RNA–Protein interactions for RNA: ENST00000546378.1

HOXC11-202, Transcript of homeobox C11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC11, Length 3,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-202ENST00000546378 EZH2Q15910 746 aaKnown RBP16.51■□□□□ 0.23
HOXC11-202ENST00000546378 CCDC148Q8NFR7 591 aa16.51■□□□□ 0.23
HOXC11-202ENST00000546378 NELFBQ8WX92 580 aa16.51■□□□□ 0.23
HOXC11-202ENST00000546378 FAM207AQ9NSI2 230 aaPredicted RBP16.51■□□□□ 0.23
HOXC11-202ENST00000546378 ATP1A1P05023 1023 aaKnown RBP16.51■□□□□ 0.23
HOXC11-202ENST00000546378 GOLGA8HP0CJ92 632 aa16.51■□□□□ 0.23
HOXC11-202ENST00000546378 ADD2P35612 726 aa16.51■□□□□ 0.23
HOXC11-202ENST00000546378 CTSWP56202 376 aa16.51■□□□□ 0.23
HOXC11-202ENST00000546378 RASGRF1Q13972 1273 aa16.51■□□□□ 0.23
HOXC11-202ENST00000546378 KRT31Q15323 416 aa16.51■□□□□ 0.23
HOXC11-202ENST00000546378 BCCIPQ9P287 314 aaKnown RBP eCLIP16.51■□□□□ 0.23
HOXC11-202ENST00000546378 TUBE1Q9UJT0 475 aa16.51■□□□□ 0.23
HOXC11-202ENST00000546378 TACC3Q9Y6A5 838 aa16.51■□□□□ 0.23
HOXC11-202ENST00000546378 UTRNP46939 3433 aa16.51■□□□□ 0.23
HOXC11-202ENST00000546378 PLEKHG2Q9H7P9 1386 aa16.51■□□□□ 0.23
HOXC11-202ENST00000546378 ADAMTS3O15072 1205 aa16.51■□□□□ 0.23
HOXC11-202ENST00000546378 GYPCP04921 128 aa16.51■□□□□ 0.23
HOXC11-202ENST00000546378 IDEP14735 1019 aa16.51■□□□□ 0.23
HOXC11-202ENST00000546378 ACTN2P35609 894 aa16.51■□□□□ 0.23
HOXC11-202ENST00000546378 IFIT1BQ5T764 474 aaKnown RBP16.51■□□□□ 0.23
HOXC11-202ENST00000546378 SND1Q7KZF4 910 aaKnown RBP eCLIP16.51■□□□□ 0.23
HOXC11-202ENST00000546378 KIFC2Q96AC6 838 aa16.51■□□□□ 0.23
HOXC11-202ENST00000546378 MMS19Q96T76 1030 aa16.51■□□□□ 0.23
HOXC11-202ENST00000546378 NACAP1Q9BZK3 213 aa16.51■□□□□ 0.23
HOXC11-202ENST00000546378 TSPYL1Q9H0U9 437 aa16.51■□□□□ 0.23
HOXC11-202ENST00000546378 RTCBQ9Y3I0 505 aaKnown RBP16.51■□□□□ 0.23
HOXC11-202ENST00000546378 TNKSO95271 1327 aa16.51■□□□□ 0.23
HOXC11-202ENST00000546378 B4DLN1 442 aa16.5■□□□□ 0.23
HOXC11-202ENST00000546378 MMP1P03956 469 aa16.5■□□□□ 0.23
HOXC11-202ENST00000546378 ERVK-24P63145 666 aa16.5■□□□□ 0.23
HOXC11-202ENST00000546378 FAM196AQ6ZSG2 479 aa16.5■□□□□ 0.23
HOXC11-202ENST00000546378 FAM217BQ9NTX9 383 aaPredicted RBP16.5■□□□□ 0.23
HOXC11-202ENST00000546378 BUB1O43683 1085 aa16.5■□□□□ 0.23
HOXC11-202ENST00000546378 MAP9Q49MG5 647 aa16.5■□□□□ 0.23
HOXC11-202ENST00000546378 MLKLQ8NB16 471 aa16.5■□□□□ 0.23
HOXC11-202ENST00000546378 FANCBQ8NB91 859 aa16.5■□□□□ 0.23
HOXC11-202ENST00000546378 IGDCC4Q8TDY8 1250 aa16.5■□□□□ 0.23
HOXC11-202ENST00000546378 PAGE5Q96GU1 130 aa16.5■□□□□ 0.23
HOXC11-202ENST00000546378 CAMTA2O94983 1202 aa16.5■□□□□ 0.23
HOXC11-202ENST00000546378 ZFYP08048 801 aaPredicted RBP16.5■□□□□ 0.23
HOXC11-202ENST00000546378 RFC4P35249 363 aa16.5■□□□□ 0.23
HOXC11-202ENST00000546378 MTIF2P46199 727 aaKnown RBP16.5■□□□□ 0.23
HOXC11-202ENST00000546378 RASGRP2Q7LDG7 609 aa16.5■□□□□ 0.23
HOXC11-202ENST00000546378 TMC4Q7Z404 712 aa16.5■□□□□ 0.23
HOXC11-202ENST00000546378 NOC3LQ8WTT2 800 aaKnown RBP16.5■□□□□ 0.23
HOXC11-202ENST00000546378 FBXO2Q9UK22 296 aaPredicted RBP16.5■□□□□ 0.23
HOXC11-202ENST00000546378 MYO6Q9UM54 1294 aa16.5■□□□□ 0.23
HOXC11-202ENST00000546378 ZNF652Q9Y2D9 606 aa16.5■□□□□ 0.23
HOXC11-202ENST00000546378 SIPA1L3O60292 1781 aaPredicted RBP16.49■□□□□ 0.23
HOXC11-202ENST00000546378 PDE8AO60658 829 aa16.49■□□□□ 0.23
HOXC11-202ENST00000546378 AKNAD1Q5T1N1 836 aa16.49■□□□□ 0.23
HOXC11-202ENST00000546378 TRMT1LQ7Z2T5 733 aaKnown RBP16.49■□□□□ 0.23
HOXC11-202ENST00000546378 SPATA5Q8NB90 893 aa16.49■□□□□ 0.23
HOXC11-202ENST00000546378 RUFY1Q96T51 708 aa16.49■□□□□ 0.23
HOXC11-202ENST00000546378 NCK2O43639 380 aa16.49■□□□□ 0.23
HOXC11-202ENST00000546378 PLCD1P51178 756 aa16.49■□□□□ 0.23
HOXC11-202ENST00000546378 GUCY2FP51841 1108 aa16.49■□□□□ 0.23
HOXC11-202ENST00000546378 TRIM28Q13263 835 aaKnown RBP16.49■□□□□ 0.23
HOXC11-202ENST00000546378 RNF187Q5TA31 235 aaPredicted RBP16.49■□□□□ 0.23
HOXC11-202ENST00000546378 PAXIP1Q6ZW49 1069 aaPredicted RBP16.49■□□□□ 0.23
HOXC11-202ENST00000546378 MMRN2Q9H8L6 949 aa16.49■□□□□ 0.23
HOXC11-202ENST00000546378 STX8Q9UNK0 236 aa16.49■□□□□ 0.23
HOXC11-202ENST00000546378 STAT6P42226 847 aa16.48■□□□□ 0.23
HOXC11-202ENST00000546378 CCDC181Q5TID7 509 aa16.48■□□□□ 0.23
HOXC11-202ENST00000546378 TYW1BQ6NUM6 668 aa16.48■□□□□ 0.23
HOXC11-202ENST00000546378 AMIGO3Q86WK7 504 aa16.48■□□□□ 0.23
HOXC11-202ENST00000546378 SH2D3CQ8N5H7 860 aa16.48■□□□□ 0.23
HOXC11-202ENST00000546378 TBC1D7Q9P0N9 293 aa16.48■□□□□ 0.23
HOXC11-202ENST00000546378 ERVV-1B6SEH8 477 aa16.48■□□□□ 0.23
HOXC11-202ENST00000546378 KCNJ18B7U540 433 aa16.48■□□□□ 0.23
HOXC11-202ENST00000546378 HGSO14964 777 aaPredicted RBP16.48■□□□□ 0.23
HOXC11-202ENST00000546378 MFAP3LO75121 409 aa16.48■□□□□ 0.23
HOXC11-202ENST00000546378 PLEKP08567 350 aaPredicted RBP16.48■□□□□ 0.23
HOXC11-202ENST00000546378 HPDP32754 393 aaPredicted RBP16.48■□□□□ 0.23
HOXC11-202ENST00000546378 KCNJ12Q14500 433 aa16.48■□□□□ 0.23
HOXC11-202ENST00000546378 TDRD12Q587J7 1177 aaKnown RBP16.48■□□□□ 0.23
HOXC11-202ENST00000546378 NBPF5PQ86XG9 351 aaPredicted RBP16.48■□□□□ 0.23
HOXC11-202ENST00000546378 CEP112Q8N8E3 955 aa16.48■□□□□ 0.23
HOXC11-202ENST00000546378 STRBPQ96SI9 672 aaKnown RBP16.48■□□□□ 0.23
HOXC11-202ENST00000546378 AGPAT5Q9NUQ2 364 aa16.48■□□□□ 0.23
HOXC11-202ENST00000546378 TFCP2L1Q9NZI6 479 aa16.48■□□□□ 0.23
HOXC11-202ENST00000546378 MAGEC2Q9UBF1 373 aaPredicted RBP16.48■□□□□ 0.23
HOXC11-202ENST00000546378 PCNTO95613 3336 aa16.48■□□□□ 0.23
HOXC11-202ENST00000546378 XBP1P17861 261 aa16.48■□□□□ 0.23
HOXC11-202ENST00000546378 GGCXP38435 758 aa16.48■□□□□ 0.23
HOXC11-202ENST00000546378 MNAT1P51948 309 aa16.48■□□□□ 0.23
HOXC11-202ENST00000546378 MORC3Q14149 939 aa16.48■□□□□ 0.23
HOXC11-202ENST00000546378 ERFEQ4G0M1 354 aa16.48■□□□□ 0.23
HOXC11-202ENST00000546378 DYMQ7RTS9 669 aa16.48■□□□□ 0.23
HOXC11-202ENST00000546378 KRT27Q7Z3Y8 459 aa16.48■□□□□ 0.23
HOXC11-202ENST00000546378 SETDB2Q96T68 719 aa16.48■□□□□ 0.23
HOXC11-202ENST00000546378 HPSEQ9Y251 543 aa16.48■□□□□ 0.23
HOXC11-202ENST00000546378 PPP6R2O75170 966 aa16.47■□□□□ 0.23
HOXC11-202ENST00000546378 TTC31Q49AM3 519 aaPredicted RBP16.47■□□□□ 0.23
HOXC11-202ENST00000546378 RILPL1Q5EBL4 403 aa16.47■□□□□ 0.23
HOXC11-202ENST00000546378 BEND6Q5SZJ8 279 aaPredicted RBP16.47■□□□□ 0.23
HOXC11-202ENST00000546378 TBC1D9BQ66K14 1250 aa16.47■□□□□ 0.23
HOXC11-202ENST00000546378 ZNF34Q8IZ26 560 aa16.47■□□□□ 0.23
HOXC11-202ENST00000546378 LUC7L2Q9Y383 392 aaKnown RBP16.47■□□□□ 0.23
HOXC11-202ENST00000546378 TTC26A0AVF1 554 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms