RNA–Protein interactions for RNA: ENST00000548420.1

PTCH1-217, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-217ENST00000548420 USP17L2Q6R6M4 530 aa17.18■□□□□ 0.34
PTCH1-217ENST00000548420 MAML3Q96JK9 1138 aa17.18■□□□□ 0.34
PTCH1-217ENST00000548420 MOV10L1Q9BXT6 1211 aaKnown RBP17.18■□□□□ 0.34
PTCH1-217ENST00000548420 TECTAO75443 2155 aa17.18■□□□□ 0.34
PTCH1-217ENST00000548420 ZNFX1Q9P2E3 1918 aaKnown RBP17.17■□□□□ 0.34
PTCH1-217ENST00000548420 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.17■□□□□ 0.34
PTCH1-217ENST00000548420 SPDYE16A6NNV3 312 aaPredicted RBP17.17■□□□□ 0.34
PTCH1-217ENST00000548420 GNAI2P04899 355 aa17.17■□□□□ 0.34
PTCH1-217ENST00000548420 KLHDC9Q8NEP7 349 aa17.17■□□□□ 0.34
PTCH1-217ENST00000548420 C12orf42Q96LP6 360 aa17.17■□□□□ 0.34
PTCH1-217ENST00000548420 TSEN34Q9BSV6 310 aaKnown RBP17.17■□□□□ 0.34
PTCH1-217ENST00000548420 HERC5Q9UII4 1024 aaKnown RBP17.17■□□□□ 0.34
PTCH1-217ENST00000548420 CACNA1HO95180 2353 aa17.17■□□□□ 0.34
PTCH1-217ENST00000548420 MROH7-TTC4A0A0A0MT08 1334 aa17.17■□□□□ 0.34
PTCH1-217ENST00000548420 MYADML2A6NDP7 307 aa17.16■□□□□ 0.34
PTCH1-217ENST00000548420 PHKA1P46020 1223 aa17.16■□□□□ 0.34
PTCH1-217ENST00000548420 TCF15Q12870 199 aa17.16■□□□□ 0.34
PTCH1-217ENST00000548420 ZYXQ15942 572 aaKnown RBP17.16■□□□□ 0.34
PTCH1-217ENST00000548420 SAMD1Q6SPF0 538 aaPredicted RBP17.16■□□□□ 0.34
PTCH1-217ENST00000548420 FAM126BQ8IXS8 530 aa17.16■□□□□ 0.34
PTCH1-217ENST00000548420 ARNTL2Q8WYA1 636 aa17.16■□□□□ 0.34
PTCH1-217ENST00000548420 LPIN2Q92539 896 aa17.16■□□□□ 0.34
PTCH1-217ENST00000548420 RCAN3Q9UKA8 241 aa17.16■□□□□ 0.34
PTCH1-217ENST00000548420 ZBTB21Q9ULJ3 1066 aa17.16■□□□□ 0.34
PTCH1-217ENST00000548420 SLC4A7Q9Y6M7 1214 aa17.16■□□□□ 0.34
PTCH1-217ENST00000548420 STRNO43815 780 aa17.15■□□□□ 0.34
PTCH1-217ENST00000548420 ZNF865P0CJ78 1059 aaPredicted RBP17.15■□□□□ 0.34
PTCH1-217ENST00000548420 KCNA10Q16322 511 aa17.15■□□□□ 0.34
PTCH1-217ENST00000548420 FTSJ3Q8IY81 847 aaKnown RBP17.15■□□□□ 0.34
PTCH1-217ENST00000548420 NUP133Q8WUM0 1156 aa17.15■□□□□ 0.34
PTCH1-217ENST00000548420 MTIF3Q9H2K0 278 aaKnown RBP17.15■□□□□ 0.34
PTCH1-217ENST00000548420 UBE2ZQ9H832 354 aaPredicted RBP17.15■□□□□ 0.34
PTCH1-217ENST00000548420 EPG5Q9HCE0 2579 aa17.15■□□□□ 0.34
PTCH1-217ENST00000548420 COL4A4P53420 1690 aaPredicted RBP17.14■□□□□ 0.33
PTCH1-217ENST00000548420 SRGAP3O43295 1099 aa17.14■□□□□ 0.33
PTCH1-217ENST00000548420 ERCC3P19447 782 aa17.14■□□□□ 0.33
PTCH1-217ENST00000548420 IL15P40933 162 aaPredicted RBP17.14■□□□□ 0.33
PTCH1-217ENST00000548420 TAP1Q03518 808 aa17.14■□□□□ 0.33
PTCH1-217ENST00000548420 LEXMQ3ZCV2 418 aa17.14■□□□□ 0.33
PTCH1-217ENST00000548420 DZIP1Q86YF9 867 aaKnown RBP17.14■□□□□ 0.33
PTCH1-217ENST00000548420 ALG13Q9NP73 1137 aaKnown RBP17.14■□□□□ 0.33
PTCH1-217ENST00000548420 FAM86C1Q9NVL1 165 aa17.14■□□□□ 0.33
PTCH1-217ENST00000548420 DENND2AQ9ULE3 1009 aa17.14■□□□□ 0.33
PTCH1-217ENST00000548420 PA2G4Q9UQ80 394 aaKnown RBP17.14■□□□□ 0.33
PTCH1-217ENST00000548420 RIF1Q5UIP0 2472 aaKnown RBP17.14■□□□□ 0.33
PTCH1-217ENST00000548420 KMT2BQ9UMN6 2715 aaPredicted RBP17.14■□□□□ 0.33
PTCH1-217ENST00000548420 SYNRGQ9UMZ2 1314 aa17.14■□□□□ 0.33
PTCH1-217ENST00000548420 CD4P01730 458 aa17.13■□□□□ 0.33
PTCH1-217ENST00000548420 MS4A1P11836 297 aa17.13■□□□□ 0.33
PTCH1-217ENST00000548420 ATP2A2P16615 1042 aaKnown RBP17.13■□□□□ 0.33
PTCH1-217ENST00000548420 TMEM67Q5HYA8 995 aa17.13■□□□□ 0.33
PTCH1-217ENST00000548420 ROBO3Q96MS0 1386 aa17.13■□□□□ 0.33
PTCH1-217ENST00000548420 PNMA6EA0A0J9YXQ4 647 aa17.12■□□□□ 0.33
PTCH1-217ENST00000548420 MOXD2PA6NHM9 499 aa17.12■□□□□ 0.33
PTCH1-217ENST00000548420 ARVCFO00192 962 aa17.12■□□□□ 0.33
PTCH1-217ENST00000548420 VCAM1P19320 739 aa17.12■□□□□ 0.33
PTCH1-217ENST00000548420 PTPN5P54829 565 aa17.12■□□□□ 0.33
PTCH1-217ENST00000548420 CCL23P55773 120 aa17.12■□□□□ 0.33
PTCH1-217ENST00000548420 MECOMQ03112 1051 aa17.12■□□□□ 0.33
PTCH1-217ENST00000548420 POLA2Q14181 598 aa17.12■□□□□ 0.33
PTCH1-217ENST00000548420 METTL16Q86W50 562 aaKnown RBP17.12■□□□□ 0.33
PTCH1-217ENST00000548420 ITPRIPQ8IWB1 547 aa17.12■□□□□ 0.33
PTCH1-217ENST00000548420 PANK1Q8TE04 598 aa17.12■□□□□ 0.33
PTCH1-217ENST00000548420 MFSD14AQ96MC6 490 aa17.12■□□□□ 0.33
PTCH1-217ENST00000548420 SIL1Q9H173 461 aa17.12■□□□□ 0.33
PTCH1-217ENST00000548420 WNT8AQ9H1J5 351 aa17.12■□□□□ 0.33
PTCH1-217ENST00000548420 CEP126Q9P2H0 1117 aa17.12■□□□□ 0.33
PTCH1-217ENST00000548420 PI4KBQ9UBF8 816 aa17.12■□□□□ 0.33
PTCH1-217ENST00000548420 ABCF2Q9UG63 623 aa17.12■□□□□ 0.33
PTCH1-217ENST00000548420 NRBP1Q9UHY1 535 aa17.12■□□□□ 0.33
PTCH1-217ENST00000548420 ELP1O95163 1332 aa17.12■□□□□ 0.33
PTCH1-217ENST00000548420 MROH7Q68CQ1 1323 aa17.12■□□□□ 0.33
PTCH1-217ENST00000548420 GRXCR2A6NFK2 248 aa17.11■□□□□ 0.33
PTCH1-217ENST00000548420 ZBTB22O15209 634 aa17.11■□□□□ 0.33
PTCH1-217ENST00000548420 ATP8B2P98198 1209 aa17.11■□□□□ 0.33
PTCH1-217ENST00000548420 ERMP1Q7Z2K6 904 aa17.11■□□□□ 0.33
PTCH1-217ENST00000548420 PLXNA3P51805 1871 aa17.11■□□□□ 0.33
PTCH1-217ENST00000548420 CDK5RAP2Q96SN8 1893 aa17.11■□□□□ 0.33
PTCH1-217ENST00000548420 ZBBXA8MT70 800 aa17.1■□□□□ 0.33
PTCH1-217ENST00000548420 KCNA5P22460 613 aa17.1■□□□□ 0.33
PTCH1-217ENST00000548420 TTLL4Q14679 1199 aa17.1■□□□□ 0.33
PTCH1-217ENST00000548420 PTCRAQ6ISU1 281 aaPredicted RBP17.1■□□□□ 0.33
PTCH1-217ENST00000548420 ACER1Q8TDN7 264 aa17.1■□□□□ 0.33
PTCH1-217ENST00000548420 SSH3Q8TE77 659 aa17.1■□□□□ 0.33
PTCH1-217ENST00000548420 SPATC1LQ9H0A9 340 aa17.1■□□□□ 0.33
PTCH1-217ENST00000548420 FAM186AA6NE01 2351 aa17.1■□□□□ 0.33
PTCH1-217ENST00000548420 MYO15AQ9UKN7 3530 aa17.09■□□□□ 0.33
PTCH1-217ENST00000548420 SEMA3EO15041 775 aa17.09■□□□□ 0.33
PTCH1-217ENST00000548420 RGS20O76081 388 aa17.09■□□□□ 0.33
PTCH1-217ENST00000548420 AKR1A1P14550 325 aa17.09■□□□□ 0.33
PTCH1-217ENST00000548420 RASGRF1Q13972 1273 aa17.09■□□□□ 0.33
PTCH1-217ENST00000548420 SLF2Q8IX21 1173 aa17.09■□□□□ 0.33
PTCH1-217ENST00000548420 SHCBP1Q8NEM2 672 aa17.09■□□□□ 0.33
PTCH1-217ENST00000548420 GLT1D1Q96MS3 346 aa17.09■□□□□ 0.33
PTCH1-217ENST00000548420 GNL3LQ9NVN8 582 aaKnown RBP17.09■□□□□ 0.33
PTCH1-217ENST00000548420 BAHCC1Q9P281 2608 aa17.09■□□□□ 0.33
PTCH1-217ENST00000548420 ASGR1P07306 291 aa17.08■□□□□ 0.32
PTCH1-217ENST00000548420 ADORA1P30542 326 aa17.08■□□□□ 0.32
PTCH1-217ENST00000548420 MVPQ14764 893 aaKnown RBP17.08■□□□□ 0.32
PTCH1-217ENST00000548420 ATP2B3Q16720 1220 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms