RNA–Protein interactions for RNA: ENST00000547758.1

CCDC59-202, Transcript of coiled-coil domain containing 59, humanhuman

TSL 2

Gene CCDC59, Length 553 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-202ENST00000547758 MROH8Q9H579 483 aa16.4■□□□□ 0.22
CCDC59-202ENST00000547758 XPNPEP3Q9NQH7 507 aa16.4■□□□□ 0.22
CCDC59-202ENST00000547758 TRPC6Q9Y210 931 aa16.4■□□□□ 0.22
CCDC59-202ENST00000547758 GBF1Q92538 1859 aa16.39■□□□□ 0.22
CCDC59-202ENST00000547758 A0A1W2PRG0 241 aa16.39■□□□□ 0.21
CCDC59-202ENST00000547758 PQBP1O60828 265 aaKnown RBP16.39■□□□□ 0.21
CCDC59-202ENST00000547758 RARBP10826 455 aa16.39■□□□□ 0.21
CCDC59-202ENST00000547758 PLS1Q14651 629 aa16.39■□□□□ 0.21
CCDC59-202ENST00000547758 RNF180Q86T96 592 aa16.39■□□□□ 0.21
CCDC59-202ENST00000547758 DBNLQ9UJU6 430 aaKnown RBP16.39■□□□□ 0.21
CCDC59-202ENST00000547758 ROBO3Q96MS0 1386 aa16.38■□□□□ 0.21
CCDC59-202ENST00000547758 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.38■□□□□ 0.21
CCDC59-202ENST00000547758 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.38■□□□□ 0.21
CCDC59-202ENST00000547758 MPHOSPH10O00566 681 aaKnown RBP16.38■□□□□ 0.21
CCDC59-202ENST00000547758 ZNF576Q9H609 170 aa16.38■□□□□ 0.21
CCDC59-202ENST00000547758 BMP2KQ9NSY1 1161 aaPredicted RBP16.38■□□□□ 0.21
CCDC59-202ENST00000547758 TMEM39AQ9NV64 488 aa16.38■□□□□ 0.21
CCDC59-202ENST00000547758 NRBP1Q9UHY1 535 aa16.38■□□□□ 0.21
CCDC59-202ENST00000547758 BAZ2AQ9UIF9 1905 aaKnown RBP16.38■□□□□ 0.21
CCDC59-202ENST00000547758 A0A1W2PQ45 241 aaPredicted RBP16.37■□□□□ 0.21
CCDC59-202ENST00000547758 A0A1W2PQY0 241 aa16.37■□□□□ 0.21
CCDC59-202ENST00000547758 PGK1P00558 417 aa16.37■□□□□ 0.21
CCDC59-202ENST00000547758 POLR3DP05423 398 aaPredicted RBP16.37■□□□□ 0.21
CCDC59-202ENST00000547758 FCER1AP12319 257 aa16.37■□□□□ 0.21
CCDC59-202ENST00000547758 TRIM27P14373 513 aa16.37■□□□□ 0.21
CCDC59-202ENST00000547758 GABPAQ06546 454 aa16.37■□□□□ 0.21
CCDC59-202ENST00000547758 TIFAQ96CG3 184 aa16.37■□□□□ 0.21
CCDC59-202ENST00000547758 ATG4CQ96DT6 458 aa16.37■□□□□ 0.21
CCDC59-202ENST00000547758 TLR7Q9NYK1 1049 aaKnown RBP16.37■□□□□ 0.21
CCDC59-202ENST00000547758 MCM3APO60318 1980 aa16.37■□□□□ 0.21
CCDC59-202ENST00000547758 BDP1A6H8Y1 2624 aa16.36■□□□□ 0.21
CCDC59-202ENST00000547758 FLOT1O75955 427 aa16.36■□□□□ 0.21
CCDC59-202ENST00000547758 MAP3K12Q12852 859 aa16.36■□□□□ 0.21
CCDC59-202ENST00000547758 KIAA1755Q5JYT7 1200 aa16.36■□□□□ 0.21
CCDC59-202ENST00000547758 TMED8Q6PL24 325 aaPredicted RBP16.36■□□□□ 0.21
CCDC59-202ENST00000547758 TNNQ9UQP3 1299 aa16.36■□□□□ 0.21
CCDC59-202ENST00000547758 IPO8O15397 1037 aaKnown RBP16.35■□□□□ 0.21
CCDC59-202ENST00000547758 SURF6O75683 361 aaKnown RBP16.35■□□□□ 0.21
CCDC59-202ENST00000547758 FAAP100Q0VG06 881 aa16.35■□□□□ 0.21
CCDC59-202ENST00000547758 ANKRD33Q7Z3H0 272 aa16.35■□□□□ 0.21
CCDC59-202ENST00000547758 SSH3Q8TE77 659 aa16.35■□□□□ 0.21
CCDC59-202ENST00000547758 GAS2L1Q99501 681 aaPredicted RBP16.35■□□□□ 0.21
CCDC59-202ENST00000547758 RIOK1Q9BRS2 568 aaKnown RBP16.35■□□□□ 0.21
CCDC59-202ENST00000547758 CCDC8Q9H0W5 538 aaPredicted RBP16.35■□□□□ 0.21
CCDC59-202ENST00000547758 ANTXR1Q9H6X2 564 aa16.35■□□□□ 0.21
CCDC59-202ENST00000547758 RAPGEFL1Q9UHV5 662 aa16.35■□□□□ 0.21
CCDC59-202ENST00000547758 TCF20Q9UGU0 1960 aaKnown RBP16.35■□□□□ 0.21
CCDC59-202ENST00000547758 CHD9Q3L8U1 2897 aa16.34■□□□□ 0.21
CCDC59-202ENST00000547758 DCDC2CA8MYV0 355 aa16.34■□□□□ 0.21
CCDC59-202ENST00000547758 SLC25A27O95847 323 aa16.34■□□□□ 0.21
CCDC59-202ENST00000547758 AKR1A1P14550 325 aa16.34■□□□□ 0.21
CCDC59-202ENST00000547758 TMEM179Q6ZVK1 233 aa16.34■□□□□ 0.21
CCDC59-202ENST00000547758 SLC44A5Q8NCS7 719 aa16.34■□□□□ 0.21
CCDC59-202ENST00000547758 ATXN2LQ8WWM7 1075 aaKnown RBP16.34■□□□□ 0.21
CCDC59-202ENST00000547758 PPM1EQ8WY54 764 aa16.34■□□□□ 0.21
CCDC59-202ENST00000547758 LENG1Q96BZ8 264 aaPredicted RBP16.34■□□□□ 0.21
CCDC59-202ENST00000547758 TOX2Q96NM4 488 aa16.34■□□□□ 0.21
CCDC59-202ENST00000547758 MMP19Q99542 508 aa16.34■□□□□ 0.21
CCDC59-202ENST00000547758 TINF2Q9BSI4 451 aa16.34■□□□□ 0.21
CCDC59-202ENST00000547758 MCM9Q9NXL9 1143 aa16.34■□□□□ 0.21
CCDC59-202ENST00000547758 ZBTB47Q9UFB7 747 aaPredicted RBP16.34■□□□□ 0.21
CCDC59-202ENST00000547758 MAGEB6P1A0A0J9YX57 407 aa16.33■□□□□ 0.2
CCDC59-202ENST00000547758 ADAMTS4O75173 837 aa16.33■□□□□ 0.2
CCDC59-202ENST00000547758 PGK2P07205 417 aa16.33■□□□□ 0.2
CCDC59-202ENST00000547758 TAL1P17542 331 aaPredicted RBP16.33■□□□□ 0.2
CCDC59-202ENST00000547758 ATP8B2P98198 1209 aa16.33■□□□□ 0.2
CCDC59-202ENST00000547758 TMEM132BQ14DG7 1078 aa16.33■□□□□ 0.2
CCDC59-202ENST00000547758 SPICE1Q8N0Z3 855 aa16.33■□□□□ 0.2
CCDC59-202ENST00000547758 CLUAP1Q96AJ1 413 aa16.33■□□□□ 0.2
CCDC59-202ENST00000547758 EAF2Q96CJ1 260 aaPredicted RBP16.33■□□□□ 0.2
CCDC59-202ENST00000547758 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.33■□□□□ 0.2
CCDC59-202ENST00000547758 TSEN34Q9BSV6 310 aaKnown RBP16.33■□□□□ 0.2
CCDC59-202ENST00000547758 ARHGEF10LQ9HCE6 1279 aa16.33■□□□□ 0.2
CCDC59-202ENST00000547758 STARD7Q9NQZ5 370 aa16.33■□□□□ 0.2
CCDC59-202ENST00000547758 THEGQ9P2T0 379 aa16.33■□□□□ 0.2
CCDC59-202ENST00000547758 ZNF316A6NFI3 1004 aaPredicted RBP16.32■□□□□ 0.2
CCDC59-202ENST00000547758 BCAR3O75815 825 aa16.32■□□□□ 0.2
CCDC59-202ENST00000547758 TIMP1P01033 207 aa16.32■□□□□ 0.2
CCDC59-202ENST00000547758 ZNF865P0CJ78 1059 aaPredicted RBP16.32■□□□□ 0.2
CCDC59-202ENST00000547758 NUBP1P53384 320 aa16.32■□□□□ 0.2
CCDC59-202ENST00000547758 ACLYP53396 1101 aa16.32■□□□□ 0.2
CCDC59-202ENST00000547758 KCTD2Q14681 263 aa16.32■□□□□ 0.2
CCDC59-202ENST00000547758 ZNF792Q3KQV3 632 aa16.32■□□□□ 0.2
CCDC59-202ENST00000547758 AKNAD1Q5T1N1 836 aa16.32■□□□□ 0.2
CCDC59-202ENST00000547758 CLEC10AQ8IUN9 316 aa16.32■□□□□ 0.2
CCDC59-202ENST00000547758 NUP133Q8WUM0 1156 aa16.32■□□□□ 0.2
CCDC59-202ENST00000547758 FRAT1Q92837 279 aaPredicted RBP16.32■□□□□ 0.2
CCDC59-202ENST00000547758 ASB2Q96Q27 587 aa16.32■□□□□ 0.2
CCDC59-202ENST00000547758 PBX4Q9BYU1 374 aa16.32■□□□□ 0.2
CCDC59-202ENST00000547758 CRNKL1Q9BZJ0 848 aaKnown RBP16.32■□□□□ 0.2
CCDC59-202ENST00000547758 SH2D4AQ9H788 454 aa16.32■□□□□ 0.2
CCDC59-202ENST00000547758 VCPKMTQ9H867 229 aa16.32■□□□□ 0.2
CCDC59-202ENST00000547758 TBX21Q9UL17 535 aa16.32■□□□□ 0.2
CCDC59-202ENST00000547758 DIS3Q9Y2L1 958 aaKnown RBP16.32■□□□□ 0.2
CCDC59-202ENST00000547758 NOP58Q9Y2X3 529 aaKnown RBP16.32■□□□□ 0.2
CCDC59-202ENST00000547758 TMX2Q9Y320 296 aa16.32■□□□□ 0.2
CCDC59-202ENST00000547758 CHD7Q9P2D1 2997 aa16.31■□□□□ 0.2
CCDC59-202ENST00000547758 SYNRGQ9UMZ2 1314 aa16.31■□□□□ 0.2
CCDC59-202ENST00000547758 MOXD2PA6NHM9 499 aa16.31■□□□□ 0.2
CCDC59-202ENST00000547758 WDR46O15213 610 aaKnown RBP16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms