RNA–Protein interactions for RNA: ENST00000546997.1

BRF1-208, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-208ENST00000546997 GGA3Q9NZ52 723 aa18.93■□□□□ 0.62
BRF1-208ENST00000546997 BAZ2BQ9UIF8 2168 aaKnown RBP18.93■□□□□ 0.62
BRF1-208ENST00000546997 SCN4AP35499 1836 aa18.93■□□□□ 0.62
BRF1-208ENST00000546997 CDC27P30260 824 aa18.93■□□□□ 0.62
BRF1-208ENST00000546997 TNNI2P48788 182 aa18.93■□□□□ 0.62
BRF1-208ENST00000546997 RBM43Q6ZSC3 357 aaKnown RBP18.93■□□□□ 0.62
BRF1-208ENST00000546997 L3MBTL3Q96JM7 780 aaPredicted RBP18.93■□□□□ 0.62
BRF1-208ENST00000546997 STX8Q9UNK0 236 aa18.93■□□□□ 0.62
BRF1-208ENST00000546997 NID2Q14112 1375 aa18.92■□□□□ 0.62
BRF1-208ENST00000546997 RRP1BQ14684 758 aaKnown RBP18.92■□□□□ 0.62
BRF1-208ENST00000546997 DGKHQ86XP1 1220 aa18.92■□□□□ 0.62
BRF1-208ENST00000546997 DEFB129Q9H1M3 183 aa18.92■□□□□ 0.62
BRF1-208ENST00000546997 ADARB2Q9NS39 739 aaKnown RBP18.92■□□□□ 0.62
BRF1-208ENST00000546997 FAM217BQ9NTX9 383 aaPredicted RBP18.92■□□□□ 0.62
BRF1-208ENST00000546997 HERC5Q9UII4 1024 aaKnown RBP18.92■□□□□ 0.62
BRF1-208ENST00000546997 MYH6P13533 1939 aa18.92■□□□□ 0.62
BRF1-208ENST00000546997 ATAD5Q96QE3 1844 aa18.92■□□□□ 0.62
BRF1-208ENST00000546997 IGKV6D-41A0A0C4DH26 115 aa18.92■□□□□ 0.62
BRF1-208ENST00000546997 CCDC66A2RUB6 948 aa18.92■□□□□ 0.62
BRF1-208ENST00000546997 GLTPD2A6NH11 291 aa18.92■□□□□ 0.62
BRF1-208ENST00000546997 GOLGA8AA7E2F4 631 aa18.92■□□□□ 0.62
BRF1-208ENST00000546997 MPHOSPH10O00566 681 aaKnown RBP18.92■□□□□ 0.62
BRF1-208ENST00000546997 FDPSP14324 419 aaKnown RBP18.92■□□□□ 0.62
BRF1-208ENST00000546997 ADD1P35611 737 aaKnown RBP18.92■□□□□ 0.62
BRF1-208ENST00000546997 TROAPQ12815 778 aa18.92■□□□□ 0.62
BRF1-208ENST00000546997 MIGA2Q7L4E1 593 aa18.92■□□□□ 0.62
BRF1-208ENST00000546997 PLA2G4DQ86XP0 818 aa18.92■□□□□ 0.62
BRF1-208ENST00000546997 CCDC112Q8NEF3 446 aa18.92■□□□□ 0.62
BRF1-208ENST00000546997 NUP133Q8WUM0 1156 aa18.92■□□□□ 0.62
BRF1-208ENST00000546997 ANKS1AQ92625 1134 aa18.92■□□□□ 0.62
BRF1-208ENST00000546997 SCAND2PQ9GZW5 306 aaPredicted RBP18.92■□□□□ 0.62
BRF1-208ENST00000546997 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.92■□□□□ 0.62
BRF1-208ENST00000546997 DHX16O60231 1041 aaKnown RBP18.91■□□□□ 0.62
BRF1-208ENST00000546997 GDF11O95390 407 aa18.91■□□□□ 0.62
BRF1-208ENST00000546997 JAG1P78504 1218 aa18.91■□□□□ 0.62
BRF1-208ENST00000546997 CERKLQ49MI3 558 aaPredicted RBP18.91■□□□□ 0.62
BRF1-208ENST00000546997 ZNF771Q7L3S4 317 aaPredicted RBP18.91■□□□□ 0.62
BRF1-208ENST00000546997 NUP62CLQ9H1M0 184 aa18.91■□□□□ 0.62
BRF1-208ENST00000546997 TFIP11Q9UBB9 837 aaKnown RBP18.91■□□□□ 0.62
BRF1-208ENST00000546997 PTGS1P23219 599 aa18.9■□□□□ 0.62
BRF1-208ENST00000546997 SYNE3Q6ZMZ3 975 aa18.9■□□□□ 0.62
BRF1-208ENST00000546997 CATIPQ7Z7H3 387 aa18.9■□□□□ 0.62
BRF1-208ENST00000546997 TMEM47Q9BQJ4 181 aa18.9■□□□□ 0.62
BRF1-208ENST00000546997 DDX19AQ9NUU7 478 aaKnown RBP18.9■□□□□ 0.62
BRF1-208ENST00000546997 FAM53CQ9NYF3 392 aa18.9■□□□□ 0.62
BRF1-208ENST00000546997 MRVI1Q9Y6F6 885 aa18.9■□□□□ 0.62
BRF1-208ENST00000546997 TNNT1P13805 278 aa18.9■□□□□ 0.62
BRF1-208ENST00000546997 NOVP48745 357 aa18.9■□□□□ 0.62
BRF1-208ENST00000546997 TYRO3Q06418 890 aa18.9■□□□□ 0.62
BRF1-208ENST00000546997 APOBEC3FQ8IUX4 373 aaKnown RBP18.9■□□□□ 0.62
BRF1-208ENST00000546997 CCDC17Q96LX7 622 aa18.9■□□□□ 0.62
BRF1-208ENST00000546997 MTMR4Q9NYA4 1195 aa18.9■□□□□ 0.62
BRF1-208ENST00000546997 WDR90Q96KV7 1748 aa18.89■□□□□ 0.61
BRF1-208ENST00000546997 SLFN14P0C7P3 912 aa18.89■□□□□ 0.61
BRF1-208ENST00000546997 RCAN1P53805 252 aa18.89■□□□□ 0.61
BRF1-208ENST00000546997 RTN1Q16799 776 aa18.89■□□□□ 0.61
BRF1-208ENST00000546997 CCDC178Q5BJE1 867 aa18.89■□□□□ 0.61
BRF1-208ENST00000546997 PRAMEF18Q5VWM3 479 aa18.89■□□□□ 0.61
BRF1-208ENST00000546997 RASGRP2Q7LDG7 609 aa18.89■□□□□ 0.61
BRF1-208ENST00000546997 FANCBQ8NB91 859 aa18.89■□□□□ 0.61
BRF1-208ENST00000546997 SPC24Q8NBT2 197 aa18.89■□□□□ 0.61
BRF1-208ENST00000546997 PNMA1Q8ND90 353 aa18.89■□□□□ 0.61
BRF1-208ENST00000546997 KAT14Q9H8E8 782 aa18.89■□□□□ 0.61
BRF1-208ENST00000546997 KCND1Q9NSA2 647 aa18.89■□□□□ 0.61
BRF1-208ENST00000546997 A0A0U1RQG5 324 aaPredicted RBP18.88■□□□□ 0.61
BRF1-208ENST00000546997 CPLX1O14810 134 aa18.88■□□□□ 0.61
BRF1-208ENST00000546997 TBC1D12O60347 775 aa18.88■□□□□ 0.61
BRF1-208ENST00000546997 DDAH1O94760 285 aa18.88■□□□□ 0.61
BRF1-208ENST00000546997 ZNF75DP51815 510 aa18.88■□□□□ 0.61
BRF1-208ENST00000546997 NTRK3Q16288 839 aa18.88■□□□□ 0.61
BRF1-208ENST00000546997 CCDC186Q7Z3E2 898 aa18.88■□□□□ 0.61
BRF1-208ENST00000546997 ZNF397Q8NF99 534 aaPredicted RBP18.88■□□□□ 0.61
BRF1-208ENST00000546997 KIF18AQ8NI77 898 aa18.88■□□□□ 0.61
BRF1-208ENST00000546997 LEO1Q8WVC0 666 aaPredicted RBP18.88■□□□□ 0.61
BRF1-208ENST00000546997 SPATA32Q96LK8 384 aa18.88■□□□□ 0.61
BRF1-208ENST00000546997 MYH15Q9Y2K3 1946 aa18.88■□□□□ 0.61
BRF1-208ENST00000546997 GUCY1A2P33402 732 aa18.88■□□□□ 0.61
BRF1-208ENST00000546997 ABCB5Q2M3G0 1257 aa18.88■□□□□ 0.61
BRF1-208ENST00000546997 NBPF12Q5TAG4 269 aaPredicted RBP18.88■□□□□ 0.61
BRF1-208ENST00000546997 KRT222Q8N1A0 295 aa18.88■□□□□ 0.61
BRF1-208ENST00000546997 CMTR1Q8N1G2 835 aaKnown RBP18.88■□□□□ 0.61
BRF1-208ENST00000546997 POTECB2RU33 542 aa18.87■□□□□ 0.61
BRF1-208ENST00000546997 GH2P01242 217 aa18.87■□□□□ 0.61
BRF1-208ENST00000546997 EPHX2P34913 555 aa18.87■□□□□ 0.61
BRF1-208ENST00000546997 FOSBP53539 338 aa18.87■□□□□ 0.61
BRF1-208ENST00000546997 MAP3K10Q02779 954 aa18.87■□□□□ 0.61
BRF1-208ENST00000546997 SEPT2Q15019 361 aa18.87■□□□□ 0.61
BRF1-208ENST00000546997 PHKBQ93100 1093 aa18.87■□□□□ 0.61
BRF1-208ENST00000546997 DCAF8L1A6NGE4 600 aa18.86■□□□□ 0.61
BRF1-208ENST00000546997 DLK2Q6UY11 383 aa18.86■□□□□ 0.61
BRF1-208ENST00000546997 LRRC47Q8N1G4 583 aaKnown RBP18.86■□□□□ 0.61
BRF1-208ENST00000546997 CFAP45Q9UL16 551 aa18.86■□□□□ 0.61
BRF1-208ENST00000546997 MTMR7Q9Y216 660 aa18.86■□□□□ 0.61
BRF1-208ENST00000546997 PITPNM2Q9BZ72 1349 aa18.86■□□□□ 0.61
BRF1-208ENST00000546997 KIF2AO00139 706 aaPredicted RBP18.86■□□□□ 0.61
BRF1-208ENST00000546997 TTLL1O95922 423 aa18.86■□□□□ 0.61
BRF1-208ENST00000546997 TOP1P11387 765 aaKnown RBP18.86■□□□□ 0.61
BRF1-208ENST00000546997 TERF2Q15554 542 aa18.86■□□□□ 0.61
BRF1-208ENST00000546997 SARM1Q6SZW1 724 aa18.86■□□□□ 0.61
BRF1-208ENST00000546997 TMEM179Q6ZVK1 233 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms