RNA–Protein interactions for RNA: ENST00000548868.5

SCRN3-212, Transcript of secernin 3, humanhuman

TSL 2

Gene SCRN3, Length 1,594 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN3-212ENST00000548868 PARP14Q460N5 1801 aa13.1□□□□□ -0.31
SCRN3-212ENST00000548868 PALM3A6NDB9 673 aaPredicted RBP13.1□□□□□ -0.31
SCRN3-212ENST00000548868 CPLX1O14810 134 aa13.1□□□□□ -0.31
SCRN3-212ENST00000548868 CDKL5O76039 1030 aa13.1□□□□□ -0.31
SCRN3-212ENST00000548868 NDUFB10O96000 172 aa13.1□□□□□ -0.31
SCRN3-212ENST00000548868 RXRAP19793 462 aa13.1□□□□□ -0.31
SCRN3-212ENST00000548868 GPATCH4Q5T3I0 446 aaKnown RBP13.1□□□□□ -0.31
SCRN3-212ENST00000548868 USP17L2Q6R6M4 530 aa13.1□□□□□ -0.31
SCRN3-212ENST00000548868 RAB11FIP4Q86YS3 637 aa13.1□□□□□ -0.31
SCRN3-212ENST00000548868 LZTS2Q9BRK4 669 aa13.1□□□□□ -0.31
SCRN3-212ENST00000548868 CXCL11O14625 94 aa13.09□□□□□ -0.31
SCRN3-212ENST00000548868 HSP90AA1P07900 732 aaKnown RBP13.09□□□□□ -0.31
SCRN3-212ENST00000548868 SMARCA1P28370 1054 aa13.09□□□□□ -0.31
SCRN3-212ENST00000548868 CDC27P30260 824 aa13.09□□□□□ -0.31
SCRN3-212ENST00000548868 SLC1A4P43007 532 aa13.09□□□□□ -0.31
SCRN3-212ENST00000548868 ZNF543Q08ER8 600 aa13.09□□□□□ -0.31
SCRN3-212ENST00000548868 ST3GAL1Q11201 340 aa13.09□□□□□ -0.31
SCRN3-212ENST00000548868 MTMR2Q13614 643 aa13.09□□□□□ -0.31
SCRN3-212ENST00000548868 SH3D19Q5HYK7 790 aa13.09□□□□□ -0.31
SCRN3-212ENST00000548868 CCDC144CPQ8IYA2 1237 aa13.09□□□□□ -0.31
SCRN3-212ENST00000548868 OPTNQ96CV9 577 aa13.09□□□□□ -0.31
SCRN3-212ENST00000548868 C12orf42Q96LP6 360 aa13.09□□□□□ -0.31
SCRN3-212ENST00000548868 NCOA5Q9HCD5 579 aaKnown RBP13.09□□□□□ -0.31
SCRN3-212ENST00000548868 FAM217BQ9NTX9 383 aaPredicted RBP13.09□□□□□ -0.31
SCRN3-212ENST00000548868 MAD2L2Q9UI95 211 aa13.09□□□□□ -0.31
SCRN3-212ENST00000548868 KCNH4Q9UQ05 1017 aa13.09□□□□□ -0.31
SCRN3-212ENST00000548868 MTMR7Q9Y216 660 aa13.09□□□□□ -0.31
SCRN3-212ENST00000548868 TRIM75PA6NK02 468 aa13.08□□□□□ -0.32
SCRN3-212ENST00000548868 WDR46O15213 610 aaKnown RBP13.08□□□□□ -0.32
SCRN3-212ENST00000548868 RAD21O60216 631 aa13.08□□□□□ -0.32
SCRN3-212ENST00000548868 BMP3P12645 472 aa13.08□□□□□ -0.32
SCRN3-212ENST00000548868 IFNAR1P17181 557 aa13.08□□□□□ -0.32
SCRN3-212ENST00000548868 ADD1P35611 737 aaKnown RBP13.08□□□□□ -0.32
SCRN3-212ENST00000548868 HUNKP57058 714 aa13.08□□□□□ -0.32
SCRN3-212ENST00000548868 CCDC96Q2M329 555 aa13.08□□□□□ -0.32
SCRN3-212ENST00000548868 TMTC3Q6ZXV5 915 aa13.08□□□□□ -0.32
SCRN3-212ENST00000548868 OTUD5Q96G74 571 aa13.08□□□□□ -0.32
SCRN3-212ENST00000548868 TMEM88BA6NKF7 163 aa13.07□□□□□ -0.32
SCRN3-212ENST00000548868 KLRF2D3W0D1 207 aa13.07□□□□□ -0.32
SCRN3-212ENST00000548868 ZYXQ15942 572 aaKnown RBP13.07□□□□□ -0.32
SCRN3-212ENST00000548868 NTRK3Q16288 839 aa13.07□□□□□ -0.32
SCRN3-212ENST00000548868 SAPCD2Q86UD0 394 aa13.07□□□□□ -0.32
SCRN3-212ENST00000548868 WNK4Q96J92 1243 aa13.07□□□□□ -0.32
SCRN3-212ENST00000548868 EMILIN3Q9NT22 766 aa13.07□□□□□ -0.32
SCRN3-212ENST00000548868 TMOD4Q9NZQ9 345 aa13.07□□□□□ -0.32
SCRN3-212ENST00000548868 BAZ2BQ9UIF8 2168 aaKnown RBP13.07□□□□□ -0.32
SCRN3-212ENST00000548868 TLL2Q9Y6L7 1015 aa13.07□□□□□ -0.32
SCRN3-212ENST00000548868 A0A0G2JLL6 359 aaPredicted RBP13.07□□□□□ -0.32
SCRN3-212ENST00000548868 IRF6O14896 467 aa13.07□□□□□ -0.32
SCRN3-212ENST00000548868 PLA2G6O60733 806 aa13.07□□□□□ -0.32
SCRN3-212ENST00000548868 ZBTB48P10074 688 aaPredicted RBP13.07□□□□□ -0.32
SCRN3-212ENST00000548868 HMGN5P82970 282 aaKnown RBP13.07□□□□□ -0.32
SCRN3-212ENST00000548868 KIAA1755Q5JYT7 1200 aa13.07□□□□□ -0.32
SCRN3-212ENST00000548868 PRRT2Q7Z6L0 340 aaPredicted RBP13.07□□□□□ -0.32
SCRN3-212ENST00000548868 REM2Q8IYK8 340 aaPredicted RBP13.07□□□□□ -0.32
SCRN3-212ENST00000548868 STAG2Q8N3U4 1231 aa13.07□□□□□ -0.32
SCRN3-212ENST00000548868 PROCA1Q8NCQ7 364 aaPredicted RBP13.07□□□□□ -0.32
SCRN3-212ENST00000548868 NSUN7Q8NE18 718 aaKnown RBP13.07□□□□□ -0.32
SCRN3-212ENST00000548868 SMARCC2Q8TAQ2 1214 aa13.07□□□□□ -0.32
SCRN3-212ENST00000548868 HHIPL1Q96JK4 782 aa13.07□□□□□ -0.32
SCRN3-212ENST00000548868 SPZ1Q9BXG8 430 aa13.07□□□□□ -0.32
SCRN3-212ENST00000548868 RBM27Q9P2N5 1060 aaKnown RBP13.07□□□□□ -0.32
SCRN3-212ENST00000548868 FRMPD2Q68DX3 1309 aaPredicted RBP13.06□□□□□ -0.32
SCRN3-212ENST00000548868 STK36Q9NRP7 1315 aa13.06□□□□□ -0.32
SCRN3-212ENST00000548868 PLEKHA8P1O95397 391 aa13.06□□□□□ -0.32
SCRN3-212ENST00000548868 CTDNEP1O95476 244 aa13.06□□□□□ -0.32
SCRN3-212ENST00000548868 GOLGA8HP0CJ92 632 aa13.06□□□□□ -0.32
SCRN3-212ENST00000548868 HMGCS2P54868 508 aa13.06□□□□□ -0.32
SCRN3-212ENST00000548868 SNAPC2Q13487 334 aa13.06□□□□□ -0.32
SCRN3-212ENST00000548868 FAM83BQ5T0W9 1011 aa13.06□□□□□ -0.32
SCRN3-212ENST00000548868 BTNL9Q6UXG8 535 aa13.06□□□□□ -0.32
SCRN3-212ENST00000548868 KCTD1Q719H9 257 aa13.06□□□□□ -0.32
SCRN3-212ENST00000548868 RASGRP2Q7LDG7 609 aa13.06□□□□□ -0.32
SCRN3-212ENST00000548868 FAM160B2Q86V87 743 aa13.06□□□□□ -0.32
SCRN3-212ENST00000548868 TRIM22Q8IYM9 498 aa13.06□□□□□ -0.32
SCRN3-212ENST00000548868 SPICE1Q8N0Z3 855 aa13.06□□□□□ -0.32
SCRN3-212ENST00000548868 SRBD1Q8N5C6 995 aaKnown RBP13.06□□□□□ -0.32
SCRN3-212ENST00000548868 CHURC1Q8WUH1 139 aa13.06□□□□□ -0.32
SCRN3-212ENST00000548868 RNF26Q9BY78 433 aaPredicted RBP13.06□□□□□ -0.32
SCRN3-212ENST00000548868 CWC22Q9HCG8 908 aaKnown RBP13.06□□□□□ -0.32
SCRN3-212ENST00000548868 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.06□□□□□ -0.32
SCRN3-212ENST00000548868 FEM1BQ9UK73 627 aa13.06□□□□□ -0.32
SCRN3-212ENST00000548868 SMC3Q9UQE7 1217 aa13.06□□□□□ -0.32
SCRN3-212ENST00000548868 KIF3AQ9Y496 699 aa13.06□□□□□ -0.32
SCRN3-212ENST00000548868 RLFQ13129 1914 aa13.06□□□□□ -0.32
SCRN3-212ENST00000548868 CNTNAP5Q8WYK1 1306 aa13.06□□□□□ -0.32
SCRN3-212ENST00000548868 PTPDC1A2A3K4 754 aa13.05□□□□□ -0.32
SCRN3-212ENST00000548868 FMNL1O95466 1100 aaPredicted RBP13.05□□□□□ -0.32
SCRN3-212ENST00000548868 VCAM1P19320 739 aa13.05□□□□□ -0.32
SCRN3-212ENST00000548868 GJA5P36382 358 aa13.05□□□□□ -0.32
SCRN3-212ENST00000548868 STAT2P52630 851 aa13.05□□□□□ -0.32
SCRN3-212ENST00000548868 SSRP1Q08945 709 aaKnown RBP13.05□□□□□ -0.32
SCRN3-212ENST00000548868 FUT2Q10981 343 aa13.05□□□□□ -0.32
SCRN3-212ENST00000548868 SPRYD7Q5W111 196 aa13.05□□□□□ -0.32
SCRN3-212ENST00000548868 RGMBQ6NW40 437 aa13.05□□□□□ -0.32
SCRN3-212ENST00000548868 FASTKD5Q7L8L6 764 aaKnown RBP13.05□□□□□ -0.32
SCRN3-212ENST00000548868 NBPF11Q86T75 865 aa13.05□□□□□ -0.32
SCRN3-212ENST00000548868 RIOX1Q9H6W3 641 aa13.05□□□□□ -0.32
SCRN3-212ENST00000548868 GPCPD1Q9NPB8 672 aa13.05□□□□□ -0.32
SCRN3-212ENST00000548868 ISY1Q9ULR0 285 aaKnown RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms