RNA–Protein interactions for RNA: ENST00000546898.1

DDX54-204, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-204ENST00000546898 NT5C2P49902 561 aa18.82■□□□□ 0.6
DDX54-204ENST00000546898 MTFR1Q15390 333 aa18.82■□□□□ 0.6
DDX54-204ENST00000546898 TRMT44Q8IYL2 757 aaKnown RBP18.82■□□□□ 0.6
DDX54-204ENST00000546898 SHCBP1Q8NEM2 672 aa18.82■□□□□ 0.6
DDX54-204ENST00000546898 ATG4CQ96DT6 458 aa18.82■□□□□ 0.6
DDX54-204ENST00000546898 SPATC1LQ9H0A9 340 aa18.82■□□□□ 0.6
DDX54-204ENST00000546898 RNF41Q9H4P4 317 aaPredicted RBP18.82■□□□□ 0.6
DDX54-204ENST00000546898 PPP1R9AQ9ULJ8 1098 aa18.82■□□□□ 0.6
DDX54-204ENST00000546898 ADAMTS5Q9UNA0 930 aa18.82■□□□□ 0.6
DDX54-204ENST00000546898 ZNFX1Q9P2E3 1918 aaKnown RBP18.81■□□□□ 0.6
DDX54-204ENST00000546898 CCL5P13501 91 aa18.81■□□□□ 0.6
DDX54-204ENST00000546898 RGS2P41220 211 aa18.81■□□□□ 0.6
DDX54-204ENST00000546898 MORN1Q5T089 497 aa18.81■□□□□ 0.6
DDX54-204ENST00000546898 AKNAD1Q5T1N1 836 aa18.81■□□□□ 0.6
DDX54-204ENST00000546898 LRRC47Q8N1G4 583 aaKnown RBP18.81■□□□□ 0.6
DDX54-204ENST00000546898 STAG1Q8WVM7 1258 aa18.81■□□□□ 0.6
DDX54-204ENST00000546898 RUFY2Q8WXA3 655 aa18.81■□□□□ 0.6
DDX54-204ENST00000546898 USP6NLQ92738 828 aa18.81■□□□□ 0.6
DDX54-204ENST00000546898 MOV10L1Q9BXT6 1211 aaKnown RBP18.81■□□□□ 0.6
DDX54-204ENST00000546898 TOMM22Q9NS69 142 aa18.81■□□□□ 0.6
DDX54-204ENST00000546898 TACC3Q9Y6A5 838 aa18.81■□□□□ 0.6
DDX54-204ENST00000546898 IVNS1ABPQ9Y6Y0 642 aa18.81■□□□□ 0.6
DDX54-204ENST00000546898 SLC15A5A6NIM6 579 aa18.8■□□□□ 0.6
DDX54-204ENST00000546898 MYCP01106 439 aaPredicted RBP18.8■□□□□ 0.6
DDX54-204ENST00000546898 HAND2P61296 217 aa18.8■□□□□ 0.6
DDX54-204ENST00000546898 WDR78Q5VTH9 848 aa18.8■□□□□ 0.6
DDX54-204ENST00000546898 MFSD6Q6ZSS7 791 aa18.8■□□□□ 0.6
DDX54-204ENST00000546898 NKX2-3Q8TAU0 364 aa18.8■□□□□ 0.6
DDX54-204ENST00000546898 APBA2Q99767 749 aa18.8■□□□□ 0.6
DDX54-204ENST00000546898 SLF1Q9BQI6 1058 aa18.8■□□□□ 0.6
DDX54-204ENST00000546898 INCENPQ9NQS7 918 aa18.8■□□□□ 0.6
DDX54-204ENST00000546898 FBXO28Q9NVF7 368 aa18.8■□□□□ 0.6
DDX54-204ENST00000546898 STX8Q9UNK0 236 aa18.8■□□□□ 0.6
DDX54-204ENST00000546898 ZNF213O14771 459 aa18.79■□□□□ 0.6
DDX54-204ENST00000546898 GJB1P08034 283 aa18.79■□□□□ 0.6
DDX54-204ENST00000546898 CAPN2P17655 700 aa18.79■□□□□ 0.6
DDX54-204ENST00000546898 CYP2B6P20813 491 aa18.79■□□□□ 0.6
DDX54-204ENST00000546898 PTPREP23469 700 aa18.79■□□□□ 0.6
DDX54-204ENST00000546898 NOVP48745 357 aa18.79■□□□□ 0.6
DDX54-204ENST00000546898 MAP2K5Q13163 448 aa18.79■□□□□ 0.6
DDX54-204ENST00000546898 GRB14Q14449 540 aa18.79■□□□□ 0.6
DDX54-204ENST00000546898 NUP88Q99567 741 aaPredicted RBP18.79■□□□□ 0.6
DDX54-204ENST00000546898 NBPF3Q9H094 633 aa18.79■□□□□ 0.6
DDX54-204ENST00000546898 RNF208Q9H0X6 261 aa18.79■□□□□ 0.6
DDX54-204ENST00000546898 MROH8Q9H579 483 aa18.79■□□□□ 0.6
DDX54-204ENST00000546898 IL17RBQ9NRM6 502 aa18.79■□□□□ 0.6
DDX54-204ENST00000546898 TCP11L1Q9NUJ3 509 aa18.79■□□□□ 0.6
DDX54-204ENST00000546898 CTNNA3Q9UI47 895 aa18.79■□□□□ 0.6
DDX54-204ENST00000546898 PLXNA1Q9UIW2 1896 aa18.78■□□□□ 0.6
DDX54-204ENST00000546898 BRCA2P51587 3418 aa18.78■□□□□ 0.6
DDX54-204ENST00000546898 VWA5AO00534 786 aa18.78■□□□□ 0.6
DDX54-204ENST00000546898 STRNO43815 780 aa18.78■□□□□ 0.6
DDX54-204ENST00000546898 SLC25A27O95847 323 aa18.78■□□□□ 0.6
DDX54-204ENST00000546898 EN2P19622 333 aaPredicted RBP18.78■□□□□ 0.6
DDX54-204ENST00000546898 CHMLP26374 656 aa18.78■□□□□ 0.6
DDX54-204ENST00000546898 COPB2P35606 906 aa18.78■□□□□ 0.6
DDX54-204ENST00000546898 PLS1Q14651 629 aa18.78■□□□□ 0.6
DDX54-204ENST00000546898 RRP12Q5JTH9 1297 aaKnown RBP18.78■□□□□ 0.6
DDX54-204ENST00000546898 SLFN13Q68D06 897 aa18.78■□□□□ 0.6
DDX54-204ENST00000546898 SAMD1Q6SPF0 538 aaPredicted RBP18.78■□□□□ 0.6
DDX54-204ENST00000546898 TBC1D10CQ8IV04 446 aa18.78■□□□□ 0.6
DDX54-204ENST00000546898 PRPF38AQ8NAV1 312 aaKnown RBP18.78■□□□□ 0.6
DDX54-204ENST00000546898 TRIB2Q92519 343 aa18.78■□□□□ 0.6
DDX54-204ENST00000546898 GMCL1Q96IK5 515 aa18.78■□□□□ 0.6
DDX54-204ENST00000546898 UNC93B1Q9H1C4 597 aa18.78■□□□□ 0.6
DDX54-204ENST00000546898 FEM1BQ9UK73 627 aa18.78■□□□□ 0.6
DDX54-204ENST00000546898 SLC34A2O95436 690 aa18.77■□□□□ 0.6
DDX54-204ENST00000546898 HOXC6P09630 235 aa18.77■□□□□ 0.6
DDX54-204ENST00000546898 BMP3P12645 472 aa18.77■□□□□ 0.6
DDX54-204ENST00000546898 ZKSCAN1P17029 563 aaPredicted RBP18.77■□□□□ 0.6
DDX54-204ENST00000546898 ERCC3P19447 782 aa18.77■□□□□ 0.6
DDX54-204ENST00000546898 GJA8P48165 433 aa18.77■□□□□ 0.6
DDX54-204ENST00000546898 TMEM132BQ14DG7 1078 aa18.77■□□□□ 0.6
DDX54-204ENST00000546898 IMMTQ16891 758 aaKnown RBP18.77■□□□□ 0.6
DDX54-204ENST00000546898 REPS2Q8NFH8 660 aa18.77■□□□□ 0.6
DDX54-204ENST00000546898 ESR2Q92731 530 aa18.77■□□□□ 0.6
DDX54-204ENST00000546898 IL25Q9H293 177 aa18.77■□□□□ 0.6
DDX54-204ENST00000546898 TNRC18O15417 2968 aaPredicted RBP18.77■□□□□ 0.59
DDX54-204ENST00000546898 NMT2O60551 498 aa18.76■□□□□ 0.59
DDX54-204ENST00000546898 NCAPG2Q86XI2 1143 aa18.76■□□□□ 0.59
DDX54-204ENST00000546898 RIOX2Q8IUF8 465 aa18.76■□□□□ 0.59
DDX54-204ENST00000546898 ABRAQ8N0Z2 381 aa18.76■□□□□ 0.59
DDX54-204ENST00000546898 PAK6Q9NQU5 681 aaPredicted RBP18.76■□□□□ 0.59
DDX54-204ENST00000546898 ZNF214Q9UL59 606 aaPredicted RBP18.76■□□□□ 0.59
DDX54-204ENST00000546898 FRMPD3Q5JV73 1810 aa18.76■□□□□ 0.59
DDX54-204ENST00000546898 NEDD4P46934 1319 aa18.75■□□□□ 0.59
DDX54-204ENST00000546898 RPTORQ8N122 1335 aa18.75■□□□□ 0.59
DDX54-204ENST00000546898 FDX1P10109 184 aa18.75■□□□□ 0.59
DDX54-204ENST00000546898 STAT3P40763 770 aa18.75■□□□□ 0.59
DDX54-204ENST00000546898 SLC1A4P43007 532 aa18.75■□□□□ 0.59
DDX54-204ENST00000546898 STAT2P52630 851 aa18.75■□□□□ 0.59
DDX54-204ENST00000546898 MAP3K21Q5TCX8 1036 aa18.75■□□□□ 0.59
DDX54-204ENST00000546898 FAM160B2Q86V87 743 aa18.75■□□□□ 0.59
DDX54-204ENST00000546898 U2AF1L4Q8WU68 220 aaKnown RBP18.75■□□□□ 0.59
DDX54-204ENST00000546898 SHISA4Q96DD7 197 aa18.75■□□□□ 0.59
DDX54-204ENST00000546898 TEX13BQ9BXU2 312 aa18.75■□□□□ 0.59
DDX54-204ENST00000546898 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.75■□□□□ 0.59
DDX54-204ENST00000546898 ATP2A1O14983 1001 aa18.74■□□□□ 0.59
DDX54-204ENST00000546898 SGSM2O43147 1006 aa18.74■□□□□ 0.59
DDX54-204ENST00000546898 PLA2G6O60733 806 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms