RNA–Protein interactions for RNA: ENST00000547562.5

BRF1-212, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 2,405 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-212ENST00000547562 CERS3Q8IU89 383 aa17.64■□□□□ 0.42
BRF1-212ENST00000547562 IQUBQ8NA54 791 aa17.64■□□□□ 0.42
BRF1-212ENST00000547562 SLC44A5Q8NCS7 719 aa17.64■□□□□ 0.42
BRF1-212ENST00000547562 ARID3AQ99856 593 aa17.64■□□□□ 0.42
BRF1-212ENST00000547562 PYM1Q9BRP8 204 aaKnown RBP17.64■□□□□ 0.42
BRF1-212ENST00000547562 CD209Q9NNX6 404 aa17.64■□□□□ 0.42
BRF1-212ENST00000547562 DDX60LQ5H9U9 1706 aaKnown RBP17.64■□□□□ 0.41
BRF1-212ENST00000547562 FAM205AQ6ZU69 1335 aa17.64■□□□□ 0.41
BRF1-212ENST00000547562 UFL1O94874 794 aa17.64■□□□□ 0.41
BRF1-212ENST00000547562 CD44P16070 742 aaKnown RBP17.64■□□□□ 0.41
BRF1-212ENST00000547562 GOLGA8FQ08AF8 430 aa17.64■□□□□ 0.41
BRF1-212ENST00000547562 GOLGA8DPQ0D2H9 430 aa17.64■□□□□ 0.41
BRF1-212ENST00000547562 SPATA1Q5VX52 437 aa17.64■□□□□ 0.41
BRF1-212ENST00000547562 ARL6IP4Q66PJ3 421 aaKnown RBP17.64■□□□□ 0.41
BRF1-212ENST00000547562 TMEM139Q8IV31 216 aa17.64■□□□□ 0.41
BRF1-212ENST00000547562 MAPKAPK5Q8IW41 473 aa17.64■□□□□ 0.41
BRF1-212ENST00000547562 SYNRGQ9UMZ2 1314 aa17.64■□□□□ 0.41
BRF1-212ENST00000547562 RASA1P20936 1047 aa17.63■□□□□ 0.41
BRF1-212ENST00000547562 ATP2B4P23634 1241 aa17.63■□□□□ 0.41
BRF1-212ENST00000547562 MYH1P12882 1939 aa17.63■□□□□ 0.41
BRF1-212ENST00000547562 IL1R1P14778 569 aa17.63■□□□□ 0.41
BRF1-212ENST00000547562 BTDP43251 543 aa17.63■□□□□ 0.41
BRF1-212ENST00000547562 NR1I3Q14994 352 aa17.63■□□□□ 0.41
BRF1-212ENST00000547562 FCHSD1Q86WN1 690 aa17.63■□□□□ 0.41
BRF1-212ENST00000547562 C4orf32Q8N8J7 132 aa17.63■□□□□ 0.41
BRF1-212ENST00000547562 SAP30BPQ9UHR5 308 aaKnown RBP17.63■□□□□ 0.41
BRF1-212ENST00000547562 A0A1B0GTH6 734 aa17.62■□□□□ 0.41
BRF1-212ENST00000547562 M0R2N6 131 aa17.62■□□□□ 0.41
BRF1-212ENST00000547562 ARHGAP6O43182 974 aa17.62■□□□□ 0.41
BRF1-212ENST00000547562 GYS1P13807 737 aa17.62■□□□□ 0.41
BRF1-212ENST00000547562 ST5P78524 1137 aa17.62■□□□□ 0.41
BRF1-212ENST00000547562 SLC35G1Q2M3R5 365 aa17.62■□□□□ 0.41
BRF1-212ENST00000547562 KLHL10Q6JEL2 608 aa17.62■□□□□ 0.41
BRF1-212ENST00000547562 TYW1BQ6NUM6 668 aa17.62■□□□□ 0.41
BRF1-212ENST00000547562 PDXDC2PQ6P474 469 aa17.62■□□□□ 0.41
BRF1-212ENST00000547562 TMEM47Q9BQJ4 181 aa17.62■□□□□ 0.41
BRF1-212ENST00000547562 ZNF287Q9HBT7 754 aa17.62■□□□□ 0.41
BRF1-212ENST00000547562 GGA1Q9UJY5 639 aa17.62■□□□□ 0.41
BRF1-212ENST00000547562 ZNF215Q9UL58 517 aaPredicted RBP17.62■□□□□ 0.41
BRF1-212ENST00000547562 STX8Q9UNK0 236 aa17.62■□□□□ 0.41
BRF1-212ENST00000547562 GPR75-ASB3A0A0A6YYF3 556 aa17.62■□□□□ 0.41
BRF1-212ENST00000547562 CYTH3O43739 400 aa17.62■□□□□ 0.41
BRF1-212ENST00000547562 LONP1P36776 959 aaKnown RBP17.62■□□□□ 0.41
BRF1-212ENST00000547562 NAA30Q147X3 362 aaPredicted RBP17.62■□□□□ 0.41
BRF1-212ENST00000547562 SYT10Q6XYQ8 523 aa17.62■□□□□ 0.41
BRF1-212ENST00000547562 BCL11BQ9C0K0 894 aaPredicted RBP17.62■□□□□ 0.41
BRF1-212ENST00000547562 PALM3A6NDB9 673 aaPredicted RBP17.61■□□□□ 0.41
BRF1-212ENST00000547562 PPP1R3GB7ZBB8 358 aa17.61■□□□□ 0.41
BRF1-212ENST00000547562 SERPINB2P05120 415 aa17.61■□□□□ 0.41
BRF1-212ENST00000547562 PPP4R3BQ5MIZ7 849 aa17.61■□□□□ 0.41
BRF1-212ENST00000547562 WWC2Q6AWC2 1192 aa17.61■□□□□ 0.41
BRF1-212ENST00000547562 TC2NQ8N9U0 490 aa17.61■□□□□ 0.41
BRF1-212ENST00000547562 DAGLBQ8NCG7 672 aa17.61■□□□□ 0.41
BRF1-212ENST00000547562 CCDC148Q8NFR7 591 aa17.61■□□□□ 0.41
BRF1-212ENST00000547562 STAMQ92783 540 aa17.61■□□□□ 0.41
BRF1-212ENST00000547562 RBM17Q96I25 401 aaKnown RBP17.61■□□□□ 0.41
BRF1-212ENST00000547562 STX17P56962 302 aa17.61■□□□□ 0.41
BRF1-212ENST00000547562 GALNT17Q6IS24 598 aa17.61■□□□□ 0.41
BRF1-212ENST00000547562 C16orf86Q6ZW13 317 aa17.61■□□□□ 0.41
BRF1-212ENST00000547562 APTXQ7Z2E3 356 aaKnown RBP17.61■□□□□ 0.41
BRF1-212ENST00000547562 SMYD4Q8IYR2 804 aaPredicted RBP17.61■□□□□ 0.41
BRF1-212ENST00000547562 RASGRP4Q8TDF6 673 aa17.61■□□□□ 0.41
BRF1-212ENST00000547562 SNED1Q8TER0 1413 aa17.61■□□□□ 0.41
BRF1-212ENST00000547562 BAG1Q99933 345 aaPredicted RBP17.61■□□□□ 0.41
BRF1-212ENST00000547562 CCDC194A0A1B0GVG4 234 aa17.6■□□□□ 0.41
BRF1-212ENST00000547562 GTPBP6O43824 516 aaPredicted RBP17.6■□□□□ 0.41
BRF1-212ENST00000547562 ONECUT3O60422 494 aaPredicted RBP17.6■□□□□ 0.41
BRF1-212ENST00000547562 CDKAL1Q5VV42 579 aa17.6■□□□□ 0.41
BRF1-212ENST00000547562 HOMER1Q86YM7 354 aa17.6■□□□□ 0.41
BRF1-212ENST00000547562 TEX11Q8IYF3 940 aa17.6■□□□□ 0.41
BRF1-212ENST00000547562 ERO1AQ96HE7 468 aa17.6■□□□□ 0.41
BRF1-212ENST00000547562 MTRQ99707 1265 aa17.6■□□□□ 0.41
BRF1-212ENST00000547562 LZTS2Q9BRK4 669 aa17.6■□□□□ 0.41
BRF1-212ENST00000547562 L2HGDHQ9H9P8 463 aa17.6■□□□□ 0.41
BRF1-212ENST00000547562 BARHL2Q9NY43 387 aa17.6■□□□□ 0.41
BRF1-212ENST00000547562 FOCADQ5VW36 1801 aa17.6■□□□□ 0.41
BRF1-212ENST00000547562 STXBP3O00186 592 aa17.6■□□□□ 0.41
BRF1-212ENST00000547562 STX10O60499 249 aa17.6■□□□□ 0.41
BRF1-212ENST00000547562 PLCG2P16885 1265 aa17.6■□□□□ 0.41
BRF1-212ENST00000547562 CDK8P49336 464 aa17.6■□□□□ 0.41
BRF1-212ENST00000547562 ETF1P62495 437 aaKnown RBP17.6■□□□□ 0.41
BRF1-212ENST00000547562 HEATR3Q7Z4Q2 680 aa17.6■□□□□ 0.41
BRF1-212ENST00000547562 REXO1L1PQ8IX06 675 aa17.6■□□□□ 0.41
BRF1-212ENST00000547562 BLZF1Q9H2G9 400 aa17.6■□□□□ 0.41
BRF1-212ENST00000547562 PCDHA6Q9UN73 950 aa17.6■□□□□ 0.41
BRF1-212ENST00000547562 PCDHA8Q9Y5H6 950 aa17.6■□□□□ 0.41
BRF1-212ENST00000547562 ZSCAN12O43309 604 aa17.59■□□□□ 0.41
BRF1-212ENST00000547562 BBOX1O75936 387 aa17.59■□□□□ 0.41
BRF1-212ENST00000547562 SLU7O95391 586 aaKnown RBP17.59■□□□□ 0.41
BRF1-212ENST00000547562 TXLNAP40222 546 aa17.59■□□□□ 0.41
BRF1-212ENST00000547562 ADKP55263 362 aaKnown RBP17.59■□□□□ 0.41
BRF1-212ENST00000547562 FAM177A1Q8N128 213 aaPredicted RBP17.59■□□□□ 0.41
BRF1-212ENST00000547562 EYA3Q99504 573 aa17.59■□□□□ 0.41
BRF1-212ENST00000547562 PODXL2Q9NZ53 605 aa17.59■□□□□ 0.41
BRF1-212ENST00000547562 MTMR7Q9Y216 660 aa17.59■□□□□ 0.41
BRF1-212ENST00000547562 FLT1P17948 1338 aa17.59■□□□□ 0.41
BRF1-212ENST00000547562 MFSD14BQ5SR56 506 aa17.59■□□□□ 0.41
BRF1-212ENST00000547562 SEPT12Q8IYM1 358 aa17.59■□□□□ 0.41
BRF1-212ENST00000547562 FAM163AQ96GL9 167 aaPredicted RBP17.59■□□□□ 0.41
BRF1-212ENST00000547562 RHBDL3P58872 404 aa17.58■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms