RNA–Protein interactions for RNA: ENST00000548863.1

CNOT2-215, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 3

Gene CNOT2, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-215ENST00000548863 KIR2DL1P43626 348 aaPredicted RBP8.21□□□□□ -1.1
CNOT2-215ENST00000548863 KIR2DL2P43627 348 aaPredicted RBP8.21□□□□□ -1.1
CNOT2-215ENST00000548863 RNF4P78317 190 aa8.21□□□□□ -1.1
CNOT2-215ENST00000548863 MLECQ14165 292 aa8.21□□□□□ -1.1
CNOT2-215ENST00000548863 ZNF655Q8N720 491 aaPredicted RBP8.21□□□□□ -1.1
CNOT2-215ENST00000548863 LRRC3Q9BY71 257 aa8.21□□□□□ -1.1
CNOT2-215ENST00000548863 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.21□□□□□ -1.1
CNOT2-215ENST00000548863 CRTAC1Q9NQ79 661 aa8.21□□□□□ -1.1
CNOT2-215ENST00000548863 SLC22A31A6NKX4 558 aa8.2□□□□□ -1.1
CNOT2-215ENST00000548863 UBOX5O94941 541 aa8.2□□□□□ -1.1
CNOT2-215ENST00000548863 PDE6BP35913 854 aa8.2□□□□□ -1.1
CNOT2-215ENST00000548863 SNAP47Q5SQN1 464 aa8.2□□□□□ -1.1
CNOT2-215ENST00000548863 OR14I1A6ND48 311 aa8.19□□□□□ -1.1
CNOT2-215ENST00000548863 NRDCO43847 1150 aa8.19□□□□□ -1.1
CNOT2-215ENST00000548863 HOXA5P20719 270 aa8.19□□□□□ -1.1
CNOT2-215ENST00000548863 CTSWP56202 376 aa8.19□□□□□ -1.1
CNOT2-215ENST00000548863 FAM160A1Q05DH4 1040 aa8.19□□□□□ -1.1
CNOT2-215ENST00000548863 ZNF385BQ569K4 471 aa8.19□□□□□ -1.1
CNOT2-215ENST00000548863 TMEM132EQ6IEE7 984 aa8.19□□□□□ -1.1
CNOT2-215ENST00000548863 ERMP1Q7Z2K6 904 aa8.19□□□□□ -1.1
CNOT2-215ENST00000548863 LINC00116Q8NCU8 138 aa8.19□□□□□ -1.1
CNOT2-215ENST00000548863 C20orf173Q96LM9 149 aa8.19□□□□□ -1.1
CNOT2-215ENST00000548863 PARD6AQ9NPB6 346 aa8.19□□□□□ -1.1
CNOT2-215ENST00000548863 CNOT6Q9ULM6 557 aaKnown RBP8.19□□□□□ -1.1
CNOT2-215ENST00000548863 GREM1O60565 184 aa8.18□□□□□ -1.1
CNOT2-215ENST00000548863 RAD51AP2Q09MP3 1159 aa8.18□□□□□ -1.1
CNOT2-215ENST00000548863 CWF19L2Q2TBE0 894 aaKnown RBP8.18□□□□□ -1.1
CNOT2-215ENST00000548863 NBPF9Q3BBW0 867 aa8.18□□□□□ -1.1
CNOT2-215ENST00000548863 CDCP2Q5VXM1 449 aa8.18□□□□□ -1.1
CNOT2-215ENST00000548863 FBXO27Q8NI29 283 aa8.18□□□□□ -1.1
CNOT2-215ENST00000548863 TCTN2Q96GX1 697 aa8.18□□□□□ -1.1
CNOT2-215ENST00000548863 MAP6Q96JE9 813 aa8.18□□□□□ -1.1
CNOT2-215ENST00000548863 GMIPQ9P107 970 aa8.18□□□□□ -1.1
CNOT2-215ENST00000548863 TMEM82A0PJX8 343 aa8.17□□□□□ -1.1
CNOT2-215ENST00000548863 MINDY4BA8MYZ0 360 aa8.17□□□□□ -1.1
CNOT2-215ENST00000548863 EFEMP2O95967 443 aa8.17□□□□□ -1.1
CNOT2-215ENST00000548863 ERCC3P19447 782 aa8.17□□□□□ -1.1
CNOT2-215ENST00000548863 RPL10P27635 214 aaKnown RBP8.17□□□□□ -1.1
CNOT2-215ENST00000548863 CHMP4BP1P59074 171 aa8.17□□□□□ -1.1
CNOT2-215ENST00000548863 NBPF12Q5TAG4 269 aaPredicted RBP8.17□□□□□ -1.1
CNOT2-215ENST00000548863 TMEM151BQ8IW70 566 aa8.17□□□□□ -1.1
CNOT2-215ENST00000548863 MRS2Q9HD23 443 aa8.17□□□□□ -1.1
CNOT2-215ENST00000548863 TCFL5Q9UL49 500 aa8.17□□□□□ -1.1
CNOT2-215ENST00000548863 RAG1P15918 1043 aa8.16□□□□□ -1.1
CNOT2-215ENST00000548863 CCNFP41002 786 aa8.16□□□□□ -1.1
CNOT2-215ENST00000548863 PCBP3P57721 371 aaKnown RBP8.16□□□□□ -1.1
CNOT2-215ENST00000548863 ARSHQ5FYA8 562 aa8.16□□□□□ -1.1
CNOT2-215ENST00000548863 TCERG1LQ5VWI1 586 aa8.16□□□□□ -1.1
CNOT2-215ENST00000548863 FBXL19Q6PCT2 694 aa8.16□□□□□ -1.1
CNOT2-215ENST00000548863 WAPLQ7Z5K2 1190 aa8.16□□□□□ -1.1
CNOT2-215ENST00000548863 KCNC2Q96PR1 638 aa8.16□□□□□ -1.1
CNOT2-215ENST00000548863 SGPP1Q9BX95 441 aa8.16□□□□□ -1.1
CNOT2-215ENST00000548863 EHMT1Q9H9B1 1298 aa8.16□□□□□ -1.1
CNOT2-215ENST00000548863 VTI1BQ9UEU0 232 aa8.16□□□□□ -1.1
CNOT2-215ENST00000548863 KCTD3Q9Y597 815 aa8.16□□□□□ -1.1
CNOT2-215ENST00000548863 ADAMTS20P59510 1910 aa8.15□□□□□ -1.1
CNOT2-215ENST00000548863 RFXAPO00287 272 aa8.15□□□□□ -1.1
CNOT2-215ENST00000548863 KRTAP9-3Q9BYQ3 159 aa8.15□□□□□ -1.1
CNOT2-215ENST00000548863 FOXP3Q9BZS1 431 aa8.15□□□□□ -1.1
CNOT2-215ENST00000548863 KBTBD4Q9NVX7 518 aa8.15□□□□□ -1.1
CNOT2-215ENST00000548863 MBD1Q9UIS9 605 aaPredicted RBP8.15□□□□□ -1.1
CNOT2-215ENST00000548863 ZMYM5Q9UJ78 669 aa8.15□□□□□ -1.1
CNOT2-215ENST00000548863 SUPT16HQ9Y5B9 1047 aaKnown RBP8.15□□□□□ -1.1
CNOT2-215ENST00000548863 USP2O75604 605 aaPredicted RBP8.14□□□□□ -1.11
CNOT2-215ENST00000548863 PNLIPP16233 465 aa8.14□□□□□ -1.11
CNOT2-215ENST00000548863 YBX1P67809 324 aaKnown RBP8.14□□□□□ -1.11
CNOT2-215ENST00000548863 SLC14A2Q15849 920 aa8.14□□□□□ -1.11
CNOT2-215ENST00000548863 ADGRF1Q5T601 910 aa8.14□□□□□ -1.11
CNOT2-215ENST00000548863 MARCH10Q8NA82 808 aaPredicted RBP8.14□□□□□ -1.11
CNOT2-215ENST00000548863 HHIPL1Q96JK4 782 aa8.14□□□□□ -1.11
CNOT2-215ENST00000548863 SIGLEC10Q96LC7 697 aa8.14□□□□□ -1.11
CNOT2-215ENST00000548863 CNNM2Q9H8M5 875 aa8.14□□□□□ -1.11
CNOT2-215ENST00000548863 PCDHB14Q9Y5E9 798 aa8.14□□□□□ -1.11
CNOT2-215ENST00000548863 EIF4A3P38919 411 aaKnown RBP8.13□□□□□ -1.11
CNOT2-215ENST00000548863 BUD31P41223 144 aaPredicted RBP8.13□□□□□ -1.11
CNOT2-215ENST00000548863 GALK1P51570 392 aa8.13□□□□□ -1.11
CNOT2-215ENST00000548863 BBS9Q3SYG4 887 aa8.13□□□□□ -1.11
CNOT2-215ENST00000548863 CEP128Q6ZU80 1094 aa8.13□□□□□ -1.11
CNOT2-215ENST00000548863 TMC3Q7Z5M5 1100 aa8.13□□□□□ -1.11
CNOT2-215ENST00000548863 BRMS1Q9HCU9 246 aa8.13□□□□□ -1.11
CNOT2-215ENST00000548863 TNFRSF10DQ9UBN6 386 aa8.13□□□□□ -1.11
CNOT2-215ENST00000548863 ABLIM1O14639 778 aa8.12□□□□□ -1.11
CNOT2-215ENST00000548863 SIGLEC6O43699 453 aa8.12□□□□□ -1.11
CNOT2-215ENST00000548863 BMP7P18075 431 aa8.12□□□□□ -1.11
CNOT2-215ENST00000548863 ERVFRD-1P60508 538 aa8.12□□□□□ -1.11
CNOT2-215ENST00000548863 SRSF3P84103 164 aaKnown RBP8.12□□□□□ -1.11
CNOT2-215ENST00000548863 TAGLNQ01995 201 aaKnown RBP8.12□□□□□ -1.11
CNOT2-215ENST00000548863 SSPNQ14714 243 aa8.12□□□□□ -1.11
CNOT2-215ENST00000548863 SIRT2Q8IXJ6 389 aa8.12□□□□□ -1.11
CNOT2-215ENST00000548863 REXO1Q8N1G1 1221 aaKnown RBP8.12□□□□□ -1.11
CNOT2-215ENST00000548863 RELTQ969Z4 430 aa8.12□□□□□ -1.11
CNOT2-215ENST00000548863 KRTAP4-5Q9BYR2 181 aa8.12□□□□□ -1.11
CNOT2-215ENST00000548863 ZCCHC4Q9H5U6 513 aa8.12□□□□□ -1.11
CNOT2-215ENST00000548863 SSU72P8A0A1W2PR75 194 aa8.11□□□□□ -1.11
CNOT2-215ENST00000548863 N4BP3O15049 544 aa8.11□□□□□ -1.11
CNOT2-215ENST00000548863 TLR3O15455 904 aaKnown RBP8.11□□□□□ -1.11
CNOT2-215ENST00000548863 ENDOUP21128 410 aaKnown RBP8.11□□□□□ -1.11
CNOT2-215ENST00000548863 RTP1P59025 263 aa8.11□□□□□ -1.11
CNOT2-215ENST00000548863 SNW1Q13573 536 aaKnown RBP8.11□□□□□ -1.11
CNOT2-215ENST00000548863 ATG4CQ96DT6 458 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms