RNA–Protein interactions for RNA: ENST00000545998.1

HMGA2-211, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-211ENST00000545998 PNMA1Q8ND90 353 aa24.03■■□□□ 1.44
HMGA2-211ENST00000545998 KAT14Q9H8E8 782 aa24.03■■□□□ 1.44
HMGA2-211ENST00000545998 ERICH2A1L162 156 aa24.03■■□□□ 1.44
HMGA2-211ENST00000545998 SPDYE16A6NNV3 312 aaPredicted RBP24.03■■□□□ 1.44
HMGA2-211ENST00000545998 FLOT1O75955 427 aa24.03■■□□□ 1.44
HMGA2-211ENST00000545998 BMP3P12645 472 aa24.03■■□□□ 1.44
HMGA2-211ENST00000545998 SLC1A4P43007 532 aa24.03■■□□□ 1.44
HMGA2-211ENST00000545998 TMEM67Q5HYA8 995 aa24.03■■□□□ 1.44
HMGA2-211ENST00000545998 LBX2Q6XYB7 198 aa24.03■■□□□ 1.44
HMGA2-211ENST00000545998 ZNF296Q8WUU4 475 aaPredicted RBP24.03■■□□□ 1.44
HMGA2-211ENST00000545998 DCAF4Q8WV16 495 aa24.03■■□□□ 1.44
HMGA2-211ENST00000545998 A0A0G2JMZ2 1700 aa24.02■■□□□ 1.44
HMGA2-211ENST00000545998 HMGB1P09429 215 aaKnown RBP24.02■■□□□ 1.44
HMGA2-211ENST00000545998 DSG3P32926 999 aa24.02■■□□□ 1.44
HMGA2-211ENST00000545998 EXOSC10Q01780 885 aaKnown RBP24.02■■□□□ 1.44
HMGA2-211ENST00000545998 WTAPQ15007 396 aa24.02■■□□□ 1.44
HMGA2-211ENST00000545998 DHX32Q7L7V1 743 aaKnown RBP24.02■■□□□ 1.44
HMGA2-211ENST00000545998 GTF3C2Q8WUA4 911 aaPredicted RBP24.02■■□□□ 1.44
HMGA2-211ENST00000545998 CHMP4CQ96CF2 233 aa24.02■■□□□ 1.44
HMGA2-211ENST00000545998 JAKMIP1Q96N16 626 aaKnown RBP24.02■■□□□ 1.44
HMGA2-211ENST00000545998 SENP2Q9HC62 589 aa24.02■■□□□ 1.44
HMGA2-211ENST00000545998 FBXO28Q9NVF7 368 aa24.02■■□□□ 1.44
HMGA2-211ENST00000545998 HOXC10Q9NYD6 342 aa24.02■■□□□ 1.44
HMGA2-211ENST00000545998 MTMR7Q9Y216 660 aa24.02■■□□□ 1.44
HMGA2-211ENST00000545998 MYPNQ86TC9 1320 aa24.02■■□□□ 1.44
HMGA2-211ENST00000545998 WDR19Q8NEZ3 1342 aa24.02■■□□□ 1.44
HMGA2-211ENST00000545998 PDHBP11177 359 aa24.01■■□□□ 1.43
HMGA2-211ENST00000545998 TMEM87BQ96K49 555 aa24.01■■□□□ 1.43
HMGA2-211ENST00000545998 LY9Q9HBG7 655 aa24.01■■□□□ 1.43
HMGA2-211ENST00000545998 GPHNQ9NQX3 736 aaPredicted RBP24.01■■□□□ 1.43
HMGA2-211ENST00000545998 SH2B2O14492 632 aaPredicted RBP24■■□□□ 1.43
HMGA2-211ENST00000545998 FKTNO75072 461 aa24■■□□□ 1.43
HMGA2-211ENST00000545998 SNHG28P0DPA3 235 aa24■■□□□ 1.43
HMGA2-211ENST00000545998 SP3Q02447 781 aa24■■□□□ 1.43
HMGA2-211ENST00000545998 ANKRD13CQ8N6S4 541 aa24■■□□□ 1.43
HMGA2-211ENST00000545998 TXNRD2Q9NNW7 524 aa24■■□□□ 1.43
HMGA2-211ENST00000545998 RBPJLQ9UBG7 517 aa24■■□□□ 1.43
HMGA2-211ENST00000545998 FEM1BQ9UK73 627 aa24■■□□□ 1.43
HMGA2-211ENST00000545998 PPP1R9AQ9ULJ8 1098 aa24■■□□□ 1.43
HMGA2-211ENST00000545998 COL11A1P12107 1806 aaPredicted RBP24■■□□□ 1.43
HMGA2-211ENST00000545998 FAM110CQ1W6H9 321 aa23.99■■□□□ 1.43
HMGA2-211ENST00000545998 KCTD1Q719H9 257 aa23.99■■□□□ 1.43
HMGA2-211ENST00000545998 SLF1Q9BQI6 1058 aa23.99■■□□□ 1.43
HMGA2-211ENST00000545998 LRRC2Q9BYS8 371 aa23.99■■□□□ 1.43
HMGA2-211ENST00000545998 MORF4L1Q9UBU8 362 aa23.99■■□□□ 1.43
HMGA2-211ENST00000545998 ADAMTS5Q9UNA0 930 aa23.99■■□□□ 1.43
HMGA2-211ENST00000545998 CPA1P15085 419 aa23.99■■□□□ 1.43
HMGA2-211ENST00000545998 PSMA5P28066 241 aa23.99■■□□□ 1.43
HMGA2-211ENST00000545998 ATG4CQ96DT6 458 aa23.99■■□□□ 1.43
HMGA2-211ENST00000545998 PRDM10Q9NQV6 1147 aa23.99■■□□□ 1.43
HMGA2-211ENST00000545998 MGAMO43451 1857 aa23.98■■□□□ 1.43
HMGA2-211ENST00000545998 HTTP42858 3142 aa23.98■■□□□ 1.43
HMGA2-211ENST00000545998 TMEM232C9JQI7 657 aa23.98■■□□□ 1.43
HMGA2-211ENST00000545998 PEX10O60683 326 aa23.98■■□□□ 1.43
HMGA2-211ENST00000545998 PLA2G6O60733 806 aa23.98■■□□□ 1.43
HMGA2-211ENST00000545998 CNMDO75829 334 aa23.98■■□□□ 1.43
HMGA2-211ENST00000545998 LIFRP42702 1097 aa23.98■■□□□ 1.43
HMGA2-211ENST00000545998 STAT2P52630 851 aa23.98■■□□□ 1.43
HMGA2-211ENST00000545998 ANAPC15P60006 121 aa23.98■■□□□ 1.43
HMGA2-211ENST00000545998 CCDC96Q2M329 555 aa23.98■■□□□ 1.43
HMGA2-211ENST00000545998 BLOC1S2Q6QNY1 142 aa23.98■■□□□ 1.43
HMGA2-211ENST00000545998 TCEANC2Q96MN5 208 aa23.98■■□□□ 1.43
HMGA2-211ENST00000545998 ISY1Q9ULR0 285 aaKnown RBP23.98■■□□□ 1.43
HMGA2-211ENST00000545998 RABGAP1Q9Y3P9 1069 aa23.98■■□□□ 1.43
HMGA2-211ENST00000545998 CASTP20810 708 aaKnown RBP23.97■■□□□ 1.43
HMGA2-211ENST00000545998 ZNF543Q08ER8 600 aa23.97■■□□□ 1.43
HMGA2-211ENST00000545998 SAMD1Q6SPF0 538 aaPredicted RBP23.97■■□□□ 1.43
HMGA2-211ENST00000545998 TMTC2Q8N394 836 aa23.97■■□□□ 1.43
HMGA2-211ENST00000545998 PRPF38AQ8NAV1 312 aaKnown RBP23.97■■□□□ 1.43
HMGA2-211ENST00000545998 IL17RAQ96F46 866 aa23.97■■□□□ 1.43
HMGA2-211ENST00000545998 PAGR1Q9BTK6 254 aa23.97■■□□□ 1.43
HMGA2-211ENST00000545998 TM6SF1Q9BZW5 370 aa23.97■■□□□ 1.43
HMGA2-211ENST00000545998 BTBD7Q9P203 1132 aa23.97■■□□□ 1.43
HMGA2-211ENST00000545998 ZSWIM8A7E2V4 1837 aa23.97■■□□□ 1.43
HMGA2-211ENST00000545998 RPS6KB1P23443 525 aa23.96■■□□□ 1.43
HMGA2-211ENST00000545998 ERVK-9P63128 1117 aa23.96■■□□□ 1.43
HMGA2-211ENST00000545998 ERVK-24P63145 666 aa23.96■■□□□ 1.43
HMGA2-211ENST00000545998 LACTBP83111 547 aaPredicted RBP23.96■■□□□ 1.43
HMGA2-211ENST00000545998 FAM160B2Q86V87 743 aa23.96■■□□□ 1.43
HMGA2-211ENST00000545998 MB21D1Q8N884 522 aa23.96■■□□□ 1.43
HMGA2-211ENST00000545998 GPRC5AQ8NFJ5 357 aa23.96■■□□□ 1.43
HMGA2-211ENST00000545998 CHURC1Q8WUH1 139 aa23.96■■□□□ 1.43
HMGA2-211ENST00000545998 ZSWIM6Q9HCJ5 1215 aa23.96■■□□□ 1.43
HMGA2-211ENST00000545998 FRMPD2Q68DX3 1309 aaPredicted RBP23.96■■□□□ 1.43
HMGA2-211ENST00000545998 CENPFP49454 3210 aa23.96■■□□□ 1.43
HMGA2-211ENST00000545998 VWA5AO00534 786 aa23.95■■□□□ 1.43
HMGA2-211ENST00000545998 CAP1Q01518 475 aa23.95■■□□□ 1.43
HMGA2-211ENST00000545998 TROAPQ12815 778 aa23.95■■□□□ 1.43
HMGA2-211ENST00000545998 Q3C1V9 767 aa23.95■■□□□ 1.43
HMGA2-211ENST00000545998 TTBK2Q6IQ55 1244 aa23.95■■□□□ 1.43
HMGA2-211ENST00000545998 CD99L2Q8TCZ2 262 aa23.95■■□□□ 1.43
HMGA2-211ENST00000545998 KIFC2Q96AC6 838 aa23.95■■□□□ 1.43
HMGA2-211ENST00000545998 ERO1AQ96HE7 468 aa23.95■■□□□ 1.43
HMGA2-211ENST00000545998 GPATCH4Q5T3I0 446 aaKnown RBP23.95■■□□□ 1.42
HMGA2-211ENST00000545998 BTNL9Q6UXG8 535 aa23.95■■□□□ 1.42
HMGA2-211ENST00000545998 RUFY3Q7L099 469 aa23.95■■□□□ 1.42
HMGA2-211ENST00000545998 CATIPQ7Z7H3 387 aa23.95■■□□□ 1.42
HMGA2-211ENST00000545998 SGMS1Q86VZ5 419 aa23.95■■□□□ 1.42
HMGA2-211ENST00000545998 GPCPD1Q9NPB8 672 aa23.95■■□□□ 1.42
HMGA2-211ENST00000545998 DOCK3Q8IZD9 2030 aa23.94■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms