RNA–Protein interactions for RNA: ENST00000546215.5

SCARB1-211, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARB1, Length 1,597 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-211ENST00000546215 WTAPQ15007 396 aa24.38■■□□□ 1.49
SCARB1-211ENST00000546215 NOM1Q5C9Z4 860 aaKnown RBP24.38■■□□□ 1.49
SCARB1-211ENST00000546215 RASGRP2Q7LDG7 609 aa24.38■■□□□ 1.49
SCARB1-211ENST00000546215 TMEM87BQ96K49 555 aa24.38■■□□□ 1.49
SCARB1-211ENST00000546215 GPHNQ9NQX3 736 aaPredicted RBP24.38■■□□□ 1.49
SCARB1-211ENST00000546215 GPR25O00155 361 aa24.37■■□□□ 1.49
SCARB1-211ENST00000546215 BMP3P12645 472 aa24.37■■□□□ 1.49
SCARB1-211ENST00000546215 POTEEQ6S8J3 1075 aa24.37■■□□□ 1.49
SCARB1-211ENST00000546215 DCAF4Q8WV16 495 aa24.37■■□□□ 1.49
SCARB1-211ENST00000546215 CHMP4CQ96CF2 233 aa24.37■■□□□ 1.49
SCARB1-211ENST00000546215 LRRC2Q9BYS8 371 aa24.37■■□□□ 1.49
SCARB1-211ENST00000546215 LY9Q9HBG7 655 aa24.37■■□□□ 1.49
SCARB1-211ENST00000546215 FBXO28Q9NVF7 368 aa24.37■■□□□ 1.49
SCARB1-211ENST00000546215 CPA4Q9UI42 421 aa24.37■■□□□ 1.49
SCARB1-211ENST00000546215 MTMR7Q9Y216 660 aa24.37■■□□□ 1.49
SCARB1-211ENST00000546215 WDR19Q8NEZ3 1342 aa24.37■■□□□ 1.49
SCARB1-211ENST00000546215 SH2B2O14492 632 aaPredicted RBP24.37■■□□□ 1.49
SCARB1-211ENST00000546215 FLOT1O75955 427 aa24.37■■□□□ 1.49
SCARB1-211ENST00000546215 SNHG28P0DPA3 235 aa24.37■■□□□ 1.49
SCARB1-211ENST00000546215 PDHBP11177 359 aa24.37■■□□□ 1.49
SCARB1-211ENST00000546215 BCRP11274 1271 aa24.37■■□□□ 1.49
SCARB1-211ENST00000546215 CPA1P15085 419 aa24.37■■□□□ 1.49
SCARB1-211ENST00000546215 PSMA5P28066 241 aa24.37■■□□□ 1.49
SCARB1-211ENST00000546215 HOXC10Q9NYD6 342 aa24.37■■□□□ 1.49
SCARB1-211ENST00000546215 PARP14Q460N5 1801 aa24.36■■□□□ 1.49
SCARB1-211ENST00000546215 SPDYE16A6NNV3 312 aaPredicted RBP24.36■■□□□ 1.49
SCARB1-211ENST00000546215 DSG3P32926 999 aa24.36■■□□□ 1.49
SCARB1-211ENST00000546215 GCLCP48506 637 aaPredicted RBP24.36■■□□□ 1.49
SCARB1-211ENST00000546215 ANAPC15P60006 121 aa24.36■■□□□ 1.49
SCARB1-211ENST00000546215 BLOC1S2Q6QNY1 142 aa24.36■■□□□ 1.49
SCARB1-211ENST00000546215 LBX2Q6XYB7 198 aa24.36■■□□□ 1.49
SCARB1-211ENST00000546215 TCEANC2Q96MN5 208 aa24.36■■□□□ 1.49
SCARB1-211ENST00000546215 MYPNQ86TC9 1320 aa24.35■■□□□ 1.49
SCARB1-211ENST00000546215 CASTP20810 708 aaKnown RBP24.35■■□□□ 1.49
SCARB1-211ENST00000546215 LIFRP42702 1097 aa24.35■■□□□ 1.49
SCARB1-211ENST00000546215 LBX1P52954 281 aa24.35■■□□□ 1.49
SCARB1-211ENST00000546215 KCTD1Q719H9 257 aa24.35■■□□□ 1.49
SCARB1-211ENST00000546215 IL17RAQ96F46 866 aa24.35■■□□□ 1.49
SCARB1-211ENST00000546215 TM6SF1Q9BZW5 370 aa24.35■■□□□ 1.49
SCARB1-211ENST00000546215 ZSWIM6Q9HCJ5 1215 aa24.35■■□□□ 1.49
SCARB1-211ENST00000546215 TMTC2Q8N394 836 aa24.34■■□□□ 1.49
SCARB1-211ENST00000546215 ANKRD13CQ8N6S4 541 aa24.34■■□□□ 1.49
SCARB1-211ENST00000546215 GTF3C2Q8WUA4 911 aaPredicted RBP24.34■■□□□ 1.49
SCARB1-211ENST00000546215 RBPJLQ9UBG7 517 aa24.34■■□□□ 1.49
SCARB1-211ENST00000546215 FEM1BQ9UK73 627 aa24.34■■□□□ 1.49
SCARB1-211ENST00000546215 PPP1R9AQ9ULJ8 1098 aa24.34■■□□□ 1.49
SCARB1-211ENST00000546215 TMEM232C9JQI7 657 aa24.33■■□□□ 1.49
SCARB1-211ENST00000546215 RPS6KB1P23443 525 aa24.33■■□□□ 1.49
SCARB1-211ENST00000546215 ZNF296Q8WUU4 475 aaPredicted RBP24.33■■□□□ 1.49
SCARB1-211ENST00000546215 TXNRD2Q9NNW7 524 aa24.33■■□□□ 1.49
SCARB1-211ENST00000546215 ADAMTS5Q9UNA0 930 aa24.33■■□□□ 1.49
SCARB1-211ENST00000546215 PLA2G6O60733 806 aa24.33■■□□□ 1.48
SCARB1-211ENST00000546215 SP3Q02447 781 aa24.33■■□□□ 1.48
SCARB1-211ENST00000546215 ZNF543Q08ER8 600 aa24.33■■□□□ 1.48
SCARB1-211ENST00000546215 CCDC96Q2M329 555 aa24.33■■□□□ 1.48
SCARB1-211ENST00000546215 RUFY3Q7L099 469 aa24.33■■□□□ 1.48
SCARB1-211ENST00000546215 PRPF38AQ8NAV1 312 aaKnown RBP24.33■■□□□ 1.48
SCARB1-211ENST00000546215 ATG4CQ96DT6 458 aa24.33■■□□□ 1.48
SCARB1-211ENST00000546215 SLF1Q9BQI6 1058 aa24.33■■□□□ 1.48
SCARB1-211ENST00000546215 PEX10O60683 326 aa24.32■■□□□ 1.48
SCARB1-211ENST00000546215 STAT2P52630 851 aa24.32■■□□□ 1.48
SCARB1-211ENST00000546215 TROAPQ12815 778 aa24.32■■□□□ 1.48
SCARB1-211ENST00000546215 FAM110CQ1W6H9 321 aa24.32■■□□□ 1.48
SCARB1-211ENST00000546215 SGMS1Q86VZ5 419 aa24.32■■□□□ 1.48
SCARB1-211ENST00000546215 BACH2Q9BYV9 841 aa24.32■■□□□ 1.48
SCARB1-211ENST00000546215 MORF4L1Q9UBU8 362 aa24.32■■□□□ 1.48
SCARB1-211ENST00000546215 ISY1Q9ULR0 285 aaKnown RBP24.32■■□□□ 1.48
SCARB1-211ENST00000546215 RABGAP1Q9Y3P9 1069 aa24.32■■□□□ 1.48
SCARB1-211ENST00000546215 CASP8AP2Q9UKL3 1982 aa24.32■■□□□ 1.48
SCARB1-211ENST00000546215 FRMPD2Q68DX3 1309 aaPredicted RBP24.31■■□□□ 1.48
SCARB1-211ENST00000546215 FKTNO75072 461 aa24.31■■□□□ 1.48
SCARB1-211ENST00000546215 CNMDO75829 334 aa24.31■■□□□ 1.48
SCARB1-211ENST00000546215 TTBK2Q6IQ55 1244 aa24.31■■□□□ 1.48
SCARB1-211ENST00000546215 SAMD1Q6SPF0 538 aaPredicted RBP24.31■■□□□ 1.48
SCARB1-211ENST00000546215 FBXL16Q8N461 479 aa24.31■■□□□ 1.48
SCARB1-211ENST00000546215 CHURC1Q8WUH1 139 aa24.31■■□□□ 1.48
SCARB1-211ENST00000546215 GPCPD1Q9NPB8 672 aa24.31■■□□□ 1.48
SCARB1-211ENST00000546215 BTBD7Q9P203 1132 aa24.31■■□□□ 1.48
SCARB1-211ENST00000546215 GPATCH4Q5T3I0 446 aaKnown RBP24.3■■□□□ 1.48
SCARB1-211ENST00000546215 BTNL9Q6UXG8 535 aa24.3■■□□□ 1.48
SCARB1-211ENST00000546215 CATIPQ7Z7H3 387 aa24.3■■□□□ 1.48
SCARB1-211ENST00000546215 FAM160B2Q86V87 743 aa24.3■■□□□ 1.48
SCARB1-211ENST00000546215 PAGR1Q9BTK6 254 aa24.3■■□□□ 1.48
SCARB1-211ENST00000546215 UPF3BQ9BZI7 483 aaKnown RBP24.3■■□□□ 1.48
SCARB1-211ENST00000546215 CYP46A1Q9Y6A2 500 aa24.3■■□□□ 1.48
SCARB1-211ENST00000546215 CCDC69A6NI79 296 aa24.29■■□□□ 1.48
SCARB1-211ENST00000546215 VWA5AO00534 786 aa24.29■■□□□ 1.48
SCARB1-211ENST00000546215 GOLGA8HP0CJ92 632 aa24.29■■□□□ 1.48
SCARB1-211ENST00000546215 ERVK-9P63128 1117 aa24.29■■□□□ 1.48
SCARB1-211ENST00000546215 ERVK-24P63145 666 aa24.29■■□□□ 1.48
SCARB1-211ENST00000546215 Q3C1V9 767 aa24.29■■□□□ 1.48
SCARB1-211ENST00000546215 NFXL1Q6ZNB6 911 aa24.29■■□□□ 1.48
SCARB1-211ENST00000546215 Q6ZUG5 572 aa24.29■■□□□ 1.48
SCARB1-211ENST00000546215 ZNF654Q8IZM8 581 aa24.29■■□□□ 1.48
SCARB1-211ENST00000546215 MB21D1Q8N884 522 aa24.29■■□□□ 1.48
SCARB1-211ENST00000546215 GPRC5AQ8NFJ5 357 aa24.29■■□□□ 1.48
SCARB1-211ENST00000546215 KIFC2Q96AC6 838 aa24.29■■□□□ 1.48
SCARB1-211ENST00000546215 AGXT2Q9BYV1 514 aa24.29■■□□□ 1.48
SCARB1-211ENST00000546215 C22orf23Q9BZE7 217 aa24.29■■□□□ 1.48
SCARB1-211ENST00000546215 A0A0G2JMZ2 1700 aa24.29■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms