RNA–Protein interactions for RNA: ENST00000547693.5

CACNB3-206, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 4

Gene CACNB3, Length 477 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-206ENST00000547693 MAD2L2Q9UI95 211 aa12.1□□□□□ -0.47
CACNB3-206ENST00000547693 ISY1Q9ULR0 285 aaKnown RBP12.1□□□□□ -0.47
CACNB3-206ENST00000547693 ATAD5Q96QE3 1844 aa12.09□□□□□ -0.47
CACNB3-206ENST00000547693 STX6O43752 255 aa12.09□□□□□ -0.47
CACNB3-206ENST00000547693 JAK2O60674 1132 aa12.09□□□□□ -0.47
CACNB3-206ENST00000547693 BMP3P12645 472 aa12.09□□□□□ -0.47
CACNB3-206ENST00000547693 PTPRAP18433 802 aa12.09□□□□□ -0.47
CACNB3-206ENST00000547693 SYT1P21579 422 aa12.09□□□□□ -0.47
CACNB3-206ENST00000547693 DDIT3P35638 169 aa12.09□□□□□ -0.47
CACNB3-206ENST00000547693 JAG1P78504 1218 aa12.09□□□□□ -0.47
CACNB3-206ENST00000547693 ZNF543Q08ER8 600 aa12.09□□□□□ -0.47
CACNB3-206ENST00000547693 TRAF1Q13077 416 aa12.09□□□□□ -0.47
CACNB3-206ENST00000547693 USP17L2Q6R6M4 530 aa12.09□□□□□ -0.47
CACNB3-206ENST00000547693 FAM177A1Q8N128 213 aaPredicted RBP12.09□□□□□ -0.47
CACNB3-206ENST00000547693 CCDC82Q8N4S0 544 aa12.09□□□□□ -0.47
CACNB3-206ENST00000547693 C2orf69Q8N8R5 385 aa12.09□□□□□ -0.47
CACNB3-206ENST00000547693 ZNF280CQ8ND82 737 aa12.09□□□□□ -0.47
CACNB3-206ENST00000547693 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.09□□□□□ -0.47
CACNB3-206ENST00000547693 CHURC1Q8WUH1 139 aa12.09□□□□□ -0.47
CACNB3-206ENST00000547693 PHKBQ93100 1093 aa12.09□□□□□ -0.47
CACNB3-206ENST00000547693 ZKSCAN4Q969J2 545 aaPredicted RBP12.09□□□□□ -0.47
CACNB3-206ENST00000547693 RRP36Q96EU6 259 aaKnown RBP12.09□□□□□ -0.47
CACNB3-206ENST00000547693 C8orf76Q96K31 380 aa12.09□□□□□ -0.47
CACNB3-206ENST00000547693 SPZ1Q9BXG8 430 aa12.09□□□□□ -0.47
CACNB3-206ENST00000547693 KIAA1683Q9H0B3 1180 aa12.09□□□□□ -0.47
CACNB3-206ENST00000547693 VCPKMTQ9H867 229 aa12.09□□□□□ -0.47
CACNB3-206ENST00000547693 SEC63Q9UGP8 760 aaKnown RBP12.09□□□□□ -0.47
CACNB3-206ENST00000547693 ATP6V1DQ9Y5K8 247 aa12.09□□□□□ -0.47
CACNB3-206ENST00000547693 V9GY48 417 aaPredicted RBP12.09□□□□□ -0.47
CACNB3-206ENST00000547693 TNRC18O15417 2968 aaPredicted RBP12.08□□□□□ -0.48
CACNB3-206ENST00000547693 IKQ13123 557 aaPredicted RBP12.08□□□□□ -0.48
CACNB3-206ENST00000547693 SAFBQ15424 915 aaKnown RBP eCLIP12.08□□□□□ -0.48
CACNB3-206ENST00000547693 FAM160B2Q86V87 743 aa12.08□□□□□ -0.48
CACNB3-206ENST00000547693 CLEC10AQ8IUN9 316 aa12.08□□□□□ -0.48
CACNB3-206ENST00000547693 SRBD1Q8N5C6 995 aaKnown RBP12.08□□□□□ -0.48
CACNB3-206ENST00000547693 ALG1Q9BT22 464 aa12.08□□□□□ -0.48
CACNB3-206ENST00000547693 GPCPD1Q9NPB8 672 aa12.08□□□□□ -0.48
CACNB3-206ENST00000547693 TMOD4Q9NZQ9 345 aa12.08□□□□□ -0.48
CACNB3-206ENST00000547693 ZHX2Q9Y6X8 837 aa12.08□□□□□ -0.48
CACNB3-206ENST00000547693 DOCK1Q14185 1865 aa12.08□□□□□ -0.48
CACNB3-206ENST00000547693 A0A1W2PRG0 241 aa12.07□□□□□ -0.48
CACNB3-206ENST00000547693 FOXN1O15353 648 aa12.07□□□□□ -0.48
CACNB3-206ENST00000547693 PLA2G6O60733 806 aa12.07□□□□□ -0.48
CACNB3-206ENST00000547693 PLEKHA8P1O95397 391 aa12.07□□□□□ -0.48
CACNB3-206ENST00000547693 NDUFB10O96000 172 aa12.07□□□□□ -0.48
CACNB3-206ENST00000547693 BACE1P56817 501 aa12.07□□□□□ -0.48
CACNB3-206ENST00000547693 PPATQ06203 517 aa12.07□□□□□ -0.48
CACNB3-206ENST00000547693 SPP2Q13103 211 aa12.07□□□□□ -0.48
CACNB3-206ENST00000547693 SHROOM1Q2M3G4 852 aaPredicted RBP12.07□□□□□ -0.48
CACNB3-206ENST00000547693 NBPF11Q86T75 865 aa12.07□□□□□ -0.48
CACNB3-206ENST00000547693 ERO1BQ86YB8 467 aa12.07□□□□□ -0.48
CACNB3-206ENST00000547693 STAG2Q8N3U4 1231 aa12.07□□□□□ -0.48
CACNB3-206ENST00000547693 ACER1Q8TDN7 264 aa12.07□□□□□ -0.48
CACNB3-206ENST00000547693 CCDC12Q8WUD4 166 aaPredicted RBP12.07□□□□□ -0.48
CACNB3-206ENST00000547693 SLC10A4Q96EP9 437 aa12.07□□□□□ -0.48
CACNB3-206ENST00000547693 ZSCAN16Q9H4T2 348 aaPredicted RBP12.07□□□□□ -0.48
CACNB3-206ENST00000547693 RIOX1Q9H6W3 641 aa12.07□□□□□ -0.48
CACNB3-206ENST00000547693 CREBZFQ9NS37 354 aa12.07□□□□□ -0.48
CACNB3-206ENST00000547693 FEM1BQ9UK73 627 aa12.07□□□□□ -0.48
CACNB3-206ENST00000547693 MYH6P13533 1939 aa12.07□□□□□ -0.48
CACNB3-206ENST00000547693 FRMPD2Q68DX3 1309 aaPredicted RBP12.07□□□□□ -0.48
CACNB3-206ENST00000547693 VPS37CA5D8V6 355 aaPredicted RBP12.06□□□□□ -0.48
CACNB3-206ENST00000547693 hCG_1984214I3L0E3 225 aa12.06□□□□□ -0.48
CACNB3-206ENST00000547693 WDR46O15213 610 aaKnown RBP12.06□□□□□ -0.48
CACNB3-206ENST00000547693 POTEIP0CG38 1075 aa12.06□□□□□ -0.48
CACNB3-206ENST00000547693 POTEJP0CG39 1038 aa12.06□□□□□ -0.48
CACNB3-206ENST00000547693 GOLGA8HP0CJ92 632 aa12.06□□□□□ -0.48
CACNB3-206ENST00000547693 ZSCAN22P10073 491 aaPredicted RBP12.06□□□□□ -0.48
CACNB3-206ENST00000547693 FDX1P10109 184 aa12.06□□□□□ -0.48
CACNB3-206ENST00000547693 FDPSP14324 419 aaKnown RBP12.06□□□□□ -0.48
CACNB3-206ENST00000547693 ECE1P42892 770 aa12.06□□□□□ -0.48
CACNB3-206ENST00000547693 RGS19P49795 217 aa12.06□□□□□ -0.48
CACNB3-206ENST00000547693 FUT2Q10981 343 aa12.06□□□□□ -0.48
CACNB3-206ENST00000547693 VGLL4Q14135 290 aa12.06□□□□□ -0.48
CACNB3-206ENST00000547693 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.06□□□□□ -0.48
CACNB3-206ENST00000547693 KCTD1Q719H9 257 aa12.06□□□□□ -0.48
CACNB3-206ENST00000547693 CMTR1Q8N1G2 835 aaKnown RBP12.06□□□□□ -0.48
CACNB3-206ENST00000547693 ZNF713Q8N859 430 aaPredicted RBP12.06□□□□□ -0.48
CACNB3-206ENST00000547693 FBXO18Q8NFZ0 1043 aa12.06□□□□□ -0.48
CACNB3-206ENST00000547693 ZNF408Q9H9D4 720 aa12.06□□□□□ -0.48
CACNB3-206ENST00000547693 GBA2Q9HCG7 927 aaPredicted RBP12.06□□□□□ -0.48
CACNB3-206ENST00000547693 VAT1LQ9HCJ6 419 aa12.06□□□□□ -0.48
CACNB3-206ENST00000547693 BRMS1Q9HCU9 246 aa12.06□□□□□ -0.48
CACNB3-206ENST00000547693 SH3GLB2Q9NR46 395 aa12.06□□□□□ -0.48
CACNB3-206ENST00000547693 PDE4DIPQ5VU43 2346 aa12.06□□□□□ -0.48
CACNB3-206ENST00000547693 PNMA6FA0A0J9YX94 578 aa12.05□□□□□ -0.48
CACNB3-206ENST00000547693 TMEM232C9JQI7 657 aa12.05□□□□□ -0.48
CACNB3-206ENST00000547693 CXCL11O14625 94 aa12.05□□□□□ -0.48
CACNB3-206ENST00000547693 CELF2O95319 508 aaKnown RBP12.05□□□□□ -0.48
CACNB3-206ENST00000547693 BRD1O95696 1058 aa12.05□□□□□ -0.48
CACNB3-206ENST00000547693 SCG2P13521 617 aa12.05□□□□□ -0.48
CACNB3-206ENST00000547693 CALML3P27482 149 aa12.05□□□□□ -0.48
CACNB3-206ENST00000547693 STAT2P52630 851 aa12.05□□□□□ -0.48
CACNB3-206ENST00000547693 GNL2Q13823 731 aaKnown RBP12.05□□□□□ -0.48
CACNB3-206ENST00000547693 ZYXQ15942 572 aaKnown RBP12.05□□□□□ -0.48
CACNB3-206ENST00000547693 PFKFB3Q16875 520 aaPredicted RBP12.05□□□□□ -0.48
CACNB3-206ENST00000547693 LDLRAD1Q5T700 205 aa12.05□□□□□ -0.48
CACNB3-206ENST00000547693 BTNL9Q6UXG8 535 aa12.05□□□□□ -0.48
CACNB3-206ENST00000547693 CCDC148Q8NFR7 591 aa12.05□□□□□ -0.48
CACNB3-206ENST00000547693 GBP4Q96PP9 640 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms