST00000549226 C2orf69Q8N8R5 385 aa16.36■□□□□ 0.21
CACNB3-211ENST00000549226 FBXO18Q8NFZ0 1043 aa16.36■□□□□ 0.21
CACNB3-211ENST00000549226 CCDC12Q8WUD4 166 aaPredicted RBP16.36■□□□□ 0.21
CACNB3-211ENST00000549226 SH3GLB2Q9NR46 395 aa16.36■□□□□ 0.21
CACNB3-211ENST00000549226 FEM1BQ9UK73 627 aa16.36■□□□□ 0.21
CACNB3-211ENST00000549226 MTMR6Q9Y217 621 aa16.36■□□□□ 0.21
CACNB3-211ENST00000549226 AFG3L2Q9Y4W6 797 aa16.36■□□□□ 0.21
CACNB3-211ENST00000549226 V9GY48 417 aaPredicted RBP16.36■□□□□ 0.21
CACNB3-211ENST00000549226 CXCL11O14625 94 aa16.35■□□□□ 0.21
CACNB3-211ENST00000549226 SPP2Q13103 211 aa16.35■□□□□ 0.21
CACNB3-211ENST00000549226 PPIL2Q13356 520 aa16.35■□□□□ 0.21
CACNB3-211ENST00000549226 MTMR2Q13614 643 aa16.35■□□□□ 0.21
CACNB3-211ENST00000549226 SAFBQ15424 915 aaKnown RBP eCLIP16.35■□□□□ 0.21
CACNB3-211ENST00000549226 SH3D19Q5HYK7 790 aa16.35■□□□□ 0.21
CACNB3-211ENST00000549226 TEX2Q8IWB9 1127 aa16.35■□□□□ 0.21
CACNB3-211ENST00000549226 CCDC82Q8N4S0 544 aa16.35■□□□□ 0.21
CACNB3-211ENST00000549226 CCDC148Q8NFR7 591 aa16.35■□□□□ 0.21
CACNB3-211ENST00000549226 ZSCAN16Q9H4T2 348 aaPredicted RBP16.35■□□□□ 0.21
CACNB3-211ENST00000549226 GBA2Q9HCG7 927 aaPredicted RBP16.35■□□□□ 0.21
CACNB3-211ENST00000549226 GPCPD1Q9NPB8 672 aa16.35■□□□□ 0.21
CACNB3-211ENST00000549226 TMOD4Q9NZQ9 345 aa16.35■□□□□ 0.21
CACNB3-211ENST00000549226 PNMA2Q9UL42 364 aa16.35■□□□□ 0.21
CACNB3-211ENST00000549226 ISY1Q9ULR0 285 aaKnown RBP16.35■□□□□ 0.21
CACNB3-211ENST00000549226 FRMPD2Q68DX3 1309 aaPredicted RBP16.35■□□□□ 0.21
CACNB3-211ENST00000549226 VPS37CA5D8V6 355 aaPredicted RBP16.34■□□□□ 0.21
CACNB3-211ENST00000549226 TRAF5O00463 557 aa16.34■□□□□ 0.21
CACNB3-211ENST00000549226 CYTH3O43739 400 aa16.34■□□□□ 0.21
CACNB3-211ENST00000549226 FDX1P10109 184 aa16.34■□□□□ 0.21
CACNB3-211ENST00000549226 SYDE2Q5VT97 1194 aa16.34■□□□□ 0.21
CACNB3-211ENST00000549226 GALNT17Q6IS24 598 aa16.34■□□□□ 0.21
CACNB3-211ENST00000549226 PPP1R18Q6NYC8 613 aa16.34■□□□□ 0.21
CACNB3-211ENST00000549226 KCTD1Q719H9 257 aa16.34■□□□□ 0.21
CACNB3-211ENST00000549226 CMTR1Q8N1G2 835 aaKnown RBP16.34■□□□□ 0.21
CACNB3-211ENST00000549226 MTMR8Q96EF0 704 aa16.34■□□□□ 0.21
CACNB3-211ENST00000549226 BRMS1Q9HCU9 246 aa16.34■□□□□ 0.21
CACNB3-211ENST00000549226 POLR2AP24928 1970 aaKnown RBP16.34■□□□□ 0.21
CACNB3-211ENST00000549226 MYH4Q9Y623 1939 aa16.33■□□□□ 0.21
CACNB3-211ENST00000549226 PNMA6FA0A0J9YX94 578 aa16.33■□□□□ 0.2
CACNB3-211ENST00000549226 TMEM232C9JQI7 657 aa16.33■□□□□ 0.2
CACNB3-211ENST00000549226 ZBTB5O15062 677 aa16.33■□□□□ 0.2
CACNB3-211ENST00000549226 CELF2O95319 508 aaKnown RBP16.33■□□□□ 0.2
CACNB3-211ENST00000549226 ITGBL1O95965 494 aaPredicted RBP16.33■□□□□ 0.2
CACNB3-211ENST00000549226 CALML3P27482 149 aa16.33■□□□□ 0.2
CACNB3-211ENST00000549226 IKQ13123 557 aaPredicted RBP16.33■□□□□ 0.2
CACNB3-211ENST00000549226 PKN1Q16512 942 aa16.33■□□□□ 0.2
CACNB3-211ENST00000549226 FAM83BQ5T0W9 1011 aa16.33■□□□□ 0.2
CACNB3-211ENST00000549226 DLK2Q6UY11 383 aa16.33■□□□□ 0.2
CACNB3-211ENST00000549226 ADGRF4Q8IZF3 695 aa16.33■□□□□ 0.2
CACNB3-211ENST00000549226 SMC1BQ8NDV3 1235 aa16.33■□□□□ 0.2
CACNB3-211ENST00000549226 BARHL2Q9NY43 387 aa16.33■□□□□ 0.2
CACNB3-211ENST00000549226 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.33■□□□□ 0.2
CACNB3-211ENST00000549226 FZD1Q9UP38 647 aa16.33■□□□□ 0.2
CACNB3-211ENST00000549226 KCNH4Q9UQ05 1017 aa16.33■□□□□ 0.2
CACNB3-211ENST00000549226 ATAD5Q96QE3 1844 aa16.33■□□□□ 0.2
CACNB3-211ENST00000549226 TRIM75PA6NK02 468 aa16.32■□□□□ 0.2
CACNB3-211ENST00000549226 F13A1P00488 732 aa16.32■□□□□ 0.2
CACNB3-211ENST00000549226 VCAM1P19320 739 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms