RNA–Protein interactions for RNA: ENST00000548080.5

HDAC7-227, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-227ENST00000548080 ESR2Q92731 530 aa20.36■□□□□ 0.85
HDAC7-227ENST00000548080 KRT23Q9C075 422 aa20.36■□□□□ 0.85
HDAC7-227ENST00000548080 PRDM10Q9NQV6 1147 aa20.36■□□□□ 0.85
HDAC7-227ENST00000548080 PNMA3Q9UL41 463 aa20.36■□□□□ 0.85
HDAC7-227ENST00000548080 WDR19Q8NEZ3 1342 aa20.35■□□□□ 0.85
HDAC7-227ENST00000548080 USP17L15C9J2P7 530 aa20.35■□□□□ 0.85
HDAC7-227ENST00000548080 USP17L13C9JLJ4 530 aa20.35■□□□□ 0.85
HDAC7-227ENST00000548080 USP17L11C9JVI0 530 aa20.35■□□□□ 0.85
HDAC7-227ENST00000548080 USP17L18D6R9N7 530 aa20.35■□□□□ 0.85
HDAC7-227ENST00000548080 USP17L22D6RA61 530 aa20.35■□□□□ 0.85
HDAC7-227ENST00000548080 USP17L17D6RBQ6 530 aa20.35■□□□□ 0.85
HDAC7-227ENST00000548080 USP17L19D6RCP7 530 aa20.35■□□□□ 0.85
HDAC7-227ENST00000548080 USP17L20D6RJB6 530 aa20.35■□□□□ 0.85
HDAC7-227ENST00000548080 HOXA7P31268 230 aaPredicted RBP20.35■□□□□ 0.85
HDAC7-227ENST00000548080 FGD1P98174 961 aa20.35■□□□□ 0.85
HDAC7-227ENST00000548080 USP17L24Q0WX57 530 aa20.35■□□□□ 0.85
HDAC7-227ENST00000548080 CUL4AQ13619 759 aa20.35■□□□□ 0.85
HDAC7-227ENST00000548080 FAM83BQ5T0W9 1011 aa20.35■□□□□ 0.85
HDAC7-227ENST00000548080 C17orf99Q6UX52 265 aa20.35■□□□□ 0.85
HDAC7-227ENST00000548080 CYB5R4Q7L1T6 521 aa20.35■□□□□ 0.85
HDAC7-227ENST00000548080 ANKRD13CQ8N6S4 541 aa20.35■□□□□ 0.85
HDAC7-227ENST00000548080 ARHGAP39Q9C0H5 1083 aa20.35■□□□□ 0.85
HDAC7-227ENST00000548080 GOPCQ9HD26 462 aa20.35■□□□□ 0.85
HDAC7-227ENST00000548080 NDUFB10O96000 172 aa20.34■□□□□ 0.85
HDAC7-227ENST00000548080 PCP11498 1178 aaKnown RBP20.34■□□□□ 0.85
HDAC7-227ENST00000548080 HERVK_113P62684 666 aa20.34■□□□□ 0.85
HDAC7-227ENST00000548080 SP3Q02447 781 aa20.34■□□□□ 0.85
HDAC7-227ENST00000548080 CATSPERGQ6ZRH7 1159 aa20.34■□□□□ 0.85
HDAC7-227ENST00000548080 LARP6Q9BRS8 491 aaKnown RBP20.34■□□□□ 0.85
HDAC7-227ENST00000548080 ZSWIM5Q9P217 1185 aa20.34■□□□□ 0.85
HDAC7-227ENST00000548080 F5H6K3 240 aa20.33■□□□□ 0.85
HDAC7-227ENST00000548080 PRC1O43663 620 aa20.33■□□□□ 0.85
HDAC7-227ENST00000548080 BCRP11274 1271 aa20.33■□□□□ 0.85
HDAC7-227ENST00000548080 ANTXR2P58335 489 aa20.33■□□□□ 0.85
HDAC7-227ENST00000548080 KLRC3Q07444 240 aa20.33■□□□□ 0.85
HDAC7-227ENST00000548080 POTEEQ6S8J3 1075 aa20.33■□□□□ 0.85
HDAC7-227ENST00000548080 CHST3Q7LGC8 479 aa20.33■□□□□ 0.85
HDAC7-227ENST00000548080 FBXL16Q8N461 479 aa20.33■□□□□ 0.85
HDAC7-227ENST00000548080 PAGR1Q9BTK6 254 aa20.33■□□□□ 0.85
HDAC7-227ENST00000548080 LRRC2Q9BYS8 371 aa20.33■□□□□ 0.85
HDAC7-227ENST00000548080 AGXT2Q9BYV1 514 aa20.33■□□□□ 0.85
HDAC7-227ENST00000548080 SLKQ9H2G2 1235 aaPredicted RBP20.33■□□□□ 0.85
HDAC7-227ENST00000548080 SH2B1Q9NRF2 756 aaPredicted RBP20.33■□□□□ 0.85
HDAC7-227ENST00000548080 FOXD4L1Q9NU39 408 aa20.33■□□□□ 0.85
HDAC7-227ENST00000548080 FBXO28Q9NVF7 368 aa20.33■□□□□ 0.85
HDAC7-227ENST00000548080 ISY1Q9ULR0 285 aaKnown RBP20.33■□□□□ 0.85
HDAC7-227ENST00000548080 RLFQ13129 1914 aa20.33■□□□□ 0.85
HDAC7-227ENST00000548080 PARP14Q460N5 1801 aa20.33■□□□□ 0.84
HDAC7-227ENST00000548080 RCSD1Q6JBY9 416 aa20.32■□□□□ 0.84
HDAC7-227ENST00000548080 LPAR1Q92633 364 aa20.32■□□□□ 0.84
HDAC7-227ENST00000548080 MKL1Q969V6 931 aa20.32■□□□□ 0.84
HDAC7-227ENST00000548080 TMEM47Q9BQJ4 181 aa20.32■□□□□ 0.84
HDAC7-227ENST00000548080 TXNRD2Q9NNW7 524 aa20.32■□□□□ 0.84
HDAC7-227ENST00000548080 TPCN1Q9ULQ1 816 aa20.32■□□□□ 0.84
HDAC7-227ENST00000548080 WDR46O15213 610 aaKnown RBP20.31■□□□□ 0.84
HDAC7-227ENST00000548080 FLOT1O75955 427 aa20.31■□□□□ 0.84
HDAC7-227ENST00000548080 CTGFP29279 349 aa20.31■□□□□ 0.84
HDAC7-227ENST00000548080 SLFN13Q68D06 897 aa20.31■□□□□ 0.84
HDAC7-227ENST00000548080 BRF1Q92994 677 aa20.31■□□□□ 0.84
HDAC7-227ENST00000548080 TCP11L1Q9NUJ3 509 aa20.31■□□□□ 0.84
HDAC7-227ENST00000548080 SPDYE16A6NNV3 312 aaPredicted RBP20.3■□□□□ 0.84
HDAC7-227ENST00000548080 NOM1Q5C9Z4 860 aaKnown RBP20.3■□□□□ 0.84
HDAC7-227ENST00000548080 INTS4Q96HW7 963 aaKnown RBP20.3■□□□□ 0.84
HDAC7-227ENST00000548080 LACTBP83111 547 aaPredicted RBP20.3■□□□□ 0.84
HDAC7-227ENST00000548080 ME3Q16798 604 aa20.3■□□□□ 0.84
HDAC7-227ENST00000548080 ATG4CQ96DT6 458 aa20.3■□□□□ 0.84
HDAC7-227ENST00000548080 TMEM87BQ96K49 555 aa20.3■□□□□ 0.84
HDAC7-227ENST00000548080 ZSCAN10Q96SZ4 725 aaPredicted RBP20.3■□□□□ 0.84
HDAC7-227ENST00000548080 RBPJLQ9UBG7 517 aa20.3■□□□□ 0.84
HDAC7-227ENST00000548080 TNKSO95271 1327 aa20.3■□□□□ 0.84
HDAC7-227ENST00000548080 COL11A1P12107 1806 aaPredicted RBP20.29■□□□□ 0.84
HDAC7-227ENST00000548080 CNMDO75829 334 aa20.29■□□□□ 0.84
HDAC7-227ENST00000548080 LARGE1O95461 756 aa20.29■□□□□ 0.84
HDAC7-227ENST00000548080 NOVP48745 357 aa20.29■□□□□ 0.84
HDAC7-227ENST00000548080 KCTD1Q719H9 257 aa20.29■□□□□ 0.84
HDAC7-227ENST00000548080 IQCA1Q86XH1 822 aa20.29■□□□□ 0.84
HDAC7-227ENST00000548080 ENAHQ8N8S7 591 aaPredicted RBP20.29■□□□□ 0.84
HDAC7-227ENST00000548080 GMCL1P1Q8NEA9 526 aa20.29■□□□□ 0.84
HDAC7-227ENST00000548080 ERO1AQ96HE7 468 aa20.29■□□□□ 0.84
HDAC7-227ENST00000548080 CWC22Q9HCG8 908 aaKnown RBP20.29■□□□□ 0.84
HDAC7-227ENST00000548080 MGAMO43451 1857 aa20.28■□□□□ 0.84
HDAC7-227ENST00000548080 TOP1P11387 765 aaKnown RBP20.28■□□□□ 0.84
HDAC7-227ENST00000548080 DDIT3P35638 169 aa20.28■□□□□ 0.84
HDAC7-227ENST00000548080 GCLCP48506 637 aaPredicted RBP20.28■□□□□ 0.84
HDAC7-227ENST00000548080 COG2Q14746 738 aa20.28■□□□□ 0.84
HDAC7-227ENST00000548080 Q3C1V9 767 aa20.28■□□□□ 0.84
HDAC7-227ENST00000548080 PPP4R3BQ5MIZ7 849 aa20.28■□□□□ 0.84
HDAC7-227ENST00000548080 UBAC1Q9BSL1 405 aa20.28■□□□□ 0.84
HDAC7-227ENST00000548080 MTA3Q9BTC8 594 aa20.28■□□□□ 0.84
HDAC7-227ENST00000548080 SENP2Q9HC62 589 aa20.28■□□□□ 0.84
HDAC7-227ENST00000548080 BTBD7Q9P203 1132 aa20.28■□□□□ 0.84
HDAC7-227ENST00000548080 TRIM17Q9Y577 477 aa20.28■□□□□ 0.84
HDAC7-227ENST00000548080 BMP3P12645 472 aa20.27■□□□□ 0.84
HDAC7-227ENST00000548080 DSG3P32926 999 aa20.27■□□□□ 0.84
HDAC7-227ENST00000548080 PSMC4P43686 418 aa20.27■□□□□ 0.84
HDAC7-227ENST00000548080 NT5C2P49902 561 aa20.27■□□□□ 0.84
HDAC7-227ENST00000548080 EVCP57679 992 aa20.27■□□□□ 0.84
HDAC7-227ENST00000548080 APOBRQ0VD83 1088 aa20.27■□□□□ 0.84
HDAC7-227ENST00000548080 FAM110CQ1W6H9 321 aa20.27■□□□□ 0.84
HDAC7-227ENST00000548080 CCDC96Q2M329 555 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms