RNA–Protein interactions for RNA: ENST00000548097.5

KRT4-201, Transcript of keratin 4, humanhuman

TSL 1 (best)

Gene KRT4, Length 1,839 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4-201ENST00000548097 VCAM1P19320 739 aa20■□□□□ 0.79
KRT4-201ENST00000548097 SLC16A2P36021 539 aa20■□□□□ 0.79
KRT4-201ENST00000548097 GRM4Q14833 912 aa20■□□□□ 0.79
KRT4-201ENST00000548097 NBPF11Q86T75 865 aa20■□□□□ 0.79
KRT4-201ENST00000548097 HSCBQ8IWL3 235 aa20■□□□□ 0.79
KRT4-201ENST00000548097 UBA5Q9GZZ9 404 aa20■□□□□ 0.79
KRT4-201ENST00000548097 CREBZFQ9NS37 354 aa20■□□□□ 0.79
KRT4-201ENST00000548097 A0A0G2JLL6 359 aaPredicted RBP19.99■□□□□ 0.79
KRT4-201ENST00000548097 K7ELQ4 463 aaPredicted RBP19.99■□□□□ 0.79
KRT4-201ENST00000548097 PFKFB2O60825 505 aa19.99■□□□□ 0.79
KRT4-201ENST00000548097 SNHG28P0DPA3 235 aa19.99■□□□□ 0.79
KRT4-201ENST00000548097 RTN1Q16799 776 aa19.99■□□□□ 0.79
KRT4-201ENST00000548097 PRRT2Q7Z6L0 340 aaPredicted RBP19.99■□□□□ 0.79
KRT4-201ENST00000548097 SPRYD3Q8NCJ5 442 aa19.99■□□□□ 0.79
KRT4-201ENST00000548097 ZIC5Q96T25 663 aa19.99■□□□□ 0.79
KRT4-201ENST00000548097 FOXD4L1Q9NU39 408 aa19.99■□□□□ 0.79
KRT4-201ENST00000548097 TMOD4Q9NZQ9 345 aa19.99■□□□□ 0.79
KRT4-201ENST00000548097 FAM155AB1AL88 458 aaPredicted RBP19.99■□□□□ 0.79
KRT4-201ENST00000548097 C19orf81C9J6K1 198 aa19.99■□□□□ 0.79
KRT4-201ENST00000548097 CXCL11O14625 94 aa19.99■□□□□ 0.79
KRT4-201ENST00000548097 PARP1P09874 1014 aaKnown RBP19.99■□□□□ 0.79
KRT4-201ENST00000548097 BMP3P12645 472 aa19.99■□□□□ 0.79
KRT4-201ENST00000548097 USP14P54578 494 aa19.99■□□□□ 0.79
KRT4-201ENST00000548097 ZNF543Q08ER8 600 aa19.99■□□□□ 0.79
KRT4-201ENST00000548097 MOGSQ13724 837 aa19.99■□□□□ 0.79
KRT4-201ENST00000548097 CTCFLQ8NI51 663 aaPredicted RBP19.99■□□□□ 0.79
KRT4-201ENST00000548097 MS4A4AQ96JQ5 239 aa19.99■□□□□ 0.79
KRT4-201ENST00000548097 RPAP3Q9H6T3 665 aaPredicted RBP19.99■□□□□ 0.79
KRT4-201ENST00000548097 FBXO28Q9NVF7 368 aa19.99■□□□□ 0.79
KRT4-201ENST00000548097 TMEM232C9JQI7 657 aa19.98■□□□□ 0.79
KRT4-201ENST00000548097 SLC10A3P09131 477 aa19.98■□□□□ 0.79
KRT4-201ENST00000548097 MCM2P49736 904 aa19.98■□□□□ 0.79
KRT4-201ENST00000548097 SNAPC2Q13487 334 aa19.98■□□□□ 0.79
KRT4-201ENST00000548097 SLC35G1Q2M3R5 365 aa19.98■□□□□ 0.79
KRT4-201ENST00000548097 SH3D19Q5HYK7 790 aa19.98■□□□□ 0.79
KRT4-201ENST00000548097 PIBF1Q8WXW3 757 aa19.98■□□□□ 0.79
KRT4-201ENST00000548097 GTF3C6Q969F1 213 aa19.98■□□□□ 0.79
KRT4-201ENST00000548097 GMCL1Q96IK5 515 aa19.98■□□□□ 0.79
KRT4-201ENST00000548097 PALM3A6NDB9 673 aaPredicted RBP19.97■□□□□ 0.79
KRT4-201ENST00000548097 CALM1P0DP23 149 aa19.97■□□□□ 0.79
KRT4-201ENST00000548097 CALM2P0DP24 149 aa19.97■□□□□ 0.79
KRT4-201ENST00000548097 CALM3P0DP25 149 aa19.97■□□□□ 0.79
KRT4-201ENST00000548097 ANP32AP39687 249 aaKnown RBP19.97■□□□□ 0.79
KRT4-201ENST00000548097 DEFB115Q30KQ5 88 aa19.97■□□□□ 0.79
KRT4-201ENST00000548097 DCAF4Q8WV16 495 aa19.97■□□□□ 0.79
KRT4-201ENST00000548097 ZSCAN31Q96LW9 406 aaPredicted RBP19.97■□□□□ 0.79
KRT4-201ENST00000548097 TANGO6Q9C0B7 1094 aa19.97■□□□□ 0.79
KRT4-201ENST00000548097 SYNPO2Q9UMS6 1093 aa19.97■□□□□ 0.79
KRT4-201ENST00000548097 CCL15-CCL14A0A0B4J2E2 113 aa19.97■□□□□ 0.79
KRT4-201ENST00000548097 hCG_1642624A0A1W2PR95 340 aa19.97■□□□□ 0.79
KRT4-201ENST00000548097 KLRF2D3W0D1 207 aa19.97■□□□□ 0.79
KRT4-201ENST00000548097 ZBTB48P10074 688 aaPredicted RBP19.97■□□□□ 0.79
KRT4-201ENST00000548097 SNAP25P60880 206 aa19.97■□□□□ 0.79
KRT4-201ENST00000548097 IKQ13123 557 aaPredicted RBP19.97■□□□□ 0.79
KRT4-201ENST00000548097 CCL15Q16663 113 aa19.97■□□□□ 0.79
KRT4-201ENST00000548097 SRBD1Q8N5C6 995 aaKnown RBP19.97■□□□□ 0.79
KRT4-201ENST00000548097 BRI3BPQ8WY22 251 aa19.97■□□□□ 0.79
KRT4-201ENST00000548097 C12orf42Q96LP6 360 aa19.97■□□□□ 0.79
KRT4-201ENST00000548097 VAT1LQ9HCJ6 419 aa19.97■□□□□ 0.79
KRT4-201ENST00000548097 CTDNEP1O95476 244 aa19.96■□□□□ 0.79
KRT4-201ENST00000548097 LPAR1Q92633 364 aa19.96■□□□□ 0.79
KRT4-201ENST00000548097 PHKBQ93100 1093 aa19.96■□□□□ 0.79
KRT4-201ENST00000548097 BAZ2BQ9UIF8 2168 aaKnown RBP19.96■□□□□ 0.79
KRT4-201ENST00000548097 LOC285556D6RIA3 1793 aa19.95■□□□□ 0.78
KRT4-201ENST00000548097 WDR46O15213 610 aaKnown RBP19.95■□□□□ 0.78
KRT4-201ENST00000548097 AOC2O75106 756 aa19.95■□□□□ 0.78
KRT4-201ENST00000548097 GTF2A2P52657 109 aa19.95■□□□□ 0.78
KRT4-201ENST00000548097 ASPRV1Q53RT3 343 aa19.95■□□□□ 0.78
KRT4-201ENST00000548097 SH2B1Q9NRF2 756 aaPredicted RBP19.95■□□□□ 0.78
KRT4-201ENST00000548097 RASSF10A6NK89 507 aa19.95■□□□□ 0.78
KRT4-201ENST00000548097 CYTH3O43739 400 aa19.95■□□□□ 0.78
KRT4-201ENST00000548097 JAK2O60674 1132 aa19.95■□□□□ 0.78
KRT4-201ENST00000548097 KIF5BP33176 963 aa19.95■□□□□ 0.78
KRT4-201ENST00000548097 GPAT2Q6NUI2 795 aa19.95■□□□□ 0.78
KRT4-201ENST00000548097 TMTC3Q6ZXV5 915 aa19.95■□□□□ 0.78
KRT4-201ENST00000548097 KIFC2Q96AC6 838 aa19.95■□□□□ 0.78
KRT4-201ENST00000548097 HHIPL1Q96JK4 782 aa19.95■□□□□ 0.78
KRT4-201ENST00000548097 PTPN18Q99952 460 aa19.95■□□□□ 0.78
KRT4-201ENST00000548097 PCNTO95613 3336 aa19.94■□□□□ 0.78
KRT4-201ENST00000548097 NID2Q14112 1375 aa19.94■□□□□ 0.78
KRT4-201ENST00000548097 DHX16O60231 1041 aaKnown RBP19.94■□□□□ 0.78
KRT4-201ENST00000548097 CETPP11597 493 aa19.94■□□□□ 0.78
KRT4-201ENST00000548097 C1QTNF8P60827 252 aa19.94■□□□□ 0.78
KRT4-201ENST00000548097 NTRK3Q16288 839 aa19.94■□□□□ 0.78
KRT4-201ENST00000548097 GPATCH4Q5T3I0 446 aaKnown RBP19.94■□□□□ 0.78
KRT4-201ENST00000548097 IL27Q8NEV9 243 aa19.94■□□□□ 0.78
KRT4-201ENST00000548097 CCDC102AQ96A19 550 aa19.94■□□□□ 0.78
KRT4-201ENST00000548097 CAPNS2Q96L46 248 aa19.94■□□□□ 0.78
KRT4-201ENST00000548097 MAP3K14Q99558 947 aa19.94■□□□□ 0.78
KRT4-201ENST00000548097 RBM28Q9NW13 759 aaKnown RBP19.94■□□□□ 0.78
KRT4-201ENST00000548097 BTBD19C9JJ37 291 aa19.93■□□□□ 0.78
KRT4-201ENST00000548097 CPLX1O14810 134 aa19.93■□□□□ 0.78
KRT4-201ENST00000548097 FLOT1O75955 427 aa19.93■□□□□ 0.78
KRT4-201ENST00000548097 RCAN1P53805 252 aa19.93■□□□□ 0.78
KRT4-201ENST00000548097 FAM43AQ8N2R8 423 aa19.93■□□□□ 0.78
KRT4-201ENST00000548097 PROCA1Q8NCQ7 364 aaPredicted RBP19.93■□□□□ 0.78
KRT4-201ENST00000548097 DDX11Q96FC9 970 aa19.93■□□□□ 0.78
KRT4-201ENST00000548097 AGTPBP1Q9UPW5 1226 aa19.93■□□□□ 0.78
KRT4-201ENST00000548097 PEX10O60683 326 aa19.92■□□□□ 0.78
KRT4-201ENST00000548097 STAT2P52630 851 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms