RNA–Protein interactions for RNA: ENST00000547955.5

TPCN1-210, Transcript of two pore segment channel 1, humanhuman

TSL 5

Gene TPCN1, Length 609 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPCN1-210ENST00000547955 CTCFLQ8NI51 663 aaPredicted RBP13.04□□□□□ -0.32
TPCN1-210ENST00000547955 DCAF4Q8WV16 495 aa13.04□□□□□ -0.32
TPCN1-210ENST00000547955 ZNF274Q96GC6 653 aaPredicted RBP13.04□□□□□ -0.32
TPCN1-210ENST00000547955 SLKQ9H2G2 1235 aaPredicted RBP13.04□□□□□ -0.32
TPCN1-210ENST00000547955 NCOA5Q9HCD5 579 aaKnown RBP13.04□□□□□ -0.32
TPCN1-210ENST00000547955 GPCPD1Q9NPB8 672 aa13.04□□□□□ -0.32
TPCN1-210ENST00000547955 HPS5Q9UPZ3 1129 aa13.04□□□□□ -0.32
TPCN1-210ENST00000547955 KCNH4Q9UQ05 1017 aa13.04□□□□□ -0.32
TPCN1-210ENST00000547955 RBM19Q9Y4C8 960 aaKnown RBP13.04□□□□□ -0.32
TPCN1-210ENST00000547955 A0A0G2JLL6 359 aaPredicted RBP13.03□□□□□ -0.32
TPCN1-210ENST00000547955 CXCL11O14625 94 aa13.03□□□□□ -0.32
TPCN1-210ENST00000547955 PARP1P09874 1014 aaKnown RBP13.03□□□□□ -0.32
TPCN1-210ENST00000547955 ZBTB48P10074 688 aaPredicted RBP13.03□□□□□ -0.32
TPCN1-210ENST00000547955 BMP3P12645 472 aa13.03□□□□□ -0.32
TPCN1-210ENST00000547955 VCAM1P19320 739 aa13.03□□□□□ -0.32
TPCN1-210ENST00000547955 MCM2P49736 904 aa13.03□□□□□ -0.32
TPCN1-210ENST00000547955 EVCP57679 992 aa13.03□□□□□ -0.32
TPCN1-210ENST00000547955 SCRN1Q12765 414 aa13.03□□□□□ -0.32
TPCN1-210ENST00000547955 SNAPC2Q13487 334 aa13.03□□□□□ -0.32
TPCN1-210ENST00000547955 SAMD1Q6SPF0 538 aaPredicted RBP13.03□□□□□ -0.32
TPCN1-210ENST00000547955 PRRT2Q7Z6L0 340 aaPredicted RBP13.03□□□□□ -0.32
TPCN1-210ENST00000547955 STAG2Q8N3U4 1231 aa13.03□□□□□ -0.32
TPCN1-210ENST00000547955 FANCBQ8NB91 859 aa13.03□□□□□ -0.32
TPCN1-210ENST00000547955 IL27Q8NEV9 243 aa13.03□□□□□ -0.32
TPCN1-210ENST00000547955 SNX21Q969T3 373 aa13.03□□□□□ -0.32
TPCN1-210ENST00000547955 ZSCAN31Q96LW9 406 aaPredicted RBP13.03□□□□□ -0.32
TPCN1-210ENST00000547955 MAD2L2Q9UI95 211 aa13.03□□□□□ -0.32
TPCN1-210ENST00000547955 SYNPO2Q9UMS6 1093 aa13.03□□□□□ -0.32
TPCN1-210ENST00000547955 K7ELQ4 463 aaPredicted RBP13.02□□□□□ -0.33
TPCN1-210ENST00000547955 WDR46O15213 610 aaKnown RBP13.02□□□□□ -0.33
TPCN1-210ENST00000547955 PFKFB2O60825 505 aa13.02□□□□□ -0.33
TPCN1-210ENST00000547955 DTNBO60941 627 aa13.02□□□□□ -0.33
TPCN1-210ENST00000547955 CDC27P30260 824 aa13.02□□□□□ -0.33
TPCN1-210ENST00000547955 KIF5BP33176 963 aa13.02□□□□□ -0.33
TPCN1-210ENST00000547955 ANP32AP39687 249 aaKnown RBP13.02□□□□□ -0.33
TPCN1-210ENST00000547955 GTF2A2P52657 109 aa13.02□□□□□ -0.33
TPCN1-210ENST00000547955 ZNF543Q08ER8 600 aa13.02□□□□□ -0.33
TPCN1-210ENST00000547955 IKQ13123 557 aaPredicted RBP13.02□□□□□ -0.33
TPCN1-210ENST00000547955 DEFB115Q30KQ5 88 aa13.02□□□□□ -0.33
TPCN1-210ENST00000547955 SH3D19Q5HYK7 790 aa13.02□□□□□ -0.33
TPCN1-210ENST00000547955 TREML2Q5T2D2 321 aa13.02□□□□□ -0.33
TPCN1-210ENST00000547955 IFFO2Q5TF58 517 aa13.02□□□□□ -0.33
TPCN1-210ENST00000547955 TTBK2Q6IQ55 1244 aa13.02□□□□□ -0.33
TPCN1-210ENST00000547955 CCDC83Q8IWF9 413 aa13.02□□□□□ -0.33
TPCN1-210ENST00000547955 CMTR1Q8N1G2 835 aaKnown RBP13.02□□□□□ -0.33
TPCN1-210ENST00000547955 LPAR1Q92633 364 aa13.02□□□□□ -0.33
TPCN1-210ENST00000547955 GMCL1Q96IK5 515 aa13.02□□□□□ -0.33
TPCN1-210ENST00000547955 TMX3Q96JJ7 454 aa13.02□□□□□ -0.33
TPCN1-210ENST00000547955 HHIPL1Q96JK4 782 aa13.02□□□□□ -0.33
TPCN1-210ENST00000547955 TANGO6Q9C0B7 1094 aa13.02□□□□□ -0.33
TPCN1-210ENST00000547955 CPVLQ9H3G5 476 aa13.02□□□□□ -0.33
TPCN1-210ENST00000547955 RPAP3Q9H6T3 665 aaPredicted RBP13.02□□□□□ -0.33
TPCN1-210ENST00000547955 SH2B1Q9NRF2 756 aaPredicted RBP13.02□□□□□ -0.33
TPCN1-210ENST00000547955 CCL15-CCL14A0A0B4J2E2 113 aa13.01□□□□□ -0.33
TPCN1-210ENST00000547955 FAM155AB1AL88 458 aaPredicted RBP13.01□□□□□ -0.33
TPCN1-210ENST00000547955 TMEM232C9JQI7 657 aa13.01□□□□□ -0.33
TPCN1-210ENST00000547955 PPFIA3O75145 1194 aa13.01□□□□□ -0.33
TPCN1-210ENST00000547955 PLEKHA8P1O95397 391 aa13.01□□□□□ -0.33
TPCN1-210ENST00000547955 SNHG28P0DPA3 235 aa13.01□□□□□ -0.33
TPCN1-210ENST00000547955 ADD1P35611 737 aaKnown RBP13.01□□□□□ -0.33
TPCN1-210ENST00000547955 SLC16A2P36021 539 aa13.01□□□□□ -0.33
TPCN1-210ENST00000547955 ST3GAL1Q11201 340 aa13.01□□□□□ -0.33
TPCN1-210ENST00000547955 CCL15Q16663 113 aa13.01□□□□□ -0.33
TPCN1-210ENST00000547955 ASPRV1Q53RT3 343 aa13.01□□□□□ -0.33
TPCN1-210ENST00000547955 CCDC82Q8N4S0 544 aa13.01□□□□□ -0.33
TPCN1-210ENST00000547955 GTF3C6Q969F1 213 aa13.01□□□□□ -0.33
TPCN1-210ENST00000547955 CCDC102AQ96A19 550 aa13.01□□□□□ -0.33
TPCN1-210ENST00000547955 C12orf42Q96LP6 360 aa13.01□□□□□ -0.33
TPCN1-210ENST00000547955 MAP3K14Q99558 947 aa13.01□□□□□ -0.33
TPCN1-210ENST00000547955 UBA5Q9GZZ9 404 aa13.01□□□□□ -0.33
TPCN1-210ENST00000547955 RBM28Q9NW13 759 aaKnown RBP13.01□□□□□ -0.33
TPCN1-210ENST00000547955 NID2Q14112 1375 aa13.01□□□□□ -0.33
TPCN1-210ENST00000547955 A0A0G2JMZ2 1700 aa13□□□□□ -0.33
TPCN1-210ENST00000547955 PALM3A6NDB9 673 aaPredicted RBP13□□□□□ -0.33
TPCN1-210ENST00000547955 RASSF10A6NK89 507 aa13□□□□□ -0.33
TPCN1-210ENST00000547955 KLRF2D3W0D1 207 aa13□□□□□ -0.33
TPCN1-210ENST00000547955 CPLX1O14810 134 aa13□□□□□ -0.33
TPCN1-210ENST00000547955 DHX16O60231 1041 aaKnown RBP13□□□□□ -0.33
TPCN1-210ENST00000547955 CETPP11597 493 aa13□□□□□ -0.33
TPCN1-210ENST00000547955 RCAN1P53805 252 aa13□□□□□ -0.33
TPCN1-210ENST00000547955 MOGSQ13724 837 aa13□□□□□ -0.33
TPCN1-210ENST00000547955 GPATCH4Q5T3I0 446 aaKnown RBP13□□□□□ -0.33
TPCN1-210ENST00000547955 TMTC3Q6ZXV5 915 aa13□□□□□ -0.33
TPCN1-210ENST00000547955 FASTKD5Q7L8L6 764 aaKnown RBP13□□□□□ -0.33
TPCN1-210ENST00000547955 PROCA1Q8NCQ7 364 aaPredicted RBP13□□□□□ -0.33
TPCN1-210ENST00000547955 PIBF1Q8WXW3 757 aa13□□□□□ -0.33
TPCN1-210ENST00000547955 MS4A4AQ96JQ5 239 aa13□□□□□ -0.33
TPCN1-210ENST00000547955 CAPNS2Q96L46 248 aa13□□□□□ -0.33
TPCN1-210ENST00000547955 FAM217BQ9NTX9 383 aaPredicted RBP13□□□□□ -0.33
TPCN1-210ENST00000547955 FBXO28Q9NVF7 368 aa13□□□□□ -0.33
TPCN1-210ENST00000547955 AGTPBP1Q9UPW5 1226 aa13□□□□□ -0.33
TPCN1-210ENST00000547955 SMCHD1A6NHR9 2005 aa13□□□□□ -0.33
TPCN1-210ENST00000547955 MANSC4A6NHS7 340 aaPredicted RBP12.99□□□□□ -0.33
TPCN1-210ENST00000547955 AOC2O75106 756 aa12.99□□□□□ -0.33
TPCN1-210ENST00000547955 FLOT1O75955 427 aa12.99□□□□□ -0.33
TPCN1-210ENST00000547955 STAT2P52630 851 aa12.99□□□□□ -0.33
TPCN1-210ENST00000547955 BECN1Q14457 450 aa12.99□□□□□ -0.33
TPCN1-210ENST00000547955 NBPF11Q86T75 865 aa12.99□□□□□ -0.33
TPCN1-210ENST00000547955 SRBD1Q8N5C6 995 aaKnown RBP12.99□□□□□ -0.33
TPCN1-210ENST00000547955 SPRYD3Q8NCJ5 442 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms