RNA–Protein interactions for RNA: ENST00000549034.1

RAB5B-205, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5B, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-205ENST00000549034 IFIT1BQ5T764 474 aaKnown RBP11.28□□□□□ -0.6
RAB5B-205ENST00000549034 RCSD1Q6JBY9 416 aa11.28□□□□□ -0.6
RAB5B-205ENST00000549034 CHRDL2Q6WN34 429 aa11.28□□□□□ -0.6
RAB5B-205ENST00000549034 RASEFQ8IZ41 740 aa11.28□□□□□ -0.6
RAB5B-205ENST00000549034 GMCL1P1Q8NEA9 526 aa11.28□□□□□ -0.6
RAB5B-205ENST00000549034 ANKS1AQ92625 1134 aa11.28□□□□□ -0.6
RAB5B-205ENST00000549034 NEK1Q96PY6 1258 aa11.28□□□□□ -0.6
RAB5B-205ENST00000549034 KAT14Q9H8E8 782 aa11.28□□□□□ -0.6
RAB5B-205ENST00000549034 SYNPO2Q9UMS6 1093 aa11.28□□□□□ -0.6
RAB5B-205ENST00000549034 LOC285556D6RIA3 1793 aa11.28□□□□□ -0.6
RAB5B-205ENST00000549034 PEX10O60683 326 aa11.27□□□□□ -0.61
RAB5B-205ENST00000549034 EIF5BO60841 1220 aaKnown RBP11.27□□□□□ -0.61
RAB5B-205ENST00000549034 BCRP11274 1271 aa11.27□□□□□ -0.61
RAB5B-205ENST00000549034 MCM5P33992 734 aa11.27□□□□□ -0.61
RAB5B-205ENST00000549034 KRT32Q14532 448 aa11.27□□□□□ -0.61
RAB5B-205ENST00000549034 SART3Q15020 963 aaKnown RBP11.27□□□□□ -0.61
RAB5B-205ENST00000549034 Q3C1V9 767 aa11.27□□□□□ -0.61
RAB5B-205ENST00000549034 TSGA10IPQ3SY00 556 aa11.27□□□□□ -0.61
RAB5B-205ENST00000549034 NOM1Q5C9Z4 860 aaKnown RBP11.27□□□□□ -0.61
RAB5B-205ENST00000549034 ENAHQ8N8S7 591 aaPredicted RBP11.27□□□□□ -0.61
RAB5B-205ENST00000549034 GPRC5AQ8NFJ5 357 aa11.27□□□□□ -0.61
RAB5B-205ENST00000549034 CD99L2Q8TCZ2 262 aa11.27□□□□□ -0.61
RAB5B-205ENST00000549034 ERO1AQ96HE7 468 aa11.27□□□□□ -0.61
RAB5B-205ENST00000549034 PAGR1Q9BTK6 254 aa11.27□□□□□ -0.61
RAB5B-205ENST00000549034 RBPJLQ9UBG7 517 aa11.27□□□□□ -0.61
RAB5B-205ENST00000549034 TNKSO95271 1327 aa11.27□□□□□ -0.61
RAB5B-205ENST00000549034 TMEM232C9JQI7 657 aa11.26□□□□□ -0.61
RAB5B-205ENST00000549034 EPB41L2O43491 1005 aaKnown RBP11.26□□□□□ -0.61
RAB5B-205ENST00000549034 PRC1O43663 620 aa11.26□□□□□ -0.61
RAB5B-205ENST00000549034 FMNL1O95466 1100 aaPredicted RBP11.26□□□□□ -0.61
RAB5B-205ENST00000549034 SEC24BO95487 1268 aa11.26□□□□□ -0.61
RAB5B-205ENST00000549034 IKQ13123 557 aaPredicted RBP11.26□□□□□ -0.61
RAB5B-205ENST00000549034 WTAPQ15007 396 aa11.26□□□□□ -0.61
RAB5B-205ENST00000549034 ARHGEF6Q15052 776 aa11.26□□□□□ -0.61
RAB5B-205ENST00000549034 SEC23AQ15436 765 aa11.26□□□□□ -0.61
RAB5B-205ENST00000549034 CCDC96Q2M329 555 aa11.26□□□□□ -0.61
RAB5B-205ENST00000549034 ADCK5Q3MIX3 580 aa11.26□□□□□ -0.61
RAB5B-205ENST00000549034 TMEM67Q5HYA8 995 aa11.26□□□□□ -0.61
RAB5B-205ENST00000549034 KCTD1Q719H9 257 aa11.26□□□□□ -0.61
RAB5B-205ENST00000549034 CCAR1Q8IX12 1150 aaKnown RBP11.26□□□□□ -0.61
RAB5B-205ENST00000549034 MB21D2Q8IYB1 491 aaPredicted RBP11.26□□□□□ -0.61
RAB5B-205ENST00000549034 PNMA1Q8ND90 353 aa11.26□□□□□ -0.61
RAB5B-205ENST00000549034 IGDCC4Q8TDY8 1250 aa11.26□□□□□ -0.61
RAB5B-205ENST00000549034 GTF3C2Q8WUA4 911 aaPredicted RBP11.26□□□□□ -0.61
RAB5B-205ENST00000549034 CHURC1Q8WUH1 139 aa11.26□□□□□ -0.61
RAB5B-205ENST00000549034 KCNB2Q92953 911 aa11.26□□□□□ -0.61
RAB5B-205ENST00000549034 KIFC2Q96AC6 838 aa11.26□□□□□ -0.61
RAB5B-205ENST00000549034 GMCL1Q96IK5 515 aa11.26□□□□□ -0.61
RAB5B-205ENST00000549034 TXNRD2Q9NNW7 524 aa11.26□□□□□ -0.61
RAB5B-205ENST00000549034 GPCPD1Q9NPB8 672 aa11.26□□□□□ -0.61
RAB5B-205ENST00000549034 FBXO28Q9NVF7 368 aa11.26□□□□□ -0.61
RAB5B-205ENST00000549034 FEM1BQ9UK73 627 aa11.26□□□□□ -0.61
RAB5B-205ENST00000549034 RABGAP1Q9Y3P9 1069 aa11.26□□□□□ -0.61
RAB5B-205ENST00000549034 CTDP1Q9Y5B0 961 aaPredicted RBP11.26□□□□□ -0.61
RAB5B-205ENST00000549034 SNX14Q9Y5W7 946 aa11.26□□□□□ -0.61
RAB5B-205ENST00000549034 SPDYE16A6NNV3 312 aaPredicted RBP11.25□□□□□ -0.61
RAB5B-205ENST00000549034 PSMA5P28066 241 aa11.25□□□□□ -0.61
RAB5B-205ENST00000549034 PSMC4P43686 418 aa11.25□□□□□ -0.61
RAB5B-205ENST00000549034 SLC4A3P48751 1232 aa11.25□□□□□ -0.61
RAB5B-205ENST00000549034 ANTXR2P58335 489 aa11.25□□□□□ -0.61
RAB5B-205ENST00000549034 LACTBP83111 547 aaPredicted RBP11.25□□□□□ -0.61
RAB5B-205ENST00000549034 PLS1Q14651 629 aa11.25□□□□□ -0.61
RAB5B-205ENST00000549034 TTBK2Q6IQ55 1244 aa11.25□□□□□ -0.61
RAB5B-205ENST00000549034 POTEEQ6S8J3 1075 aa11.25□□□□□ -0.61
RAB5B-205ENST00000549034 DHX32Q7L7V1 743 aaKnown RBP11.25□□□□□ -0.61
RAB5B-205ENST00000549034 TMTC2Q8N394 836 aa11.25□□□□□ -0.61
RAB5B-205ENST00000549034 PRPF38AQ8NAV1 312 aaKnown RBP11.25□□□□□ -0.61
RAB5B-205ENST00000549034 DCAF4Q8WV16 495 aa11.25□□□□□ -0.61
RAB5B-205ENST00000549034 ATG4CQ96DT6 458 aa11.25□□□□□ -0.61
RAB5B-205ENST00000549034 JAKMIP1Q96N16 626 aaKnown RBP11.25□□□□□ -0.61
RAB5B-205ENST00000549034 SLF1Q9BQI6 1058 aa11.25□□□□□ -0.61
RAB5B-205ENST00000549034 LRRC2Q9BYS8 371 aa11.25□□□□□ -0.61
RAB5B-205ENST00000549034 ARHGAP39Q9C0H5 1083 aa11.25□□□□□ -0.61
RAB5B-205ENST00000549034 BTBD7Q9P203 1132 aa11.25□□□□□ -0.61
RAB5B-205ENST00000549034 PPP1R9AQ9ULJ8 1098 aa11.25□□□□□ -0.61
RAB5B-205ENST00000549034 TRIM17Q9Y577 477 aa11.25□□□□□ -0.61
RAB5B-205ENST00000549034 FRMPD2Q68DX3 1309 aaPredicted RBP11.25□□□□□ -0.61
RAB5B-205ENST00000549034 ADGRA2Q96PE1 1338 aa11.25□□□□□ -0.61
RAB5B-205ENST00000549034 ZBED4O75132 1171 aa11.24□□□□□ -0.61
RAB5B-205ENST00000549034 CNMDO75829 334 aa11.24□□□□□ -0.61
RAB5B-205ENST00000549034 HMGB1P09429 215 aaKnown RBP11.24□□□□□ -0.61
RAB5B-205ENST00000549034 GOLGA8HP0CJ92 632 aa11.24□□□□□ -0.61
RAB5B-205ENST00000549034 PDHBP11177 359 aa11.24□□□□□ -0.61
RAB5B-205ENST00000549034 HOXD10P28358 340 aa11.24□□□□□ -0.61
RAB5B-205ENST00000549034 SLC16A2P36021 539 aa11.24□□□□□ -0.61
RAB5B-205ENST00000549034 FCGRTP55899 365 aa11.24□□□□□ -0.61
RAB5B-205ENST00000549034 ERVK-9P63128 1117 aa11.24□□□□□ -0.61
RAB5B-205ENST00000549034 ERVK-24P63145 666 aa11.24□□□□□ -0.61
RAB5B-205ENST00000549034 EXOSC10Q01780 885 aaKnown RBP11.24□□□□□ -0.61
RAB5B-205ENST00000549034 COL9A3Q14050 684 aaPredicted RBP11.24□□□□□ -0.61
RAB5B-205ENST00000549034 FAM110CQ1W6H9 321 aa11.24□□□□□ -0.61
RAB5B-205ENST00000549034 COL13A1Q5TAT6 717 aaPredicted RBP11.24□□□□□ -0.61
RAB5B-205ENST00000549034 LBX2Q6XYB7 198 aa11.24□□□□□ -0.61
RAB5B-205ENST00000549034 NFXL1Q6ZNB6 911 aa11.24□□□□□ -0.61
RAB5B-205ENST00000549034 FAM160B2Q86V87 743 aa11.24□□□□□ -0.61
RAB5B-205ENST00000549034 TMEM87BQ96K49 555 aa11.24□□□□□ -0.61
RAB5B-205ENST00000549034 TCEANC2Q96MN5 208 aa11.24□□□□□ -0.61
RAB5B-205ENST00000549034 EFCC1Q9HA90 598 aa11.24□□□□□ -0.61
RAB5B-205ENST00000549034 SENP2Q9HC62 589 aa11.24□□□□□ -0.61
RAB5B-205ENST00000549034 CWC22Q9HCG8 908 aaKnown RBP11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms