RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-225ENST00000545920 ARHGAP29Q52LW3 1261 aa7.37□□□□□ -1.23
SNHG1-225ENST00000545920 TAF7LQ5H9L4 462 aa7.37□□□□□ -1.23
SNHG1-225ENST00000545920 MUM1L1Q5H9M0 696 aa7.37□□□□□ -1.23
SNHG1-225ENST00000545920 NBPF14Q5TI25 921 aa7.37□□□□□ -1.23
SNHG1-225ENST00000545920 KRT40Q6A162 431 aa7.37□□□□□ -1.23
SNHG1-225ENST00000545920 NBPF10Q6P3W6 841 aaKnown RBP7.37□□□□□ -1.23
SNHG1-225ENST00000545920 TRIM65Q6PJ69 517 aa7.37□□□□□ -1.23
SNHG1-225ENST00000545920 APOA5Q6Q788 366 aa7.37□□□□□ -1.23
SNHG1-225ENST00000545920 SYT10Q6XYQ8 523 aa7.37□□□□□ -1.23
SNHG1-225ENST00000545920 KIF6Q6ZMV9 814 aa7.37□□□□□ -1.23
SNHG1-225ENST00000545920 NOSTRINQ8IVI9 506 aa7.37□□□□□ -1.23
SNHG1-225ENST00000545920 REXO1L1PQ8IX06 675 aa7.37□□□□□ -1.23
SNHG1-225ENST00000545920 FAM177A1Q8N128 213 aaPredicted RBP7.37□□□□□ -1.23
SNHG1-225ENST00000545920 NBPF15Q8N660 670 aa7.37□□□□□ -1.23
SNHG1-225ENST00000545920 CEP112Q8N8E3 955 aa7.37□□□□□ -1.23
SNHG1-225ENST00000545920 CNNM3Q8NE01 707 aa7.37□□□□□ -1.23
SNHG1-225ENST00000545920 SPATA20Q8TB22 786 aa7.37□□□□□ -1.23
SNHG1-225ENST00000545920 ZCRB1Q8TBF4 217 aaKnown RBP7.37□□□□□ -1.23
SNHG1-225ENST00000545920 GOLGA1Q92805 767 aa7.37□□□□□ -1.23
SNHG1-225ENST00000545920 JARID2Q92833 1246 aaPredicted RBP7.37□□□□□ -1.23
SNHG1-225ENST00000545920 MAP3K14Q99558 947 aa7.37□□□□□ -1.23
SNHG1-225ENST00000545920 BAG1Q99933 345 aaPredicted RBP7.37□□□□□ -1.23
SNHG1-225ENST00000545920 UBXN6Q9BZV1 441 aa7.37□□□□□ -1.23
SNHG1-225ENST00000545920 FTOQ9C0B1 505 aaKnown RBP eCLIP7.37□□□□□ -1.23
SNHG1-225ENST00000545920 TRMT1Q9NXH9 659 aaKnown RBP7.37□□□□□ -1.23
SNHG1-225ENST00000545920 MKRN1Q9UHC7 482 aaKnown RBP7.37□□□□□ -1.23
SNHG1-225ENST00000545920 FHOD1Q9Y613 1164 aa7.37□□□□□ -1.23
SNHG1-225ENST00000545920 NUP188Q5SRE5 1749 aa7.37□□□□□ -1.23
SNHG1-225ENST00000545920 ADAMTSL3P82987 1691 aa7.37□□□□□ -1.23
SNHG1-225ENST00000545920 PAPPAQ13219 1627 aa7.37□□□□□ -1.23
SNHG1-225ENST00000545920 KCPQ6ZWJ8 1503 aa7.37□□□□□ -1.23
SNHG1-225ENST00000545920 UBR2Q8IWV8 1755 aa7.36□□□□□ -1.23
SNHG1-225ENST00000545920 DDX60Q8IY21 1712 aaKnown RBP7.36□□□□□ -1.23
SNHG1-225ENST00000545920 ITIH6Q6UXX5 1313 aa7.36□□□□□ -1.23
SNHG1-225ENST00000545920 MROH5Q6ZUA9 1318 aa7.36□□□□□ -1.23
SNHG1-225ENST00000545920 FAM177BA6PVY3 158 aa7.36□□□□□ -1.23
SNHG1-225ENST00000545920 FOXP2O15409 715 aa7.36□□□□□ -1.23
SNHG1-225ENST00000545920 ST8SIA5O15466 376 aa7.36□□□□□ -1.23
SNHG1-225ENST00000545920 ERLIN1O75477 346 aa7.36□□□□□ -1.23
SNHG1-225ENST00000545920 DEXIO95424 95 aa7.36□□□□□ -1.23
SNHG1-225ENST00000545920 POLR3DP05423 398 aaPredicted RBP7.36□□□□□ -1.23
SNHG1-225ENST00000545920 CCDC175P0C221 793 aa7.36□□□□□ -1.23
SNHG1-225ENST00000545920 CCNYL3P0C7X3 344 aa7.36□□□□□ -1.23
SNHG1-225ENST00000545920 CYP2C19P33261 490 aa7.36□□□□□ -1.23
SNHG1-225ENST00000545920 PLCD1P51178 756 aa7.36□□□□□ -1.23
SNHG1-225ENST00000545920 FKBP4Q02790 459 aaKnown RBP eCLIP7.36□□□□□ -1.23
SNHG1-225ENST00000545920 KCNH2Q12809 1159 aa7.36□□□□□ -1.23
SNHG1-225ENST00000545920 SF3B2Q13435 895 aaKnown RBP7.36□□□□□ -1.23
SNHG1-225ENST00000545920 MORC3Q14149 939 aa7.36□□□□□ -1.23
SNHG1-225ENST00000545920 ARID5BQ14865 1188 aa7.36□□□□□ -1.23
SNHG1-225ENST00000545920 POSTNQ15063 836 aa7.36□□□□□ -1.23
SNHG1-225ENST00000545920 FILIP1LQ4L180 1135 aa7.36□□□□□ -1.23
SNHG1-225ENST00000545920 LRRC24Q50LG9 513 aa7.36□□□□□ -1.23
SNHG1-225ENST00000545920 CRTC2Q53ET0 693 aaPredicted RBP7.36□□□□□ -1.23
SNHG1-225ENST00000545920 SHC4Q6S5L8 630 aa7.36□□□□□ -1.23
SNHG1-225ENST00000545920 CNGA4Q8IV77 575 aa7.36□□□□□ -1.23
SNHG1-225ENST00000545920 CRIPAKQ8N1N5 446 aa7.36□□□□□ -1.23
SNHG1-225ENST00000545920 CLP1Q92989 425 aaKnown RBP7.36□□□□□ -1.23
SNHG1-225ENST00000545920 SMARCE1Q969G3 411 aa7.36□□□□□ -1.23
SNHG1-225ENST00000545920 FERMT2Q96AC1 680 aa7.36□□□□□ -1.23
SNHG1-225ENST00000545920 CDCA7Q9BWT1 371 aaPredicted RBP7.36□□□□□ -1.23
SNHG1-225ENST00000545920 NACAP1Q9BZK3 213 aa7.36□□□□□ -1.23
SNHG1-225ENST00000545920 HSD3B7Q9H2F3 369 aa7.36□□□□□ -1.23
SNHG1-225ENST00000545920 ACBD3Q9H3P7 528 aa7.36□□□□□ -1.23
SNHG1-225ENST00000545920 ARFGAP3Q9NP61 516 aa7.36□□□□□ -1.23
SNHG1-225ENST00000545920 CWC15Q9P013 229 aaKnown RBP7.36□□□□□ -1.23
SNHG1-225ENST00000545920 SLAIN2Q9P270 581 aa7.36□□□□□ -1.23
SNHG1-225ENST00000545920 ZHX1Q9UKY1 873 aaPredicted RBP7.36□□□□□ -1.23
SNHG1-225ENST00000545920 TTF2Q9UNY4 1162 aaKnown RBP7.36□□□□□ -1.23
SNHG1-225ENST00000545920 PPP2R2CQ9Y2T4 447 aa7.36□□□□□ -1.23
SNHG1-225ENST00000545920 SRPRBQ9Y5M8 271 aaKnown RBP7.36□□□□□ -1.23
SNHG1-225ENST00000545920 PARP3Q9Y6F1 533 aa7.36□□□□□ -1.23
SNHG1-225ENST00000545920 TJP1Q07157 1748 aa7.35□□□□□ -1.23
SNHG1-225ENST00000545920 SPATA31A3Q5VYP0 1347 aa7.35□□□□□ -1.23
SNHG1-225ENST00000545920 PNPLA7Q6ZV29 1317 aa7.35□□□□□ -1.23
SNHG1-225ENST00000545920 A0A1B0GTH6 734 aa7.35□□□□□ -1.23
SNHG1-225ENST00000545920 ERICH2A1L162 156 aa7.35□□□□□ -1.23
SNHG1-225ENST00000545920 ANKRD18BA2A2Z9 1011 aa7.35□□□□□ -1.23
SNHG1-225ENST00000545920 GOLGA8AA7E2F4 631 aa7.35□□□□□ -1.23
SNHG1-225ENST00000545920 ERVV-1B6SEH8 477 aa7.35□□□□□ -1.23
SNHG1-225ENST00000545920 KIF28PB7ZC32 967 aa7.35□□□□□ -1.23
SNHG1-225ENST00000545920 USP17L15C9J2P7 530 aa7.35□□□□□ -1.23
SNHG1-225ENST00000545920 USP17L10C9JJH3 530 aa7.35□□□□□ -1.23
SNHG1-225ENST00000545920 USP17L13C9JLJ4 530 aa7.35□□□□□ -1.23
SNHG1-225ENST00000545920 USP17L12C9JPN9 530 aa7.35□□□□□ -1.23
SNHG1-225ENST00000545920 USP17L11C9JVI0 530 aa7.35□□□□□ -1.23
SNHG1-225ENST00000545920 USP17L21D6R901 530 aa7.35□□□□□ -1.23
SNHG1-225ENST00000545920 USP17L18D6R9N7 530 aa7.35□□□□□ -1.23
SNHG1-225ENST00000545920 USP17L22D6RA61 530 aa7.35□□□□□ -1.23
SNHG1-225ENST00000545920 USP17L17D6RBQ6 530 aa7.35□□□□□ -1.23
SNHG1-225ENST00000545920 USP17L19D6RCP7 530 aa7.35□□□□□ -1.23
SNHG1-225ENST00000545920 USP17L20D6RJB6 530 aa7.35□□□□□ -1.23
SNHG1-225ENST00000545920 WDHD1O75717 1129 aaPredicted RBP7.35□□□□□ -1.23
SNHG1-225ENST00000545920 EIF3JO75822 258 aaKnown RBP7.35□□□□□ -1.23
SNHG1-225ENST00000545920 STARD3NLO95772 234 aa7.35□□□□□ -1.23
SNHG1-225ENST00000545920 MMP1P03956 469 aa7.35□□□□□ -1.23
SNHG1-225ENST00000545920 TXLNAP40222 546 aa7.35□□□□□ -1.23
SNHG1-225ENST00000545920 USP5P45974 858 aa7.35□□□□□ -1.23
SNHG1-225ENST00000545920 GUCY1B3Q02153 619 aa7.35□□□□□ -1.23
SNHG1-225ENST00000545920 USP17L24Q0WX57 530 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms