RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 EIF3CLB5ME19 914 aaKnown RBP15.49■□□□□ 0.07
HDAC7-228ENST00000548938 CCDC148Q8NFR7 591 aa15.49■□□□□ 0.07
HDAC7-228ENST00000548938 STAG1Q8WVM7 1258 aa15.49■□□□□ 0.07
HDAC7-228ENST00000548938 ACSBG1Q96GR2 724 aa15.49■□□□□ 0.07
HDAC7-228ENST00000548938 EIF3CQ99613 913 aaKnown RBP15.49■□□□□ 0.07
HDAC7-228ENST00000548938 SYF2O95926 243 aaKnown RBP15.48■□□□□ 0.07
HDAC7-228ENST00000548938 TUBBP07437 444 aa15.48■□□□□ 0.07
HDAC7-228ENST00000548938 CTSWP56202 376 aa15.48■□□□□ 0.07
HDAC7-228ENST00000548938 RRAGBQ5VZM2 374 aa15.48■□□□□ 0.07
HDAC7-228ENST00000548938 KIF6Q6ZMV9 814 aa15.48■□□□□ 0.07
HDAC7-228ENST00000548938 LCORLQ8N3X6 602 aa15.48■□□□□ 0.07
HDAC7-228ENST00000548938 TFR2Q9UP52 801 aa15.48■□□□□ 0.07
HDAC7-228ENST00000548938 ZNF174Q15697 407 aa15.48■□□□□ 0.07
HDAC7-228ENST00000548938 TRAPPC11Q7Z392 1133 aa15.48■□□□□ 0.07
HDAC7-228ENST00000548938 C8orf37Q96NL8 207 aa15.48■□□□□ 0.07
HDAC7-228ENST00000548938 MKRN1Q9UHC7 482 aaKnown RBP15.48■□□□□ 0.07
HDAC7-228ENST00000548938 UQCRFS1P1P0C7P4 283 aa15.47■□□□□ 0.07
HDAC7-228ENST00000548938 KRT2P35908 639 aa15.47■□□□□ 0.07
HDAC7-228ENST00000548938 USP14P54578 494 aa15.47■□□□□ 0.07
HDAC7-228ENST00000548938 SPATA5Q8NB90 893 aa15.47■□□□□ 0.07
HDAC7-228ENST00000548938 A0A0G2JS52 829 aa15.47■□□□□ 0.07
HDAC7-228ENST00000548938 LRRC10BA6NIK2 292 aa15.47■□□□□ 0.07
HDAC7-228ENST00000548938 KCNJ18B7U540 433 aa15.47■□□□□ 0.07
HDAC7-228ENST00000548938 SNAP23O00161 211 aa15.47■□□□□ 0.07
HDAC7-228ENST00000548938 SRGAP2O75044 1071 aa15.47■□□□□ 0.07
HDAC7-228ENST00000548938 NDUFA10O95299 355 aa15.47■□□□□ 0.07
HDAC7-228ENST00000548938 MAGEA9P43362 315 aa15.47■□□□□ 0.07
HDAC7-228ENST00000548938 RASGRF1Q13972 1273 aa15.47■□□□□ 0.07
HDAC7-228ENST00000548938 KCNJ12Q14500 433 aa15.47■□□□□ 0.07
HDAC7-228ENST00000548938 PKN1Q16512 942 aa15.47■□□□□ 0.07
HDAC7-228ENST00000548938 TCP11X2Q5H9J9 407 aa15.47■□□□□ 0.07
HDAC7-228ENST00000548938 GOLGA6L1Q8N7Z2 621 aa15.47■□□□□ 0.07
HDAC7-228ENST00000548938 RIN2Q8WYP3 895 aaPredicted RBP15.47■□□□□ 0.07
HDAC7-228ENST00000548938 FERMT2Q96AC1 680 aa15.47■□□□□ 0.07
HDAC7-228ENST00000548938 NGLY1Q96IV0 654 aa15.47■□□□□ 0.07
HDAC7-228ENST00000548938 GDAP1L1Q96MZ0 367 aa15.47■□□□□ 0.07
HDAC7-228ENST00000548938 MMS19Q96T76 1030 aa15.47■□□□□ 0.07
HDAC7-228ENST00000548938 ZBTB1Q9Y2K1 713 aa15.47■□□□□ 0.07
HDAC7-228ENST00000548938 EPN1Q9Y6I3 576 aaPredicted RBP15.47■□□□□ 0.07
HDAC7-228ENST00000548938 SLC4A4Q9Y6R1 1079 aa15.47■□□□□ 0.07
HDAC7-228ENST00000548938 PRPF6O94906 941 aaKnown RBP15.46■□□□□ 0.07
HDAC7-228ENST00000548938 ATP1A1P05023 1023 aaKnown RBP15.46■□□□□ 0.07
HDAC7-228ENST00000548938 AARSP49588 968 aaKnown RBP eCLIP15.46■□□□□ 0.078e-6■■□□□ 13.9
HDAC7-228ENST00000548938 MAP3K12Q12852 859 aa15.46■□□□□ 0.07
HDAC7-228ENST00000548938 HLFQ16534 295 aa15.46■□□□□ 0.07
HDAC7-228ENST00000548938 PACS2Q86VP3 889 aa15.46■□□□□ 0.07
HDAC7-228ENST00000548938 AFAP1L1Q8TED9 768 aa15.46■□□□□ 0.07
HDAC7-228ENST00000548938 PHF20Q9BVI0 1012 aa15.46■□□□□ 0.07
HDAC7-228ENST00000548938 RNF26Q9BY78 433 aaPredicted RBP15.46■□□□□ 0.07
HDAC7-228ENST00000548938 HPCAL4Q9UM19 191 aa15.46■□□□□ 0.07
HDAC7-228ENST00000548938 CDHR2Q9BYE9 1310 aa15.46■□□□□ 0.07
HDAC7-228ENST00000548938 PAK1Q13153 545 aa15.46■□□□□ 0.07
HDAC7-228ENST00000548938 TRIM14Q14142 442 aa15.46■□□□□ 0.07
HDAC7-228ENST00000548938 NELFBQ8WX92 580 aa15.46■□□□□ 0.07
HDAC7-228ENST00000548938 CAPZA3Q96KX2 299 aa15.46■□□□□ 0.07
HDAC7-228ENST00000548938 MTRQ99707 1265 aa15.46■□□□□ 0.07
HDAC7-228ENST00000548938 UBAC1Q9BSL1 405 aa15.46■□□□□ 0.07
HDAC7-228ENST00000548938 VIPAS39Q9H9C1 493 aa15.46■□□□□ 0.07
HDAC7-228ENST00000548938 RWDD2AQ9UIY3 292 aa15.46■□□□□ 0.07
HDAC7-228ENST00000548938 MAPK8IP1Q9UQF2 711 aa15.46■□□□□ 0.07
HDAC7-228ENST00000548938 DOT1LQ8TEK3 1739 aa15.46■□□□□ 0.07
HDAC7-228ENST00000548938 ZC3H4Q9UPT8 1303 aaKnown RBP15.46■□□□□ 0.06
HDAC7-228ENST00000548938 ZMYND10O75800 440 aa15.45■□□□□ 0.06
HDAC7-228ENST00000548938 UBXN1Q04323 297 aa15.45■□□□□ 0.06
HDAC7-228ENST00000548938 E2F4Q16254 413 aa15.45■□□□□ 0.06
HDAC7-228ENST00000548938 NLRP10Q86W26 655 aa15.45■□□□□ 0.06
HDAC7-228ENST00000548938 GSPT2Q8IYD1 628 aaKnown RBP15.45■□□□□ 0.06
HDAC7-228ENST00000548938 TNKSO95271 1327 aa15.45■□□□□ 0.06
HDAC7-228ENST00000548938 MYH6P13533 1939 aa15.45■□□□□ 0.06
HDAC7-228ENST00000548938 TTC26A0AVF1 554 aa15.45■□□□□ 0.06
HDAC7-228ENST00000548938 SMIM22K7EJ46 135 aa15.45■□□□□ 0.06
HDAC7-228ENST00000548938 PSMD14O00487 310 aa15.45■□□□□ 0.06
HDAC7-228ENST00000548938 CORO7P57737 925 aa15.45■□□□□ 0.06
HDAC7-228ENST00000548938 SPAG1Q07617 926 aa15.45■□□□□ 0.06
HDAC7-228ENST00000548938 PUM3Q15397 648 aaKnown RBP15.45■□□□□ 0.06
HDAC7-228ENST00000548938 FAM98CQ17RN3 349 aaKnown RBP15.45■□□□□ 0.06
HDAC7-228ENST00000548938 MIGA1Q8NAN2 632 aa15.45■□□□□ 0.06
HDAC7-228ENST00000548938 IRS4O14654 1257 aaPredicted RBP15.45■□□□□ 0.06
HDAC7-228ENST00000548938 HERVK_113P62684 666 aa15.45■□□□□ 0.06
HDAC7-228ENST00000548938 PTGDRQ13258 359 aa15.45■□□□□ 0.06
HDAC7-228ENST00000548938 TTC31Q49AM3 519 aaPredicted RBP15.45■□□□□ 0.06
HDAC7-228ENST00000548938 CERS3Q8IU89 383 aa15.45■□□□□ 0.06
HDAC7-228ENST00000548938 TMTC2Q8N394 836 aa15.45■□□□□ 0.06
HDAC7-228ENST00000548938 NACAP1Q9BZK3 213 aa15.45■□□□□ 0.06
HDAC7-228ENST00000548938 PPFIA4O75335 1185 aa15.44■□□□□ 0.06
HDAC7-228ENST00000548938 PLEKHA8P1O95397 391 aa15.44■□□□□ 0.06
HDAC7-228ENST00000548938 XBP1P17861 261 aa15.44■□□□□ 0.06
HDAC7-228ENST00000548938 RCAN1P53805 252 aa15.44■□□□□ 0.06
HDAC7-228ENST00000548938 TTC38Q5R3I4 469 aa15.44■□□□□ 0.06
HDAC7-228ENST00000548938 PDXDC2PQ6P474 469 aa15.44■□□□□ 0.06
HDAC7-228ENST00000548938 ANKRD20A12PQ8NF67 263 aa15.44■□□□□ 0.06
HDAC7-228ENST00000548938 CTCFLQ8NI51 663 aaPredicted RBP15.44■□□□□ 0.06
HDAC7-228ENST00000548938 LPIN2Q92539 896 aa15.44■□□□□ 0.06
HDAC7-228ENST00000548938 GDAQ9Y2T3 454 aa15.44■□□□□ 0.06
HDAC7-228ENST00000548938 SAR1BQ9Y6B6 198 aa15.44■□□□□ 0.06
HDAC7-228ENST00000548938 FGFR2P21802 821 aa15.44■□□□□ 0.06
HDAC7-228ENST00000548938 SEC23AQ15436 765 aa15.44■□□□□ 0.06
HDAC7-228ENST00000548938 GIGYF2Q6Y7W6 1299 aaKnown RBP15.44■□□□□ 0.06
HDAC7-228ENST00000548938 COG1Q8WTW3 980 aa15.44■□□□□ 0.06
HDAC7-228ENST00000548938 V9GY48 417 aaPredicted RBP15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms